RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C URB1P34241 1764 aaKnown RBP0.85□□□□□ -2.27
SMD3YLR147C MEC1P38111 2368 aa0.85□□□□□ -2.27
SMD3YLR147C YBL010CP32788 280 aa0.85□□□□□ -2.27
SMD3YLR147C RRT1P38192 103 aa0.85□□□□□ -2.27
SMD3YLR147C NSG1P38837 291 aa0.85□□□□□ -2.27
SMD3YLR147C NSE4P43124 402 aa0.85□□□□□ -2.27
SMD3YLR147C RTC4P53850 401 aa0.85□□□□□ -2.27
SMD3YLR147C NRK1P53915 240 aa0.85□□□□□ -2.27
SMD3YLR147C FIT1Q04433 528 aa0.85□□□□□ -2.27
SMD3YLR147C ELP6Q04868 273 aa0.85□□□□□ -2.27
SMD3YLR147C YLR419WQ06698 1435 aaKnown RBP0.85□□□□□ -2.27
SMD3YLR147C CCW12Q12127 133 aa0.85□□□□□ -2.27
SMD3YLR147C RIM15P43565 1770 aa0.84□□□□□ -2.27
SMD3YLR147C TAH1P25638 111 aaPredicted RBP0.84□□□□□ -2.27
SMD3YLR147C SBH1P52870 82 aa0.84□□□□□ -2.27
SMD3YLR147C GIM3P53900 129 aa0.84□□□□□ -2.27
SMD3YLR147C FIG2P25653 1609 aa0.84□□□□□ -2.28
SMD3YLR147C APA2P22108 325 aa0.83□□□□□ -2.28
SMD3YLR147C GAL83Q04739 417 aa0.83□□□□□ -2.28
SMD3YLR147C YOR097CQ12274 175 aaPredicted RBP0.83□□□□□ -2.28
SMD3YLR147C YDL085C-AQ3E7B7 68 aaKnown RBP0.83□□□□□ -2.28
SMD3YLR147C DML1Q03652 475 aa0.82□□□□□ -2.28
SMD3YLR147C YPR014CQ6B0W2 109 aa0.82□□□□□ -2.28
SMD3YLR147C ADE6P38972 1358 aaKnown RBP0.82□□□□□ -2.28
SMD3YLR147C MAK31P23059 88 aa0.81□□□□□ -2.28
SMD3YLR147C MOB1P40484 314 aa0.81□□□□□ -2.28
SMD3YLR147C DCV1P43595 202 aa0.81□□□□□ -2.28
SMD3YLR147C HOP2P53187 214 aa0.81□□□□□ -2.28
SMD3YLR147C AIM34Q03673 198 aa0.81□□□□□ -2.28
SMD3YLR147C ATG38Q05789 226 aaKnown RBP0.81□□□□□ -2.28
SMD3YLR147C NOC4Q06512 552 aaPredicted RBP0.81□□□□□ -2.28
SMD3YLR147C DGK1Q12382 290 aa0.81□□□□□ -2.28
SMD3YLR147C YMR030W-AQ3E760 96 aa0.81□□□□□ -2.28
SMD3YLR147C APC1P53886 1748 aa0.81□□□□□ -2.28
SMD3YLR147C CAF4P36130 643 aa0.8□□□□□ -2.28
SMD3YLR147C SBH2P52871 88 aa0.8□□□□□ -2.28
SMD3YLR147C ATG41Q12048 136 aa0.8□□□□□ -2.28
SMD3YLR147C MPD1Q12404 318 aaKnown RBP0.8□□□□□ -2.28
SMD3YLR147C YOR381W-AQ3E804 55 aa0.8□□□□□ -2.28
SMD3YLR147C SAC3P46674 1301 aa0.8□□□□□ -2.28
SMD3YLR147C GSC2P40989 1895 aa0.8□□□□□ -2.28
SMD3YLR147C FKS3Q04952 1785 aa0.79□□□□□ -2.28
SMD3YLR147C FMP49A0A023PZB3 126 aa0.79□□□□□ -2.28
SMD3YLR147C TRX3P25372 127 aa0.79□□□□□ -2.28
SMD3YLR147C AHC2P25649 128 aa0.79□□□□□ -2.28
SMD3YLR147C YAR064WP39563 99 aa0.79□□□□□ -2.28
SMD3YLR147C CCS1P40202 249 aaKnown RBP0.79□□□□□ -2.28
SMD3YLR147C YIL102CP40488 101 aa0.79□□□□□ -2.28
SMD3YLR147C GRE1Q08969 168 aa0.79□□□□□ -2.28
SMD3YLR147C FAS2P19097 1887 aaKnown RBP0.78□□□□□ -2.28
SMD3YLR147C ATP7P30902 174 aa0.78□□□□□ -2.28
SMD3YLR147C CPR5P35176 225 aa0.78□□□□□ -2.28
SMD3YLR147C SEC72P39742 193 aaKnown RBP0.78□□□□□ -2.28
SMD3YLR147C GRX8Q05926 109 aa0.78□□□□□ -2.28
SMD3YLR147C GCY1P14065 312 aaKnown RBP RIP-Chip data0.77□□□□□ -2.29not detected
SMD3YLR147C SHG1P38337 142 aa0.77□□□□□ -2.29
SMD3YLR147C FYV4P38783 130 aaPredicted RBP0.77□□□□□ -2.29
SMD3YLR147C SNO1Q03144 224 aa0.77□□□□□ -2.29
SMD3YLR147C TLG1Q03322 224 aa0.77□□□□□ -2.29
SMD3YLR147C RIM9Q04734 239 aa0.77□□□□□ -2.29
SMD3YLR147C YNL200CP40165 246 aaKnown RBP0.76□□□□□ -2.29
SMD3YLR147C POG1P40473 351 aa0.76□□□□□ -2.29
SMD3YLR147C YET3Q07451 203 aa0.76□□□□□ -2.29
SMD3YLR147C BRX1Q08235 291 aaKnown RBP0.76□□□□□ -2.29
SMD3YLR147C YIL046W-AQ3E7Z4 54 aa0.76□□□□□ -2.29
SMD3YLR147C TRR1P29509 319 aaKnown RBP0.75□□□□□ -2.29
SMD3YLR147C YKL102CP34249 101 aa0.75□□□□□ -2.29
SMD3YLR147C YKR041WP36134 250 aa0.75□□□□□ -2.29
SMD3YLR147C EGD2P38879 174 aaKnown RBP0.75□□□□□ -2.29
SMD3YLR147C SRP14P38985 146 aa0.75□□□□□ -2.29
SMD3YLR147C FMP32P43557 207 aa0.75□□□□□ -2.29
SMD3YLR147C YIP3P53633 176 aa0.75□□□□□ -2.29
SMD3YLR147C SEC14P24280 304 aaKnown RBP0.74□□□□□ -2.29
SMD3YLR147C HSP30P25619 332 aa0.74□□□□□ -2.29
SMD3YLR147C YRA2P36036 203 aaKnown RBP RIP-Chip data0.74□□□□□ -2.29not detected
SMD3YLR147C SRX1P36077 127 aa0.74□□□□□ -2.29
SMD3YLR147C SHB17P36136 271 aaKnown RBP0.74□□□□□ -2.29
SMD3YLR147C YKR070WP36151 352 aaKnown RBP0.74□□□□□ -2.29
SMD3YLR147C YJR015WP47090 510 aa0.74□□□□□ -2.29
SMD3YLR147C GPI17Q04080 534 aa0.74□□□□□ -2.29
SMD3YLR147C SHH4Q06236 168 aa0.74□□□□□ -2.29
SMD3YLR147C YRF1-3P0CX14 1859 aa0.73□□□□□ -2.29
SMD3YLR147C YRF1-7P0CX15 1859 aa0.73□□□□□ -2.29
SMD3YLR147C YRF1-6P53819 1859 aa0.73□□□□□ -2.29
SMD3YLR147C HFA1P32874 2273 aa0.73□□□□□ -2.29
SMD3YLR147C RPL35AP0CX84 120 aaKnown RBP0.73□□□□□ -2.29
SMD3YLR147C RPL35BP0CX85 120 aaKnown RBP0.73□□□□□ -2.29
SMD3YLR147C PEX34P25584 144 aa0.73□□□□□ -2.29
SMD3YLR147C CLG1P35190 452 aa0.73□□□□□ -2.29
SMD3YLR147C NVJ1P38881 321 aa0.73□□□□□ -2.29
SMD3YLR147C GRX5Q02784 150 aa0.73□□□□□ -2.29
SMD3YLR147C GIM5Q04493 163 aa0.73□□□□□ -2.29
SMD3YLR147C AVO2Q04749 426 aa0.73□□□□□ -2.29
SMD3YLR147C PEX11Q12462 236 aa0.73□□□□□ -2.29
SMD3YLR147C RAD51P25454 400 aa0.72□□□□□ -2.29
SMD3YLR147C RFC2P40348 353 aa0.72□□□□□ -2.29
SMD3YLR147C YMR321CQ04898 105 aa0.72□□□□□ -2.29
SMD3YLR147C CMC2Q3E7A4 109 aa0.72□□□□□ -2.29
SMD3YLR147C PMD1P32634 1753 aa0.72□□□□□ -2.29
SMD3YLR147C RME1P32338 300 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 133.9 ms