RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C KEG1P43614 200 aa3.78□□□□□ -1.8
CDC48YDL126C YGR164WP53291 111 aa3.78□□□□□ -1.8
CDC48YDL126C CPD1P53314 239 aa3.78□□□□□ -1.8
CDC48YDL126C PGA1P53896 198 aa3.78□□□□□ -1.8
CDC48YDL126C UPS1Q05776 175 aa3.78□□□□□ -1.8
CDC48YDL126C KEI1Q06346 221 aa3.78□□□□□ -1.8
CDC48YDL126C YDL157CQ12082 118 aa3.78□□□□□ -1.8
CDC48YDL126C YLR363W-AQ3E747 85 aa3.78□□□□□ -1.8
CDC48YDL126C RPS27AP35997 82 aaKnown RBP3.78□□□□□ -1.8
CDC48YDL126C RPS27BP38711 82 aa3.78□□□□□ -1.8
CDC48YDL126C PCP1P53259 346 aa3.78□□□□□ -1.8
CDC48YDL126C PAU12P53343 120 aa3.78□□□□□ -1.8
CDC48YDL126C YDR415CQ04033 374 aaPredicted RBP3.78□□□□□ -1.8
CDC48YDL126C RPS22BQ3E7Y3 130 aaKnown RBP3.78□□□□□ -1.8
CDC48YDL126C YBL112CQ3E7Y4 105 aa3.78□□□□□ -1.8
CDC48YDL126C MRS1P07266 363 aa3.77□□□□□ -1.81
CDC48YDL126C SCO1P23833 295 aa3.77□□□□□ -1.81
CDC48YDL126C RPA12P32529 125 aaKnown RBP3.77□□□□□ -1.81
CDC48YDL126C HOT13P36078 116 aa3.77□□□□□ -1.81
CDC48YDL126C EST3Q03096 181 aa3.77□□□□□ -1.81
CDC48YDL126C YLR296WQ05898 108 aa3.77□□□□□ -1.81
CDC48YDL126C FCY1Q12178 158 aa3.77□□□□□ -1.81
CDC48YDL126C RFM1Q12192 310 aa3.77□□□□□ -1.81
CDC48YDL126C YSF3P0C074 85 aaPredicted RBP3.77□□□□□ -1.81
CDC48YDL126C RPL20AP0CX23 172 aaKnown RBP3.77□□□□□ -1.81
CDC48YDL126C RPL20BP0CX24 172 aaPredicted RBP3.77□□□□□ -1.81
CDC48YDL126C ALK2P32789 676 aaPredicted RBP3.77□□□□□ -1.81
CDC48YDL126C TIM12P32830 109 aa3.77□□□□□ -1.81
CDC48YDL126C UTH1P36135 365 aa3.77□□□□□ -1.81
CDC48YDL126C UMP1P38293 148 aa3.77□□□□□ -1.81
CDC48YDL126C HTD2P38790 280 aaKnown RBP3.77□□□□□ -1.81
CDC48YDL126C DLS1P40366 167 aa3.77□□□□□ -1.81
CDC48YDL126C ATG41Q12048 136 aa3.77□□□□□ -1.81
CDC48YDL126C BOL1Q3E793 110 aa3.77□□□□□ -1.81
CDC48YDL126C YER039C-AP0CD97 72 aa3.76□□□□□ -1.81
CDC48YDL126C PET8P38921 284 aa3.76□□□□□ -1.81
CDC48YDL126C SNO3P43544 222 aa3.76□□□□□ -1.81
CDC48YDL126C BNS1P50084 137 aa3.76□□□□□ -1.81
CDC48YDL126C SBH1P52870 82 aa3.76□□□□□ -1.81
CDC48YDL126C BRR6P53062 197 aa3.76□□□□□ -1.81
CDC48YDL126C YGL230CP53074 147 aa3.76□□□□□ -1.81
CDC48YDL126C YGL034CP53186 121 aa3.76□□□□□ -1.81
CDC48YDL126C RPL15BP54780 204 aaPredicted RBP3.76□□□□□ -1.81
CDC48YDL126C NCE101Q02820 53 aa3.76□□□□□ -1.81
CDC48YDL126C YLR050CQ12155 161 aaKnown RBP3.76□□□□□ -1.81
CDC48YDL126C MCT1Q12283 360 aa3.76□□□□□ -1.81
CDC48YDL126C POR1P04840 283 aaKnown RBP3.76□□□□□ -1.81
CDC48YDL126C PAU2P32612 120 aa3.76□□□□□ -1.81
CDC48YDL126C SPT4P32914 102 aaPredicted RBP3.76□□□□□ -1.81
CDC48YDL126C HAC1P41546 238 aa3.76□□□□□ -1.81
CDC48YDL126C MSA1Q08471 629 aa3.76□□□□□ -1.81
CDC48YDL126C NAT5Q08689 176 aa3.76□□□□□ -1.81
CDC48YDL126C RDL2Q08742 149 aaKnown RBP3.76□□□□□ -1.81
CDC48YDL126C UBC5P15732 148 aa3.75□□□□□ -1.81
CDC48YDL126C YHR138CP38841 114 aaPredicted RBP3.75□□□□□ -1.81
CDC48YDL126C GEP7P53171 287 aa3.75□□□□□ -1.81
CDC48YDL126C FCY2P17064 533 aa3.75□□□□□ -1.81
CDC48YDL126C ATS1P31386 333 aa3.75□□□□□ -1.81
CDC48YDL126C YBL081WP38180 368 aaKnown RBP3.75□□□□□ -1.81
CDC48YDL126C ECM14P38836 430 aa3.75□□□□□ -1.81
CDC48YDL126C YEA4P40004 342 aa3.75□□□□□ -1.81
CDC48YDL126C XBP1P40489 647 aa3.75□□□□□ -1.81
CDC48YDL126C YJL213WP40896 331 aa3.75□□□□□ -1.81
CDC48YDL126C YPS5P53057 165 aa3.75□□□□□ -1.81
CDC48YDL126C YGR039WP53225 103 aa3.75□□□□□ -1.81
CDC48YDL126C CYR1P08678 2026 aaKnown RBP3.75□□□□□ -1.81
CDC48YDL126C RPB7P34087 171 aa3.74□□□□□ -1.81
CDC48YDL126C GPX1P36014 167 aa3.74□□□□□ -1.81
CDC48YDL126C YKR070WP36151 352 aaKnown RBP3.74□□□□□ -1.81
CDC48YDL126C MRPL27P36526 146 aaPredicted RBP3.74□□□□□ -1.81
CDC48YDL126C LSM2P38203 95 aaKnown RBP3.74□□□□□ -1.81
CDC48YDL126C CUP9P41817 306 aa3.74□□□□□ -1.81
CDC48YDL126C YFR045WP43617 309 aa3.74□□□□□ -1.81
CDC48YDL126C ERG25P53045 309 aa3.74□□□□□ -1.81
CDC48YDL126C YLR112WQ12130 139 aa3.74□□□□□ -1.81
CDC48YDL126C BEM2P39960 2167 aaKnown RBP3.74□□□□□ -1.81
CDC48YDL126C YPR117WQ06116 2489 aa3.74□□□□□ -1.81
CDC48YDL126C GLC7P32598 312 aaKnown RBP3.74□□□□□ -1.81
CDC48YDL126C PAU24P38155 120 aa3.74□□□□□ -1.81
CDC48YDL126C SDS24P38314 527 aa3.74□□□□□ -1.81
CDC48YDL126C ATX1P38636 73 aa3.74□□□□□ -1.81
CDC48YDL126C NRM1P53718 249 aa3.74□□□□□ -1.81
CDC48YDL126C FLO9P39712 1322 aa3.73□□□□□ -1.81
CDC48YDL126C RPL28P02406 149 aaKnown RBP3.73□□□□□ -1.81
CDC48YDL126C PHO85P17157 305 aa3.73□□□□□ -1.81
CDC48YDL126C YCR022CP25620 114 aa3.73□□□□□ -1.81
CDC48YDL126C PAM16P42949 149 aa3.73□□□□□ -1.81
CDC48YDL126C SDC1Q03323 175 aa3.73□□□□□ -1.81
CDC48YDL126C YMR252CQ04814 134 aa3.73□□□□□ -1.81
CDC48YDL126C ERV2Q12284 196 aa3.73□□□□□ -1.81
CDC48YDL126C SPS100P13130 326 aa3.73□□□□□ -1.81
CDC48YDL126C YHR180WP38868 163 aa3.73□□□□□ -1.81
CDC48YDL126C EGT2P42835 1041 aa3.73□□□□□ -1.81
CDC48YDL126C SCW4P53334 386 aaKnown RBP3.73□□□□□ -1.81
CDC48YDL126C COX12Q01519 83 aa3.73□□□□□ -1.81
CDC48YDL126C ADD37Q03233 198 aa3.73□□□□□ -1.81
CDC48YDL126C GRH1Q04410 372 aaKnown RBP3.73□□□□□ -1.81
CDC48YDL126C MIM1Q08176 113 aa3.73□□□□□ -1.81
CDC48YDL126C HRT1Q08273 121 aa3.73□□□□□ -1.81
CDC48YDL126C TAD3Q9URQ3 322 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms