RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene CDC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC34	YDR054C	SRP14	P38985	146 aa		4.91	□□□□□ -1.62
CDC34	YDR054C	LSM4	P40070	187 aa	Known RBP	4.91	□□□□□ -1.62
CDC34	YDR054C	NSA2	P40078	261 aa	Known RBP	4.91	□□□□□ -1.62
CDC34	YDR054C	YJL213W	P40896	331 aa		4.91	□□□□□ -1.62
CDC34	YDR054C	YMR181C	Q03231	154 aa		4.91	□□□□□ -1.62
CDC34	YDR054C	MCH1	Q07376	486 aa		4.91	□□□□□ -1.62
CDC34	YDR054C	JID1	Q12350	301 aa		4.91	□□□□□ -1.62
CDC34	YDR054C	SOD1	P00445	154 aa	Known RBP	4.9	□□□□□ -1.63
CDC34	YDR054C	BGL2	P15703	313 aa	Known RBP	4.9	□□□□□ -1.63
CDC34	YDR054C	RPL16A	P26784	199 aa	Known RBP	4.9	□□□□□ -1.63
CDC34	YDR054C	INO2	P26798	304 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	SRB6	P32570	121 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	AME1	P38313	324 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	COX14	P39103	70 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	LST8	P41318	303 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	YIP3	P53633	176 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	YMR317W	Q04893	1140 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	YPS3	Q12303	508 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	YCR024C-B	Q3E7Z8	88 aa		4.9	□□□□□ -1.63
CDC34	YDR054C	LDS1	P31379	325 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	POP7	P38291	140 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	YBR292C	P38357	123 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	SPC25	P40014	221 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	YJR015W	P47090	510 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	TMA23	Q03525	211 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	YMR007W	Q03675	126 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	YMR166C	Q03829	368 aa		4.89	□□□□□ -1.63
CDC34	YDR054C	YLR179C	Q06252	201 aa	Known RBP	4.89	□□□□□ -1.63
CDC34	YDR054C	YMR316C-A	I2HB70	103 aa		4.88	□□□□□ -1.63
CDC34	YDR054C	PIS1	P06197	220 aa	Known RBP	4.88	□□□□□ -1.63
CDC34	YDR054C	YBL059W	P34224	193 aa		4.88	□□□□□ -1.63
CDC34	YDR054C	RPL14A	P36105	138 aa	Known RBP	4.88	□□□□□ -1.63
CDC34	YDR054C	RIB5	P38145	238 aa		4.88	□□□□□ -1.63
CDC34	YDR054C	SHG1	P38337	142 aa		4.88	□□□□□ -1.63
CDC34	YDR054C	YPT31	P38555	223 aa	Known RBP	4.88	□□□□□ -1.63
CDC34	YDR054C	RPL14B	P38754	138 aa	Known RBP	4.88	□□□□□ -1.63
CDC34	YDR054C	AVO2	Q04749	426 aa		4.88	□□□□□ -1.63
CDC34	YDR054C	QCR9	P22289	66 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	CNB1	P25296	175 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	YCL042W	P25572	119 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	KTI12	P34253	313 aa	Known RBP	4.87	□□□□□ -1.63
CDC34	YDR054C	AVT5	P38176	459 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	YIL024C	P40543	189 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	YFR057W	P43625	151 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	SNO1	Q03144	224 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	PCC1	Q3E833	88 aa		4.87	□□□□□ -1.63
CDC34	YDR054C	AGA1	P32323	725 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	SHB17	P36136	271 aa	Known RBP	4.86	□□□□□ -1.63
CDC34	YDR054C	DER1	P38307	211 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	ALG13	P53178	202 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	BOR1	P53838	576 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	SHH3	Q04487	196 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	YMR253C	Q04835	414 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	DPP1	Q05521	289 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	IRC23	Q08416	157 aa		4.86	□□□□□ -1.63
CDC34	YDR054C	SAL1	D6W196	494 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	TOM40	P23644	387 aa	Known RBP	4.85	□□□□□ -1.63
CDC34	YDR054C	YAR068W	P39564	161 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	MIC27	P50945	234 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	YPS5	P53057	165 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	YGR018C	P53211	109 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	PAU4	P53427	120 aa		4.85	□□□□□ -1.63
CDC34	YDR054C	PHO85	P17157	305 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	YCR022C	P25620	114 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	RPB9	P27999	122 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	NTF2	P33331	125 aa	Known RBP	4.84	□□□□□ -1.63
CDC34	YDR054C	MRPL38	P35996	138 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC34	YDR054C	YBL071C	P38185	102 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	BDH1	P39714	382 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	SMD3	P43321	101 aa	Known RBP	4.84	□□□□□ -1.63
CDC34	YDR054C	DSK2	P48510	373 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	MMS2	P53152	137 aa		4.84	□□□□□ -1.63
CDC34	YDR054C	PAU1	P0CE88	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU14	P0CE89	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU6	P0CE90	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU18	P0CE91	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU8	P0CE92	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU11	P0CE93	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	RPL23A	P0CX41	137 aa	Known RBP	4.83	□□□□□ -1.64
CDC34	YDR054C	RPL23B	P0CX42	137 aa	Known RBP	4.83	□□□□□ -1.64
CDC34	YDR054C	PAU13	P38725	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	LCB3	P47013	409 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	FYV6	P53913	173 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU10	Q03050	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU20	Q08322	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	RAD28	Q12021	506 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	ERV2	Q12284	196 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	YPR145C-A	Q2V2P0	78 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	PAU9	Q3E770	120 aa		4.83	□□□□□ -1.64
CDC34	YDR054C	FPR2	P32472	135 aa		4.82	□□□□□ -1.64
CDC34	YDR054C	ALK2	P32789	676 aa	Predicted RBP	4.82	□□□□□ -1.64
CDC34	YDR054C	CSH1	P38287	376 aa		4.82	□□□□□ -1.64
CDC34	YDR054C	TRS20	P38334	175 aa		4.82	□□□□□ -1.64
CDC34	YDR054C	YML122C	Q03207	126 aa		4.82	□□□□□ -1.64
CDC34	YDR054C	CDC7	P06243	507 aa		4.81	□□□□□ -1.64
CDC34	YDR054C	RPL42A	P0CX27	106 aa	Known RBP	4.81	□□□□□ -1.64
CDC34	YDR054C	RPL42B	P0CX28	106 aa	Known RBP	4.81	□□□□□ -1.64
CDC34	YDR054C	SUA7	P29055	345 aa	Predicted RBP	4.81	□□□□□ -1.64
CDC34	YDR054C	LSM2	P38203	95 aa	Known RBP	4.81	□□□□□ -1.64
CDC34	YDR054C	SNU13	P39990	126 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms