RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W YIP3P53633 176 aa-0.29□□□□□ -2.46
PRP39YML046W YNR077CP53758 84 aa-0.29□□□□□ -2.46
PRP39YML046W ERI1P62651 68 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W GMC2Q06201 188 aa-0.29□□□□□ -2.46
PRP39YML046W GPN3Q06543 272 aa-0.29□□□□□ -2.46
PRP39YML046W COQ10Q08058 207 aa-0.29□□□□□ -2.46
PRP39YML046W MDY2Q12285 212 aa-0.29□□□□□ -2.46
PRP39YML046W MHF2Q3E829 80 aa-0.29□□□□□ -2.46
PRP39YML046W YHR073W-AP0C5N7 58 aa-0.3□□□□□ -2.46
PRP39YML046W MER1P16523 270 aa-0.3□□□□□ -2.46
PRP39YML046W SAR1P20606 190 aaKnown RBP-0.3□□□□□ -2.46
PRP39YML046W TRX3P25372 127 aa-0.3□□□□□ -2.46
PRP39YML046W JEN1P36035 616 aa-0.3□□□□□ -2.46
PRP39YML046W YHL042WP38729 150 aa-0.3□□□□□ -2.46
PRP39YML046W SNF11P38956 169 aa-0.3□□□□□ -2.46
PRP39YML046W YIL102CP40488 101 aa-0.3□□□□□ -2.46
PRP39YML046W DOC1P53068 250 aa-0.3□□□□□ -2.46
PRP39YML046W CUS2P53830 285 aaPredicted RBP-0.3□□□□□ -2.46
PRP39YML046W RTC4P53850 401 aa-0.3□□□□□ -2.46
PRP39YML046W YLR173WQ06247 608 aa-0.3□□□□□ -2.46
PRP39YML046W GET4Q12125 312 aa-0.3□□□□□ -2.46
PRP39YML046W CCW12Q12127 133 aa-0.3□□□□□ -2.46
PRP39YML046W YLR157W-EP0CF00 54 aa-0.31□□□□□ -2.46
PRP39YML046W TPM1P17536 199 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W IDH1P28834 360 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
PRP39YML046W AHT1P29589 182 aa-0.31□□□□□ -2.46
PRP39YML046W YKL070WP36087 169 aa-0.31□□□□□ -2.46
PRP39YML046W PAN3P36102 679 aaPredicted RBP-0.31□□□□□ -2.46
PRP39YML046W MNN9P39107 395 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W PEX17P40155 199 aa-0.31□□□□□ -2.46
PRP39YML046W MRX5P47007 382 aa-0.31□□□□□ -2.46
PRP39YML046W ARP3P47117 449 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W YJR111CP47148 283 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W PAC10P48363 199 aa-0.31□□□□□ -2.46
PRP39YML046W ARO8P53090 500 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W NOP19P53317 196 aaPredicted RBP-0.31□□□□□ -2.46
PRP39YML046W CWC27Q02770 301 aa-0.31□□□□□ -2.46
PRP39YML046W YMR320WQ04897 101 aa-0.31□□□□□ -2.46
PRP39YML046W RFU1Q08003 200 aa-0.31□□□□□ -2.46
PRP39YML046W HUT1Q12520 339 aa-0.31□□□□□ -2.46
PRP39YML046W YDR157WA0A023PZE8 133 aa-0.31□□□□□ -2.46
PRP39YML046W PHO13P19881 312 aa-0.31□□□□□ -2.46
PRP39YML046W ATG22P25568 528 aa-0.31□□□□□ -2.46
PRP39YML046W YCR099CP25657 155 aa-0.31□□□□□ -2.46
PRP39YML046W PPA2P28239 310 aa-0.31□□□□□ -2.46
PRP39YML046W QRI5P32344 111 aa-0.31□□□□□ -2.46
PRP39YML046W YBR063CP38083 404 aa-0.31□□□□□ -2.46
PRP39YML046W OPY1P38271 328 aa-0.31□□□□□ -2.46
PRP39YML046W AIM4P38305 123 aaPredicted RBP-0.31□□□□□ -2.46
PRP39YML046W SLM6P38343 150 aa-0.31□□□□□ -2.46
PRP39YML046W RPF1P38805 295 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W HHY1P39982 102 aa-0.31□□□□□ -2.46
PRP39YML046W YEL008WP40001 126 aa-0.31□□□□□ -2.46
PRP39YML046W COA1P40452 197 aa-0.31□□□□□ -2.46
PRP39YML046W POR2P40478 281 aa-0.31□□□□□ -2.46
PRP39YML046W HYR1P40581 163 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W ERJ5P43613 295 aaPredicted RBP-0.31□□□□□ -2.46
PRP39YML046W KNH1P50112 268 aa-0.31□□□□□ -2.46
PRP39YML046W YNL033WP53964 284 aa-0.31□□□□□ -2.46
PRP39YML046W YNL010WP53981 241 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W SRL4Q03085 281 aa-0.31□□□□□ -2.46
PRP39YML046W OST6Q03723 332 aa-0.31□□□□□ -2.46
PRP39YML046W YMR252CQ04814 134 aa-0.31□□□□□ -2.46
PRP39YML046W BER1Q06688 274 aaKnown RBP-0.31□□□□□ -2.46
PRP39YML046W SME1Q12330 94 aaPredicted RBP-0.31□□□□□ -2.46
PRP39YML046W COA3Q3E7B2 85 aa-0.31□□□□□ -2.46
PRP39YML046W RIB3Q99258 208 aa-0.31□□□□□ -2.46
PRP39YML046W PET18P25362 215 aa-0.32□□□□□ -2.46
PRP39YML046W KRR1P25586 316 aaPredicted RBP-0.32□□□□□ -2.46
PRP39YML046W HSP30P25619 332 aa-0.32□□□□□ -2.46
PRP39YML046W TRR1P29509 319 aaKnown RBP-0.32□□□□□ -2.46
PRP39YML046W SSO1P32867 290 aa-0.32□□□□□ -2.46
PRP39YML046W CPR5P35176 225 aa-0.32□□□□□ -2.46
PRP39YML046W BLI1P35727 113 aa-0.32□□□□□ -2.46
PRP39YML046W END3P39013 349 aa-0.32□□□□□ -2.46
PRP39YML046W YAR064WP39563 99 aa-0.32□□□□□ -2.46
PRP39YML046W MTW1P39731 289 aa-0.32□□□□□ -2.46
PRP39YML046W SSO2P39926 295 aa-0.32□□□□□ -2.46
PRP39YML046W LOC1P43586 204 aaPredicted RBP-0.32□□□□□ -2.46
PRP39YML046W GPI2P46961 280 aa-0.32□□□□□ -2.46
PRP39YML046W LOH1P47055 219 aa-0.32□□□□□ -2.46
PRP39YML046W THG1P53215 237 aaKnown RBP-0.32□□□□□ -2.46
PRP39YML046W YGR164WP53291 111 aa-0.32□□□□□ -2.46
PRP39YML046W YNL140CP53910 189 aa-0.32□□□□□ -2.46
PRP39YML046W MET31Q03081 177 aa-0.32□□□□□ -2.46
PRP39YML046W YLR413WQ06689 675 aa-0.32□□□□□ -2.46
PRP39YML046W YOR186WQ08560 144 aa-0.32□□□□□ -2.46
PRP39YML046W YPR203WQ08994 102 aa-0.32□□□□□ -2.46
PRP39YML046W YHR213W-BQ8TGK1 99 aa-0.32□□□□□ -2.46
PRP39YML046W COX5BP00425 151 aa-0.33□□□□□ -2.46
PRP39YML046W YOL013W-AP0C272 63 aaPredicted RBP-0.33□□□□□ -2.46
PRP39YML046W FZO1P38297 855 aa-0.33□□□□□ -2.46
PRP39YML046W RRF1P38771 230 aa-0.33□□□□□ -2.46
PRP39YML046W FMP33P46998 180 aa-0.33□□□□□ -2.46
PRP39YML046W BRR6P53062 197 aa-0.33□□□□□ -2.46
PRP39YML046W YPD1Q07688 167 aa-0.33□□□□□ -2.46
PRP39YML046W SYC1Q08553 188 aaPredicted RBP-0.33□□□□□ -2.46
PRP39YML046W ATG41Q12048 136 aa-0.33□□□□□ -2.46
PRP39YML046W YOR192C-CQ3E736 78 aa-0.33□□□□□ -2.46
PRP39YML046W ODC2Q99297 307 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 83.9 ms