RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W MGT1P26188 188 aa0.37□□□□□ -2.35
YCK3YER123W IDH1P28834 360 aaKnown RBP RIP-Chip data0.37□□□□□ -2.35not detected
YCK3YER123W OCH1P31755 480 aa0.37□□□□□ -2.35
YCK3YER123W SHE2P36068 246 aaKnown RBP RIP-Chip data0.37□□□□□ -2.35not detected
YCK3YER123W YER076CP40049 302 aa0.37□□□□□ -2.35
YCK3YER123W YER085CP40058 173 aa0.37□□□□□ -2.35
YCK3YER123W YNL194CP40169 301 aa0.37□□□□□ -2.35
YCK3YER123W KNH1P50112 268 aa0.37□□□□□ -2.35
YCK3YER123W ARO8P53090 500 aaKnown RBP0.37□□□□□ -2.35
YCK3YER123W YDC1Q02896 317 aa0.37□□□□□ -2.35
YCK3YER123W YDR391CQ04170 232 aa0.37□□□□□ -2.35
YCK3YER123W YLR307C-AQ3E825 87 aa0.37□□□□□ -2.35
YCK3YER123W YER188C-AP0C0V2 99 aa0.36□□□□□ -2.35
YCK3YER123W YDR034C-AP0C289 58 aa0.36□□□□□ -2.35
YCK3YER123W STE18P18852 110 aa0.36□□□□□ -2.35
YCK3YER123W SPS18P32572 300 aa0.36□□□□□ -2.35
YCK3YER123W SRY1P36007 326 aa0.36□□□□□ -2.35
YCK3YER123W ERG28P40030 148 aa0.36□□□□□ -2.35
YCK3YER123W YJL218WP40892 196 aaKnown RBP0.36□□□□□ -2.35
YCK3YER123W YRB1P41920 201 aaKnown RBP0.36□□□□□ -2.35
YCK3YER123W IRC18P47056 224 aa0.36□□□□□ -2.35
YCK3YER123W RPL37BP51402 88 aaKnown RBP0.36□□□□□ -2.35
YCK3YER123W POP3P53833 195 aaPredicted RBP0.36□□□□□ -2.35
YCK3YER123W SGF11Q03067 99 aa0.36□□□□□ -2.35
YCK3YER123W YDR278CQ05612 105 aa0.36□□□□□ -2.35
YCK3YER123W YOL160WQ08321 113 aa0.36□□□□□ -2.35
YCK3YER123W ARG80P07249 177 aa0.36□□□□□ -2.35
YCK3YER123W SEC11P15367 167 aa0.36□□□□□ -2.35
YCK3YER123W CBF1P17106 351 aa0.36□□□□□ -2.35
YCK3YER123W HYM1P32464 399 aa0.36□□□□□ -2.35
YCK3YER123W YER034WP40022 185 aaKnown RBP0.36□□□□□ -2.35
YCK3YER123W PDR17P53844 350 aa0.36□□□□□ -2.35
YCK3YER123W YNL140CP53910 189 aa0.36□□□□□ -2.35
YCK3YER123W LCL1Q02786 101 aa0.36□□□□□ -2.35
YCK3YER123W MET31Q03081 177 aa0.36□□□□□ -2.35
YCK3YER123W UPS1Q05776 175 aa0.36□□□□□ -2.35
YCK3YER123W YOR343CQ12484 108 aa0.36□□□□□ -2.35
YCK3YER123W YFR032C-BQ8TGU2 87 aa0.36□□□□□ -2.35
YCK3YER123W YDR157WA0A023PZE8 133 aa0.35□□□□□ -2.35
YCK3YER123W RPB3P16370 318 aaKnown RBP0.35□□□□□ -2.35
YCK3YER123W MER1P16523 270 aa0.35□□□□□ -2.35
YCK3YER123W MAG1P22134 296 aaKnown RBP0.35□□□□□ -2.35
YCK3YER123W HSP30P25619 332 aa0.35□□□□□ -2.35
YCK3YER123W YCR090CP25654 182 aaKnown RBP0.35□□□□□ -2.35
YCK3YER123W UTP30P36144 274 aaKnown RBP0.35□□□□□ -2.35
YCK3YER123W ECM31P38122 312 aa0.35□□□□□ -2.35
YCK3YER123W RTC3P38804 111 aaPredicted RBP0.35□□□□□ -2.35
YCK3YER123W YEL067CP39978 195 aa0.35□□□□□ -2.35
YCK3YER123W YPL073CP40323 161 aa0.35□□□□□ -2.35
YCK3YER123W HUA1P40325 198 aa0.35□□□□□ -2.35
YCK3YER123W AIM25P47140 327 aa0.35□□□□□ -2.35
YCK3YER123W CWC27Q02770 301 aa0.35□□□□□ -2.35
YCK3YER123W YMR295CQ03559 197 aa0.35□□□□□ -2.35
YCK3YER123W BNA7Q04066 261 aa0.35□□□□□ -2.35
YCK3YER123W HNT1Q04344 158 aaKnown RBP0.35□□□□□ -2.35
YCK3YER123W GGA1Q06336 557 aa0.35□□□□□ -2.35
YCK3YER123W YKL183C-AQ3E765 70 aa0.35□□□□□ -2.35
YCK3YER123W YCL012CQ8J0M4 134 aa0.35□□□□□ -2.35
YCK3YER123W MSS2P40990 351 aa0.34□□□□□ -2.36
YCK3YER123W FMP32P43557 207 aa0.34□□□□□ -2.36
YCK3YER123W LSM7P53905 115 aaKnown RBP0.34□□□□□ -2.36
YCK3YER123W RUD3Q12234 484 aaKnown RBP0.34□□□□□ -2.36
YCK3YER123W COX5BP00425 151 aa0.33□□□□□ -2.36
YCK3YER123W HTB1P02293 131 aaKnown RBP0.33□□□□□ -2.36
YCK3YER123W HTB2P02294 131 aa0.33□□□□□ -2.36
YCK3YER123W RPL27AP0C2H6 136 aaKnown RBP0.33□□□□□ -2.36
YCK3YER123W TIR1P10863 254 aa0.33□□□□□ -2.36
YCK3YER123W SPO13P23624 291 aa0.33□□□□□ -2.36
YCK3YER123W SEC17P32602 292 aa0.33□□□□□ -2.36
YCK3YER123W YHL042WP38729 150 aa0.33□□□□□ -2.36
YCK3YER123W HYR1P40581 163 aaKnown RBP0.33□□□□□ -2.36
YCK3YER123W OTU1P43558 301 aa0.33□□□□□ -2.36
YCK3YER123W YAE1P47118 141 aaPredicted RBP0.33□□□□□ -2.36
YCK3YER123W XPT1P47165 209 aa0.33□□□□□ -2.36
YCK3YER123W CWC23P52868 283 aaPredicted RBP0.33□□□□□ -2.36
YCK3YER123W YGR050CP53231 118 aa0.33□□□□□ -2.36
YCK3YER123W COG5P53951 403 aa0.33□□□□□ -2.36
YCK3YER123W YMR226CQ05016 267 aaKnown RBP0.33□□□□□ -2.36
YCK3YER123W VAM10Q08474 114 aa0.33□□□□□ -2.36
YCK3YER123W DGA1Q08650 418 aa0.33□□□□□ -2.36
YCK3YER123W GET4Q12125 312 aa0.33□□□□□ -2.36
YCK3YER123W YPR013CQ12145 317 aa0.33□□□□□ -2.36
YCK3YER123W ODC2Q99297 307 aa0.33□□□□□ -2.36
YCK3YER123W POR1P04840 283 aaKnown RBP0.32□□□□□ -2.36
YCK3YER123W RPL30P14120 105 aaKnown RBP0.32□□□□□ -2.36
YCK3YER123W YPK2P18961 677 aa0.32□□□□□ -2.36
YCK3YER123W ATP15P21306 62 aa0.32□□□□□ -2.36
YCK3YER123W PAN3P36102 679 aaPredicted RBP0.32□□□□□ -2.36
YCK3YER123W VMA22P38784 181 aa0.32□□□□□ -2.36
YCK3YER123W ARP3P47117 449 aaKnown RBP0.32□□□□□ -2.36
YCK3YER123W MGA1P53050 456 aa0.32□□□□□ -2.36
YCK3YER123W TOM7P53507 60 aa0.32□□□□□ -2.36
YCK3YER123W GRX5Q02784 150 aa0.32□□□□□ -2.36
YCK3YER123W UPS3Q04006 179 aa0.32□□□□□ -2.36
YCK3YER123W GPI17Q04080 534 aa0.32□□□□□ -2.36
YCK3YER123W SHH3Q04487 196 aa0.32□□□□□ -2.36
YCK3YER123W QCR6P00127 147 aa0.32□□□□□ -2.36
YCK3YER123W RPB4P20433 221 aaPredicted RBP0.32□□□□□ -2.36
YCK3YER123W NTG1P31378 399 aa0.32□□□□□ -2.36
YCK3YER123W SFK1P35735 353 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms