RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C YLR296WQ05898 108 aa3.4□□□□□ -1.87
ECM22YLR228C HPA2Q06592 156 aa3.4□□□□□ -1.87
ECM22YLR228C GEP3Q08622 556 aa3.4□□□□□ -1.87
ECM22YLR228C GCN1P33892 2672 aaKnown RBP3.4□□□□□ -1.87
ECM22YLR228C VMA11P32842 164 aa3.39□□□□□ -1.87
ECM22YLR228C FRM2P37261 193 aa3.39□□□□□ -1.87
ECM22YLR228C YGR269WP40326 108 aa3.39□□□□□ -1.87
ECM22YLR228C KNH1P50112 268 aa3.39□□□□□ -1.87
ECM22YLR228C WSC2P53832 503 aa3.39□□□□□ -1.87
ECM22YLR228C YPQ1Q12010 308 aa3.39□□□□□ -1.87
ECM22YLR228C YLR302CO13544 120 aa3.39□□□□□ -1.87
ECM22YLR228C OPI3P05375 206 aa3.39□□□□□ -1.87
ECM22YLR228C RAD6P06104 172 aa3.39□□□□□ -1.87
ECM22YLR228C MSI1P13712 422 aa3.39□□□□□ -1.87
ECM22YLR228C ARF2P19146 181 aaKnown RBP3.39□□□□□ -1.87
ECM22YLR228C YDL186WP48568 277 aa3.39□□□□□ -1.87
ECM22YLR228C PET191Q02772 108 aa3.39□□□□□ -1.87
ECM22YLR228C OPI10Q08202 246 aa3.39□□□□□ -1.87
ECM22YLR228C YPL264CQ08980 353 aa3.39□□□□□ -1.87
ECM22YLR228C FCY1Q12178 158 aa3.39□□□□□ -1.87
ECM22YLR228C YPR053CQ6Q5F3 151 aa3.39□□□□□ -1.87
ECM22YLR228C RPL23AP0CX41 137 aaKnown RBP3.38□□□□□ -1.87
ECM22YLR228C RPL23BP0CX42 137 aaKnown RBP3.38□□□□□ -1.87
ECM22YLR228C QRI5P32344 111 aa3.38□□□□□ -1.87
ECM22YLR228C SPC29P33419 253 aa3.38□□□□□ -1.87
ECM22YLR228C PAD1P33751 242 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
ECM22YLR228C YJL193WP39542 402 aa3.38□□□□□ -1.87
ECM22YLR228C CCS1P40202 249 aaKnown RBP3.38□□□□□ -1.87
ECM22YLR228C DSK2P48510 373 aa3.38□□□□□ -1.87
ECM22YLR228C GEP7P53171 287 aa3.38□□□□□ -1.87
ECM22YLR228C BRP1P53194 125 aa3.38□□□□□ -1.87
ECM22YLR228C YMR178WQ03219 274 aaKnown RBP3.38□□□□□ -1.87
ECM22YLR228C MRPL1Q04599 285 aa3.38□□□□□ -1.87
ECM22YLR228C MRPL51Q06090 140 aaPredicted RBP3.38□□□□□ -1.87
ECM22YLR228C IRC25Q07951 179 aa3.38□□□□□ -1.87
ECM22YLR228C MCH4Q08268 501 aa3.38□□□□□ -1.87
ECM22YLR228C YOR292CQ08743 309 aa3.38□□□□□ -1.87
ECM22YLR228C YDR215CQ12240 137 aa3.38□□□□□ -1.87
ECM22YLR228C POM34Q12445 299 aa3.38□□□□□ -1.87
ECM22YLR228C HUG1Q6Q5K6 68 aa3.38□□□□□ -1.87
ECM22YLR228C RPS28BP0C0X0 67 aaKnown RBP3.38□□□□□ -1.87
ECM22YLR228C YFR020WP43600 232 aa3.38□□□□□ -1.87
ECM22YLR228C YOR387CQ08910 206 aa3.38□□□□□ -1.87
ECM22YLR228C YDR029WQ12111 104 aa3.38□□□□□ -1.87
ECM22YLR228C YKL023C-AQ2V2P3 75 aa3.38□□□□□ -1.87
ECM22YLR228C RPS28AQ3E7X9 67 aaPredicted RBP3.38□□□□□ -1.87
ECM22YLR228C YSR3P23501 404 aa3.37□□□□□ -1.87
ECM22YLR228C RPB7P34087 171 aa3.37□□□□□ -1.87
ECM22YLR228C MST28P39552 234 aa3.37□□□□□ -1.87
ECM22YLR228C SUN4P53616 420 aa3.37□□□□□ -1.87
ECM22YLR228C YIL014C-AQ02598 104 aa3.37□□□□□ -1.87
ECM22YLR228C PIR1Q03178 341 aa3.37□□□□□ -1.87
ECM22YLR228C YBR255C-AQ3E776 120 aa3.37□□□□□ -1.87
ECM22YLR228C YAL063C-AQ3E791 96 aa3.37□□□□□ -1.87
ECM22YLR228C ENV10Q99382 181 aa3.37□□□□□ -1.87
ECM22YLR228C YMR316C-AI2HB70 103 aa3.36□□□□□ -1.87
ECM22YLR228C RPB8P20436 146 aa3.36□□□□□ -1.87
ECM22YLR228C RPA12P32529 125 aaKnown RBP3.36□□□□□ -1.87
ECM22YLR228C SFT2P38166 215 aa3.36□□□□□ -1.87
ECM22YLR228C YER181CP40097 107 aa3.36□□□□□ -1.87
ECM22YLR228C TPC1P53257 314 aa3.36□□□□□ -1.87
ECM22YLR228C FCF1Q05498 189 aaPredicted RBP3.36□□□□□ -1.87
ECM22YLR228C YDL180WQ12301 547 aa3.36□□□□□ -1.87
ECM22YLR228C HTL1Q9URQ5 78 aa3.36□□□□□ -1.87
ECM22YLR228C CDC39P25655 2108 aaKnown RBP3.36□□□□□ -1.87
ECM22YLR228C UBC5P15732 148 aa3.36□□□□□ -1.87
ECM22YLR228C BET2P20133 325 aa3.36□□□□□ -1.87
ECM22YLR228C RPS2P25443 254 aaKnown RBP3.36□□□□□ -1.87
ECM22YLR228C GZF3P42944 551 aaKnown RBP3.36□□□□□ -1.87
ECM22YLR228C MIX17Q03667 156 aa3.36□□□□□ -1.87
ECM22YLR228C AIM34Q03673 198 aa3.36□□□□□ -1.87
ECM22YLR228C ATG33Q06485 197 aa3.36□□□□□ -1.87
ECM22YLR228C RDL2Q08742 149 aaKnown RBP3.36□□□□□ -1.87
ECM22YLR228C YLR365WQ7LIF2 110 aa3.36□□□□□ -1.87
ECM22YLR228C ECM12O13529 151 aa3.35□□□□□ -1.87
ECM22YLR228C KRE1P17260 313 aa3.35□□□□□ -1.87
ECM22YLR228C YCR085WP25650 117 aa3.35□□□□□ -1.87
ECM22YLR228C APS1P35181 156 aa3.35□□□□□ -1.87
ECM22YLR228C TIF34P40217 347 aaKnown RBP3.35□□□□□ -1.87
ECM22YLR228C CUP9P41817 306 aa3.35□□□□□ -1.87
ECM22YLR228C CUZ1P53899 274 aa3.35□□□□□ -1.87
ECM22YLR228C YFH1Q07540 174 aa3.35□□□□□ -1.87
ECM22YLR228C MRPL23Q12487 163 aaPredicted RBP3.35□□□□□ -1.87
ECM22YLR228C YKL044WP36092 106 aa3.35□□□□□ -1.87
ECM22YLR228C PRS4P38063 326 aaPredicted RBP3.35□□□□□ -1.87
ECM22YLR228C HUA1P40325 198 aa3.35□□□□□ -1.87
ECM22YLR228C RHO5P53879 331 aaKnown RBP3.35□□□□□ -1.87
ECM22YLR228C AQR1P53943 586 aa3.35□□□□□ -1.87
ECM22YLR228C YOL029CQ08187 201 aa3.35□□□□□ -1.87
ECM22YLR228C MSA1Q08471 629 aa3.35□□□□□ -1.87
ECM22YLR228C TIM18Q08749 192 aa3.35□□□□□ -1.87
ECM22YLR228C YRA1Q12159 226 aaKnown RBP3.35□□□□□ -1.87
ECM22YLR228C MPD1Q12404 318 aaKnown RBP3.35□□□□□ -1.87
ECM22YLR228C DFM1Q12743 341 aaKnown RBP3.35□□□□□ -1.87
ECM22YLR228C RPL20AP0CX23 172 aaKnown RBP3.34□□□□□ -1.87
ECM22YLR228C RPL20BP0CX24 172 aaPredicted RBP3.34□□□□□ -1.87
ECM22YLR228C YPL073CP40323 161 aa3.34□□□□□ -1.87
ECM22YLR228C YFR045WP43617 309 aa3.34□□□□□ -1.87
ECM22YLR228C UBC11P52492 156 aa3.34□□□□□ -1.87
ECM22YLR228C CAX4P53223 239 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms