RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C APQ12P40532 138 aa1.29□□□□□ -2.2
SPC24YMR117C RCF2P53721 224 aa1.29□□□□□ -2.2
SPC24YMR117C YPD1Q07688 167 aa1.29□□□□□ -2.2
SPC24YMR117C SLM6P38343 150 aa1.28□□□□□ -2.2
SPC24YMR117C FIP1P45976 327 aa1.28□□□□□ -2.2
SPC24YMR117C HHY1P39982 102 aa1.27□□□□□ -2.21
SPC24YMR117C YNL122CP53921 115 aaPredicted RBP1.27□□□□□ -2.21
SPC24YMR117C YOR072WQ08486 104 aa1.27□□□□□ -2.21
SPC24YMR117C YPR202WQ08993 238 aa1.27□□□□□ -2.21
SPC24YMR117C ATG8P38182 117 aaRIP-Chip data1.26□□□□□ -2.21not detected
SPC24YMR117C IPT1P38954 527 aa1.26□□□□□ -2.21
SPC24YMR117C RFU1Q08003 200 aa1.25□□□□□ -2.21
SPC24YMR117C HAP2P06774 265 aa1.24□□□□□ -2.21
SPC24YMR117C PBI2P0CT04 75 aaKnown RBP1.24□□□□□ -2.21
SPC24YMR117C PEX34P25584 144 aa1.24□□□□□ -2.21
SPC24YMR117C SRP21P32342 167 aa1.24□□□□□ -2.21
SPC24YMR117C AME1P38313 324 aa1.24□□□□□ -2.21
SPC24YMR117C IRC19Q07843 230 aa1.24□□□□□ -2.21
SPC24YMR117C ROM2P51862 1356 aaKnown RBP1.23□□□□□ -2.21
SPC24YMR117C YER181CP40097 107 aa1.23□□□□□ -2.21
SPC24YMR117C ATP19P81451 68 aa1.23□□□□□ -2.21
SPC24YMR117C NSL1Q12143 216 aa1.23□□□□□ -2.21
SPC24YMR117C BUB2P26448 306 aaPredicted RBP1.22□□□□□ -2.21
SPC24YMR117C RRT7Q07829 113 aa1.22□□□□□ -2.21
SPC24YMR117C EFG1Q3E705 233 aaKnown RBP1.22□□□□□ -2.21
SPC24YMR117C HSL1P34244 1518 aa1.21□□□□□ -2.22
SPC24YMR117C RPS22AP0C0W1 130 aaKnown RBP1.21□□□□□ -2.22
SPC24YMR117C RPS28BP0C0X0 67 aaKnown RBP1.21□□□□□ -2.22
SPC24YMR117C PHO13P19881 312 aa1.21□□□□□ -2.22
SPC24YMR117C SED1Q01589 338 aa1.21□□□□□ -2.22
SPC24YMR117C MGR2Q02889 113 aa1.21□□□□□ -2.22
SPC24YMR117C RPS28AQ3E7X9 67 aaPredicted RBP1.21□□□□□ -2.22
SPC24YMR117C RPS22BQ3E7Y3 130 aaKnown RBP1.21□□□□□ -2.22
SPC24YMR117C YPR153WQ06537 140 aa1.2□□□□□ -2.22
SPC24YMR117C RIB3Q99258 208 aa1.2□□□□□ -2.22
SPC24YMR117C SEN15Q04675 128 aa1.19□□□□□ -2.22
SPC24YMR117C RPL33AP05744 107 aaKnown RBP1.18□□□□□ -2.22
SPC24YMR117C MRPL24P36525 258 aaPredicted RBP1.18□□□□□ -2.22
SPC24YMR117C DER1P38307 211 aa1.18□□□□□ -2.22
SPC24YMR117C GPI11Q06636 219 aa1.18□□□□□ -2.22
SPC24YMR117C YJL218WP40892 196 aaKnown RBP1.17□□□□□ -2.22
SPC24YMR117C GPI2P46961 280 aa1.17□□□□□ -2.22
SPC24YMR117C SCS22Q6Q595 175 aa1.17□□□□□ -2.22
SPC24YMR117C NHP6AP11632 93 aaKnown RBP1.15□□□□□ -2.23
SPC24YMR117C DDR48P18899 430 aaKnown RBP1.15□□□□□ -2.23
SPC24YMR117C VMA10P48836 114 aaKnown RBP1.15□□□□□ -2.23
SPC24YMR117C PRM3Q08931 133 aa1.15□□□□□ -2.23
SPC24YMR117C CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
SPC24YMR117C PRP8P33334 2413 aaKnown RBP1.13□□□□□ -2.23
SPC24YMR117C YMR141CP40211 102 aa1.11□□□□□ -2.23
SPC24YMR117C IRC21Q04772 201 aa1.11□□□□□ -2.23
SPC24YMR117C YJL009WP47078 108 aa1.1□□□□□ -2.23
SPC24YMR117C DIE2P50076 525 aa1.1□□□□□ -2.23
SPC24YMR117C EST3Q03096 181 aa1.1□□□□□ -2.23
SPC24YMR117C MHF1Q3E835 90 aa1.1□□□□□ -2.23
SPC24YMR117C RME1P32338 300 aaKnown RBP1.09□□□□□ -2.23
SPC24YMR117C TLG1Q03322 224 aa1.09□□□□□ -2.23
SPC24YMR117C COX5BP00425 151 aa1.08□□□□□ -2.24
SPC24YMR117C YGL014C-AP0C5N1 53 aa1.08□□□□□ -2.24
SPC24YMR117C SRL3P36167 246 aa1.08□□□□□ -2.24
SPC24YMR117C FIG1P38224 298 aa1.08□□□□□ -2.24
SPC24YMR117C HUT1Q12520 339 aa1.08□□□□□ -2.24
SPC24YMR117C UBR1P19812 1950 aa1.07□□□□□ -2.24
SPC24YMR117C HSP12P22943 109 aaKnown RBP1.06□□□□□ -2.24
SPC24YMR117C RPL43AP0CX25 92 aaKnown RBP1.05□□□□□ -2.24
SPC24YMR117C RPL43BP0CX26 92 aa1.05□□□□□ -2.24
SPC24YMR117C PET20Q99373 253 aa1.05□□□□□ -2.24
SPC24YMR117C YHR140WP38842 239 aa1.04□□□□□ -2.24
SPC24YMR117C FYV5P25585 152 aa1.03□□□□□ -2.24
SPC24YMR117C YCL001W-AP87012 153 aa1.03□□□□□ -2.24
SPC24YMR117C YMR122CQ03879 124 aa1.03□□□□□ -2.24
SPC24YMR117C RAV2Q03956 351 aa1.03□□□□□ -2.24
SPC24YMR117C RPS1BP23248 255 aaKnown RBP1.01□□□□□ -2.25
SPC24YMR117C YNL019CP53975 284 aa1.01□□□□□ -2.25
SPC24YMR117C KTI11Q3E840 82 aa1.01□□□□□ -2.25
SPC24YMR117C PKR1Q03880 122 aaKnown RBP1□□□□□ -2.25
SPC24YMR117C COA6Q3E846 104 aa0.99□□□□□ -2.25
SPC24YMR117C YGR201CP42936 225 aa0.98□□□□□ -2.25
SPC24YMR117C MVB12P42939 101 aa0.98□□□□□ -2.25
SPC24YMR117C LST8P41318 303 aa0.97□□□□□ -2.25
SPC24YMR117C SOM1Q05676 74 aa0.97□□□□□ -2.25
SPC24YMR117C YLR307C-AQ3E825 87 aa0.97□□□□□ -2.25
SPC24YMR117C ANB1P19211 157 aa0.96□□□□□ -2.26
SPC24YMR117C IPI1P38803 334 aaPredicted RBP0.96□□□□□ -2.26
SPC24YMR117C PHB1P40961 287 aa0.96□□□□□ -2.26
SPC24YMR117C RAF1Q06891 181 aa0.96□□□□□ -2.26
SPC24YMR117C SUI1P32911 108 aaKnown RBP0.95□□□□□ -2.26
SPC24YMR117C LSM1P47017 172 aaKnown RBP0.95□□□□□ -2.26
SPC24YMR117C NMT1P14743 455 aa0.94□□□□□ -2.26
SPC24YMR117C NAT5Q08689 176 aa0.94□□□□□ -2.26
SPC24YMR117C DDP1Q99321 188 aaKnown RBP0.94□□□□□ -2.26
SPC24YMR117C YOR1P53049 1477 aa0.93□□□□□ -2.26
SPC24YMR117C YHR213WP0CI67 198 aa0.93□□□□□ -2.26
SPC24YMR117C PET54P10834 293 aa0.93□□□□□ -2.26
SPC24YMR117C COA4Q05809 96 aa0.93□□□□□ -2.26
SPC24YMR117C FUN14P18411 198 aa0.92□□□□□ -2.26
SPC24YMR117C LSM8P47093 109 aaKnown RBP0.92□□□□□ -2.26
SPC24YMR117C MOG1P47123 218 aa0.92□□□□□ -2.26
SPC24YMR117C HUG1Q6Q5K6 68 aa0.92□□□□□ -2.26
SPC24YMR117C YLR157W-EP0CF00 54 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms