RNA–Protein interactions for RNA: YKL210W

UBA1, Transcript of Ubiquitin activating enzyme (E1), yeast

Gene UBA1, Length 3,075 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA1	YKL210W	COF1	Q03048	143 aa	Known RBP	4.57	□□□□□ -1.68
UBA1	YKL210W	ECM12	O13529	151 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	CRH1	P53301	507 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	YNR064C	P53750	290 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	SNP1	Q00916	300 aa	Predicted RBP	4.56	□□□□□ -1.68
UBA1	YKL210W	FIT3	Q08907	204 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	YOR029W	Q12243	111 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	AHT1	P29589	182 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	FRM2	P37261	193 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	SFT2	P38166	215 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	VHS2	P40463	436 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	DFG10	P40526	253 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	MIC27	P50945	234 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	SCW4	P53334	386 aa	Known RBP	4.56	□□□□□ -1.68
UBA1	YKL210W	HSK3	P69852	69 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	MSA1	Q08471	629 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	GEP3	Q08622	556 aa		4.56	□□□□□ -1.68
UBA1	YKL210W	DFM1	Q12743	341 aa	Known RBP	4.56	□□□□□ -1.68
UBA1	YKL210W	UBC5	P15732	148 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	MDH2	P22133	377 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	PRS4	P38063	326 aa	Predicted RBP	4.55	□□□□□ -1.68
UBA1	YKL210W	ANS1	P38832	159 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	RPS26A	P39938	119 aa	Known RBP	4.55	□□□□□ -1.68
UBA1	YKL210W	RPS26B	P39939	119 aa	Known RBP	4.55	□□□□□ -1.68
UBA1	YKL210W	YFR045W	P43617	309 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	AQR1	P53943	586 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	YRA1	Q12159	226 aa	Known RBP	4.55	□□□□□ -1.68
UBA1	YKL210W	ENV10	Q99382	181 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	YBL059W	P34224	193 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	ATG21	Q02887	496 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	YTH1	Q06102	208 aa	Predicted RBP	4.55	□□□□□ -1.68
UBA1	YKL210W	YPS3	Q12303	508 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	YAL063C-A	Q3E791	96 aa		4.55	□□□□□ -1.68
UBA1	YKL210W	RPS2	P25443	254 aa	Known RBP	4.54	□□□□□ -1.68
UBA1	YKL210W	LCB3	P47013	409 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	GEP7	P53171	287 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	YPR064W	Q12492	139 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	YCR085W	P25650	117 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	YPS1	P32329	569 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	DSK2	P48510	373 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	YLR152C	P54072	576 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	RPL23A	P0CX41	137 aa	Known RBP	4.54	□□□□□ -1.68
UBA1	YKL210W	RPL23B	P0CX42	137 aa	Known RBP	4.54	□□□□□ -1.68
UBA1	YKL210W	YNL194C	P40169	301 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	PRY3	P47033	881 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	VPS55	P47111	140 aa		4.54	□□□□□ -1.68
UBA1	YKL210W	PRP46	Q12417	451 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA1	YKL210W	RPS21B	Q3E754	87 aa	Known RBP	4.54	□□□□□ -1.68
UBA1	YKL210W	MSB2	P32334	1306 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	HEM4	P06174	275 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	RPS28B	P0C0X0	67 aa	Known RBP	4.53	□□□□□ -1.68
UBA1	YKL210W	MST28	P39552	234 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	APQ12	P40532	138 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	MST27	P53176	234 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	CAX4	P53223	239 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA1	YKL210W	SEC16	P48415	2195 aa	Known RBP	4.53	□□□□□ -1.68
UBA1	YKL210W	MDM10	P18409	493 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	MLF3	P32047	452 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UBA1	YKL210W	YPT10	P38146	199 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	YAR068W	P39564	161 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	HNT3	Q08702	217 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	YDR119W-A	Q2V2P9	66 aa		4.53	□□□□□ -1.68
UBA1	YKL210W	FAS1	P07149	2051 aa	Known RBP	4.53	□□□□□ -1.68
UBA1	YKL210W	CHO1	P08456	276 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	TIF34	P40217	347 aa	Known RBP	4.52	□□□□□ -1.69
UBA1	YKL210W	LST8	P41318	303 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	CUP9	P41817	306 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	YMR317W	Q04893	1140 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	ERG2	P32352	222 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	MID2	P36027	376 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	JJJ3	P47138	172 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	MOT3	P54785	490 aa	Known RBP	4.52	□□□□□ -1.69
UBA1	YKL210W	YMR103C	Q04436	120 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	YPR096C	O13587	100 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	COX9	P07255	59 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	TOM40	P23644	387 aa	Known RBP	4.52	□□□□□ -1.69
UBA1	YKL210W	YCR050C	P25630	102 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	FUB1	P25659	250 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	YAR029W	P39549	74 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	BUD8	P41698	603 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	SBH1	P52870	82 aa		4.52	□□□□□ -1.69
UBA1	YKL210W	ACC1	Q00955	2233 aa	Known RBP	4.51	□□□□□ -1.69
UBA1	YKL210W	REC114	P32841	428 aa		4.51	□□□□□ -1.69
UBA1	YKL210W	PCL5	P38794	229 aa		4.51	□□□□□ -1.69
UBA1	YKL210W	OGG1	P53397	376 aa	Predicted RBP	4.51	□□□□□ -1.69
UBA1	YKL210W	YDR209C	Q03480	137 aa		4.51	□□□□□ -1.69
UBA1	YKL210W	API2	Q04413	109 aa		4.51	□□□□□ -1.69
UBA1	YKL210W	YCL021W-A	Q96VH3	125 aa		4.51	□□□□□ -1.69
UBA1	YKL210W	TIM17	P39515	158 aa		4.5	□□□□□ -1.69
UBA1	YKL210W	GLE2	P40066	365 aa		4.5	□□□□□ -1.69
UBA1	YKL210W	GZF3	P42944	551 aa	Known RBP	4.5	□□□□□ -1.69
UBA1	YKL210W	YDL186W	P48568	277 aa		4.5	□□□□□ -1.69
UBA1	YKL210W	YGL118C	P53132	145 aa		4.5	□□□□□ -1.69
UBA1	YKL210W	RXT3	Q07458	294 aa		4.5	□□□□□ -1.69
UBA1	YKL210W	RPS14A	P06367	137 aa	Known RBP	4.5	□□□□□ -1.69
UBA1	YKL210W	YBL081W	P38180	368 aa	Known RBP	4.5	□□□□□ -1.69
UBA1	YKL210W	RAD6	P06104	172 aa		4.49	□□□□□ -1.69
UBA1	YKL210W	RPL2A	P0CX45	254 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms