RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	MOT3	P54785	490 aa	Known RBP	3	□□□□□ -1.93
LOS1	YKL205W	MGR2	Q02889	113 aa		3	□□□□□ -1.93
LOS1	YKL205W	YMR007W	Q03675	126 aa		3	□□□□□ -1.93
LOS1	YKL205W	SNU23	Q12368	194 aa	Predicted RBP	3	□□□□□ -1.93
LOS1	YKL205W	YER190C-B	P0CX94	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YEL077W-A	P0CX95	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YGR296C-B	P0CX96	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YPL283W-B	P0CX97	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YPR204C-A	P0CX98	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YFL068W	P0CX99	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YLL066W-A	P0CY00	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YLL067W-A	P0CY01	160 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	MRP49	P32388	137 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	MIX23	P38162	196 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	FYV6	P53913	173 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	SRL1	Q08673	210 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	PAA1	Q12447	191 aa	Known RBP	2.99	□□□□□ -1.93
LOS1	YKL205W	RPB3	P16370	318 aa	Known RBP	2.99	□□□□□ -1.93
LOS1	YKL205W	HSP12	P22943	109 aa	Known RBP	2.99	□□□□□ -1.93
LOS1	YKL205W	CDC50	P25656	391 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	JAC1	P53193	184 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	LOA1	Q06508	300 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	FCF2	Q12035	217 aa	Predicted RBP	2.99	□□□□□ -1.93
LOS1	YKL205W	SEC16	P48415	2195 aa	Known RBP	2.99	□□□□□ -1.93
LOS1	YKL205W	ADD37	Q03233	198 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YPR013C	Q12145	317 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	YOS1	Q3E834	85 aa		2.99	□□□□□ -1.93
LOS1	YKL205W	MED7	Q08278	222 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	YPS1	P32329	569 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	DER1	P38307	211 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	FYV4	P38783	130 aa	Predicted RBP	2.98	□□□□□ -1.93
LOS1	YKL205W	YDR274C	P87283	123 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	MRPS8	Q03799	155 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	GIM5	Q04493	163 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	TY1A-DR3	Q12441	440 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
LOS1	YKL205W	SIT1	P39980	628 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	AGE2	P40529	298 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	WWM1	P43582	211 aa	Known RBP	2.98	□□□□□ -1.93
LOS1	YKL205W	IZH1	Q03419	316 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	YFH1	Q07540	174 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	YGR035W-A	Q45U48	73 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	YBR126W-A	Q8TGU7	68 aa		2.98	□□□□□ -1.93
LOS1	YKL205W	YCL042W	P25572	119 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	NTF2	P33331	125 aa	Known RBP	2.97	□□□□□ -1.93
LOS1	YKL205W	YHR022C	P38763	256 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	DSK2	P48510	373 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	CGR1	P53188	120 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	YDR366C	P87287	132 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	TRI1	Q05024	226 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	RPS11A	P0CX47	156 aa	Known RBP	2.97	□□□□□ -1.93
LOS1	YKL205W	RPS11B	P0CX48	156 aa	Known RBP	2.97	□□□□□ -1.93
LOS1	YKL205W	MLF3	P32047	452 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	ATG8	P38182	117 aa	RIP-Chip data	2.97	□□□□□ -1.93	not detected
LOS1	YKL205W	YDL183C	P48569	320 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	APS2	Q00381	147 aa		2.97	□□□□□ -1.93
LOS1	YKL205W	COQ3	P27680	312 aa		2.96	□□□□□ -1.93
LOS1	YKL205W	YGR026W	P53217	278 aa		2.96	□□□□□ -1.93
LOS1	YKL205W	YGR151C	P53287	111 aa		2.96	□□□□□ -1.93
LOS1	YKL205W	CWC25	P53854	179 aa	Known RBP	2.96	□□□□□ -1.93
LOS1	YKL205W	MSA1	Q08471	629 aa		2.96	□□□□□ -1.93
LOS1	YKL205W	MRPL31	P14063	131 aa	Predicted RBP	2.96	□□□□□ -1.94
LOS1	YKL205W	YMR244W	Q04018	355 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	ARR3	Q06598	404 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	GEP3	Q08622	556 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	FMP49	A0A023PZB3	126 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	CMC1	P36064	111 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	MRPL49	P40858	161 aa	Predicted RBP	2.96	□□□□□ -1.94
LOS1	YKL205W	ZEO1	Q08245	113 aa		2.96	□□□□□ -1.94
LOS1	YKL205W	YIP3	P53633	176 aa		2.95	□□□□□ -1.94
LOS1	YKL205W	COA6	Q3E846	104 aa		2.95	□□□□□ -1.94
LOS1	YKL205W	URA5	P13298	226 aa	Known RBP	2.95	□□□□□ -1.94
LOS1	YKL205W	YOL160W	Q08321	113 aa		2.95	□□□□□ -1.94
LOS1	YKL205W	YOR015W	Q12169	119 aa		2.95	□□□□□ -1.94
LOS1	YKL205W	YGR240C-A	Q3E786	66 aa		2.95	□□□□□ -1.94
LOS1	YKL205W	LSM2	P38203	95 aa	Known RBP	2.94	□□□□□ -1.94
LOS1	YKL205W	VHS2	P40463	436 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	TOS6	P48560	102 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	GPI19	Q04082	140 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	FCF1	Q05498	189 aa	Predicted RBP	2.94	□□□□□ -1.94
LOS1	YKL205W	VAM10	Q08474	114 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	TAR1	Q8TGM6	124 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	TY1A-H	P0C2I4	478 aa	Known RBP	2.94	□□□□□ -1.94
LOS1	YKL205W	MDM10	P18409	493 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	VMA21	P41806	77 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	MCM22	P47167	239 aa		2.94	□□□□□ -1.94
LOS1	YKL205W	PFY1	P07274	126 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	MBB1	P39534	108 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	VPS71	Q03433	280 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	YHR212W-A	P0CX91	67 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	YBR013C	P38215	129 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	PAU7	P39545	55 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	YFR035C	P43608	114 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	YOR105W	Q08504	108 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	FCY1	Q12178	158 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	RPL27A	P0C2H6	136 aa	Known RBP	2.93	□□□□□ -1.94
LOS1	YKL205W	RPL2A	P0CX45	254 aa	Known RBP	2.93	□□□□□ -1.94
LOS1	YKL205W	RPL2B	P0CX46	254 aa	Known RBP	2.93	□□□□□ -1.94
LOS1	YKL205W	ELO2	P25358	347 aa		2.93	□□□□□ -1.94
LOS1	YKL205W	AUA1	P32450	94 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms