RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YBR184WP38299 523 aa4.08□□□□□ -1.76
MSH1YHR120W ATP19P81451 68 aa4.08□□□□□ -1.76
MSH1YHR120W LPP1Q04396 274 aa4.08□□□□□ -1.76
MSH1YHR120W NDE2Q07500 545 aa4.08□□□□□ -1.76
MSH1YHR120W POM34Q12445 299 aa4.08□□□□□ -1.76
MSH1YHR120W UIP3P39547 235 aa4.08□□□□□ -1.76
MSH1YHR120W YJL118WP47022 219 aa4.08□□□□□ -1.76
MSH1YHR120W YJR015WP47090 510 aa4.08□□□□□ -1.76
MSH1YHR120W YGR045CP53229 120 aa4.08□□□□□ -1.76
MSH1YHR120W SRL1Q08673 210 aa4.08□□□□□ -1.76
MSH1YHR120W RPL9AP05738 191 aaKnown RBP4.08□□□□□ -1.76
MSH1YHR120W YCR007CP25354 239 aa4.08□□□□□ -1.76
MSH1YHR120W BNA1P47096 177 aa4.08□□□□□ -1.76
MSH1YHR120W DYN2Q02647 92 aa4.08□□□□□ -1.76
MSH1YHR120W YMR166CQ03829 368 aa4.08□□□□□ -1.76
MSH1YHR120W PAU23Q07987 124 aa4.08□□□□□ -1.76
MSH1YHR120W PAU17Q12370 124 aa4.08□□□□□ -1.76
MSH1YHR120W RPA43P46669 326 aa4.07□□□□□ -1.76
MSH1YHR120W DSK2P48510 373 aa4.07□□□□□ -1.76
MSH1YHR120W TRI1Q05024 226 aa4.07□□□□□ -1.76
MSH1YHR120W YCR024C-BQ3E7Z8 88 aa4.07□□□□□ -1.76
MSH1YHR120W SOD1P00445 154 aaKnown RBP4.07□□□□□ -1.76
MSH1YHR120W YER190C-BP0CX94 160 aa4.07□□□□□ -1.76
MSH1YHR120W YEL077W-AP0CX95 160 aa4.07□□□□□ -1.76
MSH1YHR120W YGR296C-BP0CX96 160 aa4.07□□□□□ -1.76
MSH1YHR120W YPL283W-BP0CX97 160 aa4.07□□□□□ -1.76
MSH1YHR120W YPR204C-AP0CX98 160 aa4.07□□□□□ -1.76
MSH1YHR120W VMA16P23968 213 aa4.07□□□□□ -1.76
MSH1YHR120W DAD2P36162 133 aa4.07□□□□□ -1.76
MSH1YHR120W MIX23P38162 196 aa4.07□□□□□ -1.76
MSH1YHR120W YHR173CP38864 112 aa4.07□□□□□ -1.76
MSH1YHR120W SSU72P53538 206 aaPredicted RBP4.07□□□□□ -1.76
MSH1YHR120W MIX17Q03667 156 aa4.07□□□□□ -1.76
MSH1YHR120W TVP18Q04767 167 aa4.07□□□□□ -1.76
MSH1YHR120W CNL1Q06333 122 aa4.07□□□□□ -1.76
MSH1YHR120W RAD23P32628 398 aaKnown RBP4.06□□□□□ -1.76
MSH1YHR120W GLC8P41818 229 aa4.06□□□□□ -1.76
MSH1YHR120W STD1Q02794 444 aa4.06□□□□□ -1.76
MSH1YHR120W DOG1P38774 246 aa4.06□□□□□ -1.76
MSH1YHR120W FYV4P38783 130 aaPredicted RBP4.06□□□□□ -1.76
MSH1YHR120W RPL9BP51401 191 aaKnown RBP4.06□□□□□ -1.76
MSH1YHR120W ATG33Q06485 197 aa4.06□□□□□ -1.76
MSH1YHR120W ATO3Q12359 275 aa4.06□□□□□ -1.76
MSH1YHR120W YIL163CP40448 117 aa4.05□□□□□ -1.76
MSH1YHR120W YNL234WP53857 426 aa4.05□□□□□ -1.76
MSH1YHR120W TPT1Q12272 230 aaKnown RBP4.05□□□□□ -1.76
MSH1YHR120W CYC3P06182 269 aa4.05□□□□□ -1.76
MSH1YHR120W PIS1P06197 220 aaKnown RBP4.05□□□□□ -1.76
MSH1YHR120W MRS3P10566 314 aa4.05□□□□□ -1.76
MSH1YHR120W NNK1P36003 928 aa4.05□□□□□ -1.76
MSH1YHR120W AME1P38313 324 aa4.05□□□□□ -1.76
MSH1YHR120W TEM1P38987 245 aa4.05□□□□□ -1.76
MSH1YHR120W YER134CP40081 178 aa4.05□□□□□ -1.76
MSH1YHR120W FCY1Q12178 158 aa4.05□□□□□ -1.76
MSH1YHR120W YPR014CQ6B0W2 109 aa4.05□□□□□ -1.76
MSH1YHR120W YCL001W-BQ96VH2 84 aa4.05□□□□□ -1.76
MSH1YHR120W ADE8P04161 214 aa4.04□□□□□ -1.76
MSH1YHR120W HSP12P22943 109 aaKnown RBP4.04□□□□□ -1.76
MSH1YHR120W YJL028WP47062 111 aa4.04□□□□□ -1.76
MSH1YHR120W MRX11Q03079 207 aa4.04□□□□□ -1.76
MSH1YHR120W FIT2Q08906 153 aa4.04□□□□□ -1.76
MSH1YHR120W YDL157CQ12082 118 aa4.04□□□□□ -1.76
MSH1YHR120W HAP3P13434 144 aa4.04□□□□□ -1.76
MSH1YHR120W YCR041WP37265 110 aa4.04□□□□□ -1.76
MSH1YHR120W CSH1P38287 376 aa4.04□□□□□ -1.76
MSH1YHR120W BDH1P39714 382 aa4.04□□□□□ -1.76
MSH1YHR120W PRE5P40302 234 aaKnown RBP4.04□□□□□ -1.76
MSH1YHR120W GIM5Q04493 163 aa4.04□□□□□ -1.76
MSH1YHR120W PHO85P17157 305 aa4.04□□□□□ -1.76
MSH1YHR120W UTR5P32630 166 aa4.04□□□□□ -1.76
MSH1YHR120W YGL118CP53132 145 aa4.04□□□□□ -1.76
MSH1YHR120W COX18P53239 316 aa4.04□□□□□ -1.76
MSH1YHR120W YGR151CP53287 111 aa4.04□□□□□ -1.76
MSH1YHR120W YNR071CP53757 342 aa4.04□□□□□ -1.76
MSH1YHR120W NAT5Q08689 176 aa4.04□□□□□ -1.76
MSH1YHR120W HEM13P11353 328 aaKnown RBP4.03□□□□□ -1.76
MSH1YHR120W RPS2P25443 254 aaKnown RBP4.03□□□□□ -1.76
MSH1YHR120W GSP1P32835 219 aaKnown RBP4.03□□□□□ -1.76
MSH1YHR120W GSP2P32836 220 aaKnown RBP4.03□□□□□ -1.76
MSH1YHR120W YDL183CP48569 320 aa4.03□□□□□ -1.76
MSH1YHR120W BRP1P53194 125 aa4.03□□□□□ -1.76
MSH1YHR120W YGR018CP53211 109 aa4.03□□□□□ -1.76
MSH1YHR120W YHP1Q04116 353 aa4.03□□□□□ -1.76
MSH1YHR120W YOS1Q3E834 85 aa4.03□□□□□ -1.76
MSH1YHR120W YMR316C-AI2HB70 103 aa4.03□□□□□ -1.76
MSH1YHR120W MRS1P07266 363 aa4.03□□□□□ -1.76
MSH1YHR120W PAM17P36147 197 aa4.03□□□□□ -1.76
MSH1YHR120W POS5Q06892 414 aa4.03□□□□□ -1.76
MSH1YHR120W YPL162CQ12042 273 aa4.03□□□□□ -1.76
MSH1YHR120W PHD1P36093 366 aa4.02□□□□□ -1.77
MSH1YHR120W PRY2P36110 329 aa4.02□□□□□ -1.77
MSH1YHR120W PRS4P38063 326 aaPredicted RBP4.02□□□□□ -1.77
MSH1YHR120W YDL186WP48568 277 aa4.02□□□□□ -1.77
MSH1YHR120W YGL230CP53074 147 aa4.02□□□□□ -1.77
MSH1YHR120W COX2P00410 251 aa4.02□□□□□ -1.77
MSH1YHR120W NOP1P15646 327 aaKnown RBP4.02□□□□□ -1.77
MSH1YHR120W YCR022CP25620 114 aa4.02□□□□□ -1.77
MSH1YHR120W YBR090CP38253 122 aa4.02□□□□□ -1.77
MSH1YHR120W YIP1P53039 248 aa4.02□□□□□ -1.77
MSH1YHR120W SEC4P07560 215 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms