RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C YBL010CP32788 280 aa1.79□□□□□ -2.12
VPS9YML097C SHB17P36136 271 aaKnown RBP1.79□□□□□ -2.12
VPS9YML097C RCF2P53721 224 aa1.79□□□□□ -2.12
VPS9YML097C IGO1P53897 168 aa1.79□□□□□ -2.12
VPS9YML097C TIM8P57744 87 aa1.79□□□□□ -2.12
VPS9YML097C KEI1Q06346 221 aa1.79□□□□□ -2.12
VPS9YML097C YNL277W-AQ3E7Z0 62 aa1.79□□□□□ -2.12
VPS9YML097C FAS1P07149 2051 aaKnown RBP1.79□□□□□ -2.12
VPS9YML097C YCL042WP25572 119 aa1.78□□□□□ -2.12
VPS9YML097C FLX1P40464 311 aa1.78□□□□□ -2.12
VPS9YML097C GLC8P41818 229 aa1.78□□□□□ -2.12
VPS9YML097C EMC4P53073 190 aa1.78□□□□□ -2.12
VPS9YML097C ATP19P81451 68 aa1.78□□□□□ -2.12
VPS9YML097C RPS25BP0C0T4 108 aaKnown RBP1.77□□□□□ -2.13
VPS9YML097C YEL008WP40001 126 aa1.77□□□□□ -2.13
VPS9YML097C YNL019CP53975 284 aa1.77□□□□□ -2.13
VPS9YML097C NMA1Q06178 401 aaKnown RBP1.77□□□□□ -2.13
VPS9YML097C IRC19Q07843 230 aa1.77□□□□□ -2.13
VPS9YML097C RPS25AQ3E792 108 aaPredicted RBP1.77□□□□□ -2.13
VPS9YML097C FMP49A0A023PZB3 126 aa1.76□□□□□ -2.13
VPS9YML097C YGL010WP25338 174 aa1.76□□□□□ -2.13
VPS9YML097C ETR1P38071 380 aa1.76□□□□□ -2.13
VPS9YML097C TRS20P38334 175 aa1.76□□□□□ -2.13
VPS9YML097C HPM1P40481 377 aa1.76□□□□□ -2.13
VPS9YML097C YAE1P47118 141 aaPredicted RBP1.76□□□□□ -2.13
VPS9YML097C BAT2P47176 376 aaKnown RBP1.76□□□□□ -2.13
VPS9YML097C SPG1P50088 95 aa1.76□□□□□ -2.13
VPS9YML097C CWC27Q02770 301 aa1.76□□□□□ -2.13
VPS9YML097C MZM1Q03429 123 aaPredicted RBP1.76□□□□□ -2.13
VPS9YML097C YMR252CQ04814 134 aa1.76□□□□□ -2.13
VPS9YML097C SLO1Q3E784 85 aa1.76□□□□□ -2.13
VPS9YML097C SCS22Q6Q595 175 aa1.76□□□□□ -2.13
VPS9YML097C RAD50P12753 1312 aa1.76□□□□□ -2.13
VPS9YML097C FPR1P20081 114 aaKnown RBP1.75□□□□□ -2.13
VPS9YML097C HSP150P32478 413 aa1.75□□□□□ -2.13
VPS9YML097C YEL014CP39999 101 aa1.75□□□□□ -2.13
VPS9YML097C YPR153WQ06537 140 aa1.75□□□□□ -2.13
VPS9YML097C DDP1Q99321 188 aaKnown RBP1.75□□□□□ -2.13
VPS9YML097C UBR1P19812 1950 aa1.75□□□□□ -2.13
VPS9YML097C RPL14AP36105 138 aaKnown RBP1.74□□□□□ -2.13
VPS9YML097C RPL14BP38754 138 aaKnown RBP1.74□□□□□ -2.13
VPS9YML097C APS3P47064 194 aa1.74□□□□□ -2.13
VPS9YML097C CNL1Q06333 122 aa1.74□□□□□ -2.13
VPS9YML097C ATP14Q12349 124 aa1.74□□□□□ -2.13
VPS9YML097C CMC4Q3E7A9 73 aa1.74□□□□□ -2.13
VPS9YML097C TAR1Q8TGM6 124 aa1.74□□□□□ -2.13
VPS9YML097C SFT1P43682 97 aa1.73□□□□□ -2.13
VPS9YML097C ECM5Q03214 1411 aa1.73□□□□□ -2.13
VPS9YML097C TMA23Q03525 211 aa1.73□□□□□ -2.13
VPS9YML097C SOM1Q05676 74 aa1.73□□□□□ -2.13
VPS9YML097C IPT1P38954 527 aa1.72□□□□□ -2.13
VPS9YML097C YOR385WQ08909 290 aa1.72□□□□□ -2.13
VPS9YML097C HUT1Q12520 339 aa1.72□□□□□ -2.13
VPS9YML097C Q0144Q9ZZW2 109 aa1.72□□□□□ -2.13
VPS9YML097C COX5BP00425 151 aa1.72□□□□□ -2.13
VPS9YML097C RPS1BP23248 255 aaKnown RBP1.72□□□□□ -2.13
VPS9YML097C YHL042WP38729 150 aa1.72□□□□□ -2.13
VPS9YML097C LSM8P47093 109 aaKnown RBP1.72□□□□□ -2.13
VPS9YML097C DIE2P50076 525 aa1.72□□□□□ -2.13
VPS9YML097C YGR017WP53210 297 aa1.72□□□□□ -2.13
VPS9YML097C ELC1Q03071 99 aa1.72□□□□□ -2.13
VPS9YML097C RAF1Q06891 181 aa1.72□□□□□ -2.13
VPS9YML097C COA3Q3E7B2 85 aa1.72□□□□□ -2.13
VPS9YML097C FYV5P25585 152 aa1.71□□□□□ -2.14
VPS9YML097C PHS1P40857 217 aa1.71□□□□□ -2.14
VPS9YML097C SDH7Q04401 133 aa1.71□□□□□ -2.14
VPS9YML097C HSL1P34244 1518 aa1.7□□□□□ -2.14
VPS9YML097C YCR050CP25630 102 aa1.7□□□□□ -2.14
VPS9YML097C HYM1P32464 399 aa1.7□□□□□ -2.14
VPS9YML097C YKR070WP36151 352 aaKnown RBP1.7□□□□□ -2.14
VPS9YML097C ECM31P38122 312 aa1.7□□□□□ -2.14
VPS9YML097C GAT4P40569 121 aa1.7□□□□□ -2.14
VPS9YML097C RPO41P13433 1351 aaKnown RBP1.69□□□□□ -2.14
VPS9YML097C PRE1P22141 198 aaKnown RBP1.69□□□□□ -2.14
VPS9YML097C NKP2Q06162 153 aa1.69□□□□□ -2.14
VPS9YML097C YHR212W-AP0CX91 67 aa1.68□□□□□ -2.14
VPS9YML097C MRP49P32388 137 aa1.68□□□□□ -2.14
VPS9YML097C SFT2P38166 215 aa1.68□□□□□ -2.14
VPS9YML097C YFL065CP43539 102 aa1.68□□□□□ -2.14
VPS9YML097C TVP18Q04767 167 aa1.68□□□□□ -2.14
VPS9YML097C FRQ1Q06389 190 aa1.68□□□□□ -2.14
VPS9YML097C CYR1P08678 2026 aaKnown RBP1.67□□□□□ -2.14
VPS9YML097C QCR10P37299 77 aa1.67□□□□□ -2.14
VPS9YML097C VMA7P39111 118 aa1.67□□□□□ -2.14
VPS9YML097C YCL001W-AP87012 153 aa1.67□□□□□ -2.14
VPS9YML097C FIT1Q04433 528 aa1.67□□□□□ -2.14
VPS9YML097C SPC24Q04477 213 aa1.67□□□□□ -2.14
VPS9YML097C GPI11Q06636 219 aa1.67□□□□□ -2.14
VPS9YML097C MYO2P19524 1574 aaKnown RBP1.67□□□□□ -2.14
VPS9YML097C KIN28P06242 306 aa1.66□□□□□ -2.14
VPS9YML097C RPS1AP33442 255 aaKnown RBP1.66□□□□□ -2.14
VPS9YML097C YAL064WP39711 94 aa1.66□□□□□ -2.14
VPS9YML097C VAM10Q08474 114 aa1.66□□□□□ -2.14
VPS9YML097C YLR118CQ12354 227 aa1.66□□□□□ -2.14
VPS9YML097C UBR2Q07963 1872 aa1.65□□□□□ -2.14
VPS9YML097C MRPL44P19956 98 aa1.65□□□□□ -2.15
VPS9YML097C BRP1P53194 125 aa1.65□□□□□ -2.15
VPS9YML097C HYP2P23301 157 aaKnown RBP1.64□□□□□ -2.15
VPS9YML097C YBR242WP38331 238 aa1.64□□□□□ -2.15
VPS9YML097C YFL051CP43552 160 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms