RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W CRZ1P53968 678 aa4.29□□□□□ -1.72
UBP9YER098W LPP1Q04396 274 aa4.29□□□□□ -1.72
UBP9YER098W GRH1Q04410 372 aaKnown RBP4.29□□□□□ -1.72
UBP9YER098W YOR029WQ12243 111 aa4.29□□□□□ -1.72
UBP9YER098W SMT3Q12306 101 aaKnown RBP4.29□□□□□ -1.72
UBP9YER098W MDH2P22133 377 aa4.29□□□□□ -1.72
UBP9YER098W YBR090CP38253 122 aa4.29□□□□□ -1.72
UBP9YER098W XBP1P40489 647 aa4.29□□□□□ -1.72
UBP9YER098W YIL012WP40551 113 aa4.29□□□□□ -1.72
UBP9YER098W OST1P41543 476 aaKnown RBP4.29□□□□□ -1.72
UBP9YER098W YFL065CP43539 102 aa4.29□□□□□ -1.72
UBP9YER098W PET191Q02772 108 aa4.29□□□□□ -1.72
UBP9YER098W PRM3Q08931 133 aa4.29□□□□□ -1.72
UBP9YER098W YPR203WQ08994 102 aa4.29□□□□□ -1.72
UBP9YER098W YKL071WP36086 256 aa4.28□□□□□ -1.72
UBP9YER098W YMR007WQ03675 126 aa4.28□□□□□ -1.72
UBP9YER098W YPL229WQ99395 206 aa4.28□□□□□ -1.72
UBP9YER098W SRP14P38985 146 aa4.28□□□□□ -1.72
UBP9YER098W MOB1P40484 314 aa4.28□□□□□ -1.72
UBP9YER098W YBL112CQ3E7Y4 105 aa4.28□□□□□ -1.72
UBP9YER098W ZRT1P32804 376 aa4.27□□□□□ -1.73
UBP9YER098W COX15P40086 486 aa4.27□□□□□ -1.73
UBP9YER098W DFG10P40526 253 aa4.27□□□□□ -1.73
UBP9YER098W GPI2P46961 280 aa4.27□□□□□ -1.73
UBP9YER098W TDA4P47153 279 aa4.27□□□□□ -1.73
UBP9YER098W RIM9Q04734 239 aa4.27□□□□□ -1.73
UBP9YER098W YIL102C-AQ2V2P5 75 aa4.27□□□□□ -1.73
UBP9YER098W YKR104WP0CE69 306 aa4.26□□□□□ -1.73
UBP9YER098W YOX1P34161 385 aa4.26□□□□□ -1.73
UBP9YER098W YNL208WP40159 199 aaKnown RBP4.26□□□□□ -1.73
UBP9YER098W YNL200CP40165 246 aaKnown RBP4.26□□□□□ -1.73
UBP9YER098W MCP1Q12106 302 aa4.26□□□□□ -1.73
UBP9YER098W POC4Q12245 148 aaPredicted RBP4.26□□□□□ -1.73
UBP9YER098W YLR361C-AQ3E795 98 aa4.26□□□□□ -1.73
UBP9YER098W CDC36P06100 191 aaPredicted RBP4.26□□□□□ -1.73
UBP9YER098W MRS3P10566 314 aa4.26□□□□□ -1.73
UBP9YER098W FCY2P17064 533 aa4.26□□□□□ -1.73
UBP9YER098W PCL1P24867 279 aa4.26□□□□□ -1.73
UBP9YER098W RFA3P26755 122 aaKnown RBP4.26□□□□□ -1.73
UBP9YER098W FRM2P37261 193 aa4.26□□□□□ -1.73
UBP9YER098W ATX1P38636 73 aa4.26□□□□□ -1.73
UBP9YER098W MTC6P38849 526 aa4.26□□□□□ -1.73
UBP9YER098W RPS22AP0C0W1 130 aaKnown RBP4.25□□□□□ -1.73
UBP9YER098W YGP1P38616 354 aaKnown RBP4.25□□□□□ -1.73
UBP9YER098W ARP3P47117 449 aaKnown RBP4.25□□□□□ -1.73
UBP9YER098W TPC1P53257 314 aa4.25□□□□□ -1.73
UBP9YER098W SWT21P53873 357 aaPredicted RBP4.25□□□□□ -1.73
UBP9YER098W PAM18Q07914 168 aa4.25□□□□□ -1.73
UBP9YER098W HUG1Q6Q5K6 68 aa4.25□□□□□ -1.73
UBP9YER098W RPL20AP0CX23 172 aaKnown RBP4.25□□□□□ -1.73
UBP9YER098W RPL20BP0CX24 172 aaPredicted RBP4.25□□□□□ -1.73
UBP9YER098W WSC4P38739 605 aa4.25□□□□□ -1.73
UBP9YER098W ECM14P38836 430 aa4.25□□□□□ -1.73
UBP9YER098W YGR269WP40326 108 aa4.25□□□□□ -1.73
UBP9YER098W YML079WQ03629 201 aa4.25□□□□□ -1.73
UBP9YER098W AYT1Q12226 474 aa4.25□□□□□ -1.73
UBP9YER098W RPS22BQ3E7Y3 130 aaKnown RBP4.25□□□□□ -1.73
UBP9YER098W VAR1P02381 398 aa4.24□□□□□ -1.73
UBP9YER098W YCR023CP25351 611 aa4.24□□□□□ -1.73
UBP9YER098W YBL059WP34224 193 aa4.24□□□□□ -1.73
UBP9YER098W DOG2P38773 246 aa4.24□□□□□ -1.73
UBP9YER098W COX14P39103 70 aa4.24□□□□□ -1.73
UBP9YER098W SEC72P39742 193 aaKnown RBP4.24□□□□□ -1.73
UBP9YER098W OST2P46964 130 aa4.24□□□□□ -1.73
UBP9YER098W SDS23P53172 527 aa4.24□□□□□ -1.73
UBP9YER098W POP3P53833 195 aaPredicted RBP4.24□□□□□ -1.73
UBP9YER098W VPS71Q03433 280 aa4.24□□□□□ -1.73
UBP9YER098W GTO3Q04806 366 aa4.24□□□□□ -1.73
UBP9YER098W QCR9P22289 66 aa4.24□□□□□ -1.73
UBP9YER098W AGA1P32323 725 aa4.24□□□□□ -1.73
UBP9YER098W PRS4P38063 326 aaPredicted RBP4.24□□□□□ -1.73
UBP9YER098W FYV4P38783 130 aaPredicted RBP4.24□□□□□ -1.73
UBP9YER098W TVP23P38962 199 aa4.24□□□□□ -1.73
UBP9YER098W CUP9P41817 306 aa4.24□□□□□ -1.73
UBP9YER098W CPD1P53314 239 aa4.24□□□□□ -1.73
UBP9YER098W YPL264CQ08980 353 aa4.24□□□□□ -1.73
UBP9YER098W YDR157WA0A023PZE8 133 aa4.23□□□□□ -1.73
UBP9YER098W MRS1P07266 363 aa4.23□□□□□ -1.73
UBP9YER098W DER1P38307 211 aa4.23□□□□□ -1.73
UBP9YER098W YER121WP40076 114 aa4.23□□□□□ -1.73
UBP9YER098W RPR2P40571 144 aa4.23□□□□□ -1.73
UBP9YER098W WWM1P43582 211 aaKnown RBP4.23□□□□□ -1.73
UBP9YER098W LCB3P47013 409 aa4.23□□□□□ -1.73
UBP9YER098W YGL118CP53132 145 aa4.23□□□□□ -1.73
UBP9YER098W YLR460CP54007 376 aa4.23□□□□□ -1.73
UBP9YER098W DPP1Q05521 289 aa4.23□□□□□ -1.73
UBP9YER098W YIR021W-AQ3E739 70 aa4.23□□□□□ -1.73
UBP9YER098W ATG40Q99325 256 aa4.23□□□□□ -1.73
UBP9YER098W HUA1P40325 198 aa4.23□□□□□ -1.73
UBP9YER098W YPR098CQ06089 161 aa4.23□□□□□ -1.73
UBP9YER098W TAD3Q9URQ3 322 aa4.23□□□□□ -1.73
UBP9YER098W TOM1Q03280 3268 aa4.22□□□□□ -1.73
UBP9YER098W YOR062CP36025 268 aa4.22□□□□□ -1.73
UBP9YER098W SNF11P38956 169 aa4.22□□□□□ -1.73
UBP9YER098W YAR068WP39564 161 aa4.22□□□□□ -1.73
UBP9YER098W DSK2P48510 373 aa4.22□□□□□ -1.73
UBP9YER098W MIC27P50945 234 aa4.22□□□□□ -1.73
UBP9YER098W SUR7P54003 302 aa4.22□□□□□ -1.73
UBP9YER098W BEM2P39960 2167 aaKnown RBP4.22□□□□□ -1.73
UBP9YER098W MSI1P13712 422 aa4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms