RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YHR173CP38864 112 aa9.14□□□□□ -0.95
SPT8YLR055C HAC1P41546 238 aa9.14□□□□□ -0.95
SPT8YLR055C YGL230CP53074 147 aa9.14□□□□□ -0.95
SPT8YLR055C YGL118CP53132 145 aa9.14□□□□□ -0.95
SPT8YLR055C ATP19P81451 68 aa9.14□□□□□ -0.95
SPT8YLR055C COX2P00410 251 aa9.13□□□□□ -0.95
SPT8YLR055C SPS100P13130 326 aa9.13□□□□□ -0.95
SPT8YLR055C HSP12P22943 109 aaKnown RBP9.13□□□□□ -0.95
SPT8YLR055C MTR2P34232 184 aaKnown RBP9.13□□□□□ -0.95
SPT8YLR055C YGP1P38616 354 aaKnown RBP9.13□□□□□ -0.95
SPT8YLR055C GON7P46984 123 aa9.13□□□□□ -0.95
SPT8YLR055C MIC26P50087 233 aa9.13□□□□□ -0.95
SPT8YLR055C YNR064CP53750 290 aa9.13□□□□□ -0.95
SPT8YLR055C YDR114CQ04597 100 aa9.13□□□□□ -0.95
SPT8YLR055C YOS1Q3E834 85 aa9.13□□□□□ -0.95
SPT8YLR055C SEC11P15367 167 aa9.12□□□□□ -0.95
SPT8YLR055C GAR1P28007 205 aaKnown RBP9.12□□□□□ -0.95
SPT8YLR055C YAR068WP39564 161 aa9.12□□□□□ -0.95
SPT8YLR055C YFL054CP43549 646 aa9.12□□□□□ -0.95
SPT8YLR055C COX18P53239 316 aa9.12□□□□□ -0.95
SPT8YLR055C RAV2Q03956 351 aa9.12□□□□□ -0.95
SPT8YLR055C SCS22Q6Q595 175 aa9.12□□□□□ -0.95
SPT8YLR055C PIS1P06197 220 aaKnown RBP9.12□□□□□ -0.95
SPT8YLR055C YPR170W-BP0C5R9 85 aa9.12□□□□□ -0.95
SPT8YLR055C YBR220CP38318 560 aa9.12□□□□□ -0.95
SPT8YLR055C SEC72P39742 193 aaKnown RBP9.12□□□□□ -0.95
SPT8YLR055C SDS23P53172 527 aa9.12□□□□□ -0.95
SPT8YLR055C YNR071CP53757 342 aa9.12□□□□□ -0.95
SPT8YLR055C GIM5Q04493 163 aa9.12□□□□□ -0.95
SPT8YLR055C MSL1P40567 111 aaPredicted RBP9.11□□□□□ -0.95
SPT8YLR055C UPS3Q04006 179 aa9.11□□□□□ -0.95
SPT8YLR055C TIR1P10863 254 aa9.1□□□□□ -0.95
SPT8YLR055C PRE1P22141 198 aaKnown RBP9.1□□□□□ -0.95
SPT8YLR055C YOX1P34161 385 aa9.1□□□□□ -0.95
SPT8YLR055C ICS2P38284 255 aa9.1□□□□□ -0.95
SPT8YLR055C ADH2P00331 348 aaKnown RBP9.1□□□□□ -0.95
SPT8YLR055C HUA1P40325 198 aa9.1□□□□□ -0.95
SPT8YLR055C YDL183CP48569 320 aa9.1□□□□□ -0.95
SPT8YLR055C FIT2Q08906 153 aa9.1□□□□□ -0.95
SPT8YLR055C YBL029C-AQ3E756 94 aa9.1□□□□□ -0.95
SPT8YLR055C ADE8P04161 214 aa9.09□□□□□ -0.95
SPT8YLR055C NOP1P15646 327 aaKnown RBP9.09□□□□□ -0.95
SPT8YLR055C FPR2P32472 135 aa9.09□□□□□ -0.95
SPT8YLR055C RPF1P38805 295 aaKnown RBP9.09□□□□□ -0.95
SPT8YLR055C YNL200CP40165 246 aaKnown RBP9.08□□□□□ -0.96
SPT8YLR055C TOM7P53507 60 aa9.08□□□□□ -0.96
SPT8YLR055C CRZ1P53968 678 aa9.08□□□□□ -0.96
SPT8YLR055C MSC3Q05812 728 aa9.08□□□□□ -0.96
SPT8YLR055C RPL23AP0CX41 137 aaKnown RBP9.08□□□□□ -0.96
SPT8YLR055C RPL23BP0CX42 137 aaKnown RBP9.08□□□□□ -0.96
SPT8YLR055C ARC18Q05933 178 aaKnown RBP9.08□□□□□ -0.96
SPT8YLR055C WIP1Q2V2P8 89 aa9.08□□□□□ -0.96
SPT8YLR055C BRP1P53194 125 aa9.07□□□□□ -0.96
SPT8YLR055C SSU72P53538 206 aaPredicted RBP9.07□□□□□ -0.96
SPT8YLR055C GRH1Q04410 372 aaKnown RBP9.07□□□□□ -0.96
SPT8YLR055C IZH3Q07959 543 aa9.07□□□□□ -0.96
SPT8YLR055C ATO3Q12359 275 aa9.07□□□□□ -0.96
SPT8YLR055C FYV4P38783 130 aaPredicted RBP9.06□□□□□ -0.96
SPT8YLR055C FSF1Q12029 327 aaKnown RBP9.06□□□□□ -0.96
SPT8YLR055C YDR215CQ12240 137 aa9.06□□□□□ -0.96
SPT8YLR055C FZF1P32805 299 aa9.05□□□□□ -0.96
SPT8YLR055C ERS1P17261 260 aa9.05□□□□□ -0.96
SPT8YLR055C SAL1D6W196 494 aa9.04□□□□□ -0.96
SPT8YLR055C FEN2P25621 512 aaKnown RBP9.04□□□□□ -0.96
SPT8YLR055C GZF3P42944 551 aaKnown RBP9.04□□□□□ -0.96
SPT8YLR055C DMA2P53924 522 aa9.04□□□□□ -0.96
SPT8YLR055C MBF1O14467 151 aaKnown RBP9.03□□□□□ -0.96
SPT8YLR055C RPS23AP0CX29 145 aaKnown RBP9.03□□□□□ -0.96
SPT8YLR055C RPS23BP0CX30 145 aa9.03□□□□□ -0.96
SPT8YLR055C SPC29P33419 253 aa9.03□□□□□ -0.96
SPT8YLR055C YKR070WP36151 352 aaKnown RBP9.03□□□□□ -0.96
SPT8YLR055C YPT10P38146 199 aa9.03□□□□□ -0.96
SPT8YLR055C CSH1P38287 376 aa9.03□□□□□ -0.96
SPT8YLR055C DOG2P38773 246 aa9.03□□□□□ -0.96
SPT8YLR055C POP3P53833 195 aaPredicted RBP9.03□□□□□ -0.96
SPT8YLR055C TIM10P87108 93 aa9.03□□□□□ -0.96
SPT8YLR055C MRX11Q03079 207 aa9.03□□□□□ -0.96
SPT8YLR055C DDI2P0CH63 225 aa9.03□□□□□ -0.96
SPT8YLR055C DDI3P0CH64 225 aa9.03□□□□□ -0.96
SPT8YLR055C YFL068WP0CX99 160 aa9.03□□□□□ -0.96
SPT8YLR055C YLL066W-AP0CY00 160 aa9.03□□□□□ -0.96
SPT8YLR055C YLL067W-AP0CY01 160 aa9.03□□□□□ -0.96
SPT8YLR055C MRPL31P14063 131 aaPredicted RBP9.03□□□□□ -0.96
SPT8YLR055C MRP49P32388 137 aa9.03□□□□□ -0.96
SPT8YLR055C ALG14P38242 237 aa9.03□□□□□ -0.96
SPT8YLR055C BDH1P39714 382 aa9.03□□□□□ -0.96
SPT8YLR055C SWT21P53873 357 aaPredicted RBP9.03□□□□□ -0.96
SPT8YLR055C SED1Q01589 338 aa9.03□□□□□ -0.96
SPT8YLR055C DPP1Q05521 289 aa9.03□□□□□ -0.96
SPT8YLR055C GAT3Q07928 141 aa9.03□□□□□ -0.96
SPT8YLR055C YLR050CQ12155 161 aaKnown RBP9.03□□□□□ -0.96
SPT8YLR055C PRY2P36110 329 aa9.02□□□□□ -0.97
SPT8YLR055C YBL071CP38185 102 aa9.02□□□□□ -0.97
SPT8YLR055C LSM2P38203 95 aaKnown RBP9.02□□□□□ -0.97
SPT8YLR055C YJL118WP47022 219 aa9.02□□□□□ -0.97
SPT8YLR055C YTH1Q06102 208 aaPredicted RBP9.02□□□□□ -0.97
SPT8YLR055C YLR363W-AQ3E747 85 aa9.02□□□□□ -0.97
SPT8YLR055C YCR022CP25620 114 aa9.01□□□□□ -0.97
SPT8YLR055C DAL80P26343 269 aa9.01□□□□□ -0.97
SPT8YLR055C GPP2P40106 250 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 157.1 ms