RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE1	YGL248W	RPL9A	P05738	191 aa	Known RBP	4.14	□□□□□ -1.75
PDE1	YGL248W	MDH2	P22133	377 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	ASP1	P38986	381 aa	Predicted RBP	4.14	□□□□□ -1.75
PDE1	YGL248W	RPR2	P40571	144 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	RPL9B	P51401	191 aa	Known RBP	4.14	□□□□□ -1.75
PDE1	YGL248W	YNR064C	P53750	290 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	YPL067C	Q02754	198 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	YMR244W	Q04018	355 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	NDD1	Q08887	554 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	DNA2	P38859	1522 aa		4.14	□□□□□ -1.75
PDE1	YGL248W	HMRA1	P0CY11	126 aa		4.13	□□□□□ -1.75
PDE1	YGL248W	HAL1	Q01766	294 aa		4.13	□□□□□ -1.75
PDE1	YGL248W	SHH3	Q04487	196 aa		4.13	□□□□□ -1.75
PDE1	YGL248W	CRC1	Q12289	327 aa		4.13	□□□□□ -1.75
PDE1	YGL248W	FLX1	P40464	311 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	YDR274C	P87283	123 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	RSM10	Q03201	203 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	API2	Q04413	109 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	GPI11	Q06636	219 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	YDR029W	Q12111	104 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	ATP20	Q12233	115 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	KSH1	Q8TGJ3	72 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	TY1B-PR2	P0C2J0	1756 aa		4.12	□□□□□ -1.75
PDE1	YGL248W	ESC1	Q03661	1658 aa	Known RBP	4.11	□□□□□ -1.75
PDE1	YGL248W	UBC4	P15731	148 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	MRPL11	P36521	249 aa	Predicted RBP	4.11	□□□□□ -1.75
PDE1	YGL248W	GPI18	P38211	433 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	YAL064W	P39711	94 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	GRX5	Q02784	150 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	LIP1	Q03579	150 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	RAF1	Q06891	181 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	FEX1	Q08913	375 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	COA6	Q3E846	104 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	SCC2	Q04002	1493 aa		4.11	□□□□□ -1.75
PDE1	YGL248W	BPT1	P14772	1559 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	ECM12	O13529	151 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	POR1	P04840	283 aa	Known RBP	4.1	□□□□□ -1.75
PDE1	YGL248W	YEL073C	P39974	107 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	HPA3	P39979	161 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YFR035C	P43608	114 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YGR026W	P53217	278 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	ATP19	P81451	68 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YMR295C	Q03559	197 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YMR082C	Q04276	118 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YOR376W-A	Q3E805	51 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YHR213W-A	Q8TGT4	77 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	RKR1	Q04781	1562 aa		4.1	□□□□□ -1.75
PDE1	YGL248W	YRF1-3	P0CX14	1859 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	YRF1-7	P0CX15	1859 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	YRF1-6	P53819	1859 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	YET1	P35723	206 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	SCW4	P53334	386 aa	Known RBP	4.09	□□□□□ -1.75
PDE1	YGL248W	IRC25	Q07951	179 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	DFM1	Q12743	341 aa	Known RBP	4.09	□□□□□ -1.75
PDE1	YGL248W	SCS22	Q6Q595	175 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	YSP2	Q06681	1438 aa		4.09	□□□□□ -1.75
PDE1	YGL248W	RRT1	P38192	103 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	YHR125W	P38831	101 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	CTR2	P38865	189 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	ERG25	P53045	309 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	ATG2	P53855	1592 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	YLR281C	Q05863	155 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	FEX2	Q08991	375 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	YOS1	Q3E834	85 aa		4.08	□□□□□ -1.76
PDE1	YGL248W	SNQ2	P32568	1501 aa	Known RBP	4.07	□□□□□ -1.76
PDE1	YGL248W	YHL042W	P38729	150 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	TDA2	P40045	126 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	MSL1	P40567	111 aa	Predicted RBP	4.07	□□□□□ -1.76
PDE1	YGL248W	DAN1	P47178	298 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	THG1	P53215	237 aa	Known RBP	4.07	□□□□□ -1.76
PDE1	YGL248W	CAX4	P53223	239 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	CSI2	Q08054	341 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	YOL029C	Q08187	201 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	YLR365W	Q7LIF2	110 aa		4.07	□□□□□ -1.76
PDE1	YGL248W	PAN1	P32521	1480 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	STF2	P16965	84 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	PTH1	P38876	190 aa	Known RBP	4.06	□□□□□ -1.76
PDE1	YGL248W	SNF11	P38956	169 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	SPO73	P40031	143 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	IGD1	P43598	195 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	RIM9	Q04734	239 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	ECM19	Q06011	112 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	MIC10	Q96VH5	97 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	PDR10	P51533	1564 aa		4.06	□□□□□ -1.76
PDE1	YGL248W	LSM2	P38203	95 aa	Known RBP	4.05	□□□□□ -1.76
PDE1	YGL248W	PHO88	P38264	188 aa	Predicted RBP	4.05	□□□□□ -1.76
PDE1	YGL248W	EMC5	P40540	141 aa		4.05	□□□□□ -1.76
PDE1	YGL248W	PIR5	P46999	287 aa		4.05	□□□□□ -1.76
PDE1	YGL248W	BNI1	P41832	1953 aa		4.05	□□□□□ -1.76
PDE1	YGL248W	INO4	P13902	151 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	YKL044W	P36092	106 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	SWD3	P38123	315 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	TVP23	P38962	199 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	YNL217W	P40152	326 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	KNH1	P50112	268 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	YOR385W	Q08909	290 aa		4.04	□□□□□ -1.76
PDE1	YGL248W	MAK31	P23059	88 aa		4.03	□□□□□ -1.76
PDE1	YGL248W	QCR10	P37299	77 aa		4.03	□□□□□ -1.76
PDE1	YGL248W	CYB5	P40312	120 aa		4.03	□□□□□ -1.76
PDE1	YGL248W	GPI19	Q04082	140 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms