RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YBR027CP38220 110 aa1.09□□□□□ -2.23
UBC9YDL064W GLC8P41818 229 aa1.09□□□□□ -2.23
UBC9YDL064W FMN1Q03778 218 aa1.09□□□□□ -2.23
UBC9YDL064W EFG1Q3E705 233 aaKnown RBP1.09□□□□□ -2.23
UBC9YDL064W SWR1Q05471 1514 aa1.09□□□□□ -2.24
UBC9YDL064W KOG1P38873 1557 aa1.08□□□□□ -2.24
UBC9YDL064W YCR001WP25347 104 aa1.08□□□□□ -2.24
UBC9YDL064W IPT1P38954 527 aa1.08□□□□□ -2.24
UBC9YDL064W YIL102CP40488 101 aa1.08□□□□□ -2.24
UBC9YDL064W IRC19Q07843 230 aa1.08□□□□□ -2.24
UBC9YDL064W YOL013W-AP0C272 63 aaPredicted RBP1.07□□□□□ -2.24
UBC9YDL064W SRP21P32342 167 aa1.07□□□□□ -2.24
UBC9YDL064W MRPL24P36525 258 aaPredicted RBP1.07□□□□□ -2.24
UBC9YDL064W YER181CP40097 107 aa1.07□□□□□ -2.24
UBC9YDL064W NMA1Q06178 401 aaKnown RBP1.07□□□□□ -2.24
UBC9YDL064W RFU1Q08003 200 aa1.07□□□□□ -2.24
UBC9YDL064W PBI2P0CT04 75 aaKnown RBP1.06□□□□□ -2.24
UBC9YDL064W PHO13P19881 312 aa1.06□□□□□ -2.24
UBC9YDL064W RCF2P53721 224 aa1.06□□□□□ -2.24
UBC9YDL064W RIF1P29539 1916 aa1.06□□□□□ -2.24
UBC9YDL064W FIG1P38224 298 aa1.05□□□□□ -2.24
UBC9YDL064W APS3P47064 194 aa1.05□□□□□ -2.24
UBC9YDL064W TMA23Q03525 211 aa1.05□□□□□ -2.24
UBC9YDL064W VAM10Q08474 114 aa1.04□□□□□ -2.24
UBC9YDL064W DDR48P18899 430 aaKnown RBP1.03□□□□□ -2.24
UBC9YDL064W PET20Q99373 253 aa1.03□□□□□ -2.24
UBC9YDL064W FMP49A0A023PZB3 126 aa1.02□□□□□ -2.25
UBC9YDL064W YGL041W-AP0C5N3 154 aa1.02□□□□□ -2.25
UBC9YDL064W ATG8P38182 117 aaRIP-Chip data1.01□□□□□ -2.25not detected
UBC9YDL064W ECM31P38122 312 aa1□□□□□ -2.25
UBC9YDL064W YNL122CP53921 115 aaPredicted RBP1□□□□□ -2.25
UBC9YDL064W YPR153WQ06537 140 aa1□□□□□ -2.25
UBC9YDL064W YPD1Q07688 167 aa1□□□□□ -2.25
UBC9YDL064W RRT7Q07829 113 aa1□□□□□ -2.25
UBC9YDL064W EST3Q03096 181 aa0.99□□□□□ -2.25
UBC9YDL064W SCS22Q6Q595 175 aa0.99□□□□□ -2.25
UBC9YDL064W BNI1P41832 1953 aa0.99□□□□□ -2.25
UBC9YDL064W ARC19P33204 171 aaKnown RBP0.98□□□□□ -2.25
UBC9YDL064W SED1Q01589 338 aa0.98□□□□□ -2.25
UBC9YDL064W GPI11Q06636 219 aa0.98□□□□□ -2.25
UBC9YDL064W ROM2P51862 1356 aaKnown RBP0.97□□□□□ -2.25
UBC9YDL064W IRC20Q06554 1556 aa0.97□□□□□ -2.25
UBC9YDL064W HYP2P23301 157 aaKnown RBP0.97□□□□□ -2.25
UBC9YDL064W HHY1P39982 102 aa0.97□□□□□ -2.25
UBC9YDL064W RIB3Q99258 208 aa0.97□□□□□ -2.25
UBC9YDL064W COX5BP00425 151 aa0.96□□□□□ -2.26
UBC9YDL064W PET54P10834 293 aa0.96□□□□□ -2.26
UBC9YDL064W GPI2P46961 280 aa0.96□□□□□ -2.26
UBC9YDL064W SEN15Q04675 128 aa0.96□□□□□ -2.26
UBC9YDL064W REV3P14284 1504 aa0.95□□□□□ -2.26
UBC9YDL064W HFA1P32874 2273 aa0.95□□□□□ -2.26
UBC9YDL064W HSP12P22943 109 aaKnown RBP0.95□□□□□ -2.26
UBC9YDL064W DIE2P50076 525 aa0.95□□□□□ -2.26
UBC9YDL064W TY1B-DR4Q07793 1604 aa0.95□□□□□ -2.26
UBC9YDL064W UBR1P19812 1950 aa0.95□□□□□ -2.26
UBC9YDL064W ECM5Q03214 1411 aa0.95□□□□□ -2.26
UBC9YDL064W HSL1P34244 1518 aa0.94□□□□□ -2.26
UBC9YDL064W NHP6AP11632 93 aaKnown RBP0.94□□□□□ -2.26
UBC9YDL064W IPI1P38803 334 aaPredicted RBP0.94□□□□□ -2.26
UBC9YDL064W MGR2Q02889 113 aa0.94□□□□□ -2.26
UBC9YDL064W YMR320WQ04897 101 aa0.94□□□□□ -2.26
UBC9YDL064W RPL33AP05744 107 aaKnown RBP0.93□□□□□ -2.26
UBC9YDL064W YGR201CP42936 225 aa0.93□□□□□ -2.26
UBC9YDL064W ATP19P81451 68 aa0.93□□□□□ -2.26
UBC9YDL064W MDS3P53094 1487 aa0.92□□□□□ -2.26
UBC9YDL064W BPT1P14772 1559 aa0.92□□□□□ -2.26
UBC9YDL064W MMS1Q06211 1407 aa0.92□□□□□ -2.26
UBC9YDL064W YCL001W-AP87012 153 aa0.92□□□□□ -2.26
UBC9YDL064W RAV2Q03956 351 aa0.92□□□□□ -2.26
UBC9YDL064W HIR3P47171 1648 aa0.92□□□□□ -2.26
UBC9YDL064W RPA190P10964 1664 aaKnown RBP0.91□□□□□ -2.26
UBC9YDL064W HAP2P06774 265 aa0.91□□□□□ -2.26
UBC9YDL064W YGL014C-AP0C5N1 53 aa0.91□□□□□ -2.26
UBC9YDL064W FYV5P25585 152 aa0.91□□□□□ -2.26
UBC9YDL064W PKR1Q03880 122 aaKnown RBP0.91□□□□□ -2.26
UBC9YDL064W YHR213W-BQ8TGK1 99 aa0.91□□□□□ -2.26
UBC9YDL064W CDC25P04821 1589 aa0.91□□□□□ -2.26
UBC9YDL064W CDC39P25655 2108 aaKnown RBP0.91□□□□□ -2.26
UBC9YDL064W YOR093CQ12275 1648 aa0.9□□□□□ -2.26
UBC9YDL064W RPS1BP23248 255 aaKnown RBP0.9□□□□□ -2.27
UBC9YDL064W MOG1P47123 218 aa0.9□□□□□ -2.27
UBC9YDL064W SOM1Q05676 74 aa0.9□□□□□ -2.27
UBC9YDL064W MYO2P19524 1574 aaKnown RBP0.9□□□□□ -2.27
UBC9YDL064W DNF1P32660 1571 aa0.9□□□□□ -2.27
UBC9YDL064W DNF2Q12675 1612 aa0.89□□□□□ -2.27
UBC9YDL064W ESC1Q03661 1658 aaKnown RBP0.89□□□□□ -2.27
UBC9YDL064W QCR6P00127 147 aa0.89□□□□□ -2.27
UBC9YDL064W YMR122CQ03879 124 aa0.89□□□□□ -2.27
UBC9YDL064W MHF1Q3E835 90 aa0.89□□□□□ -2.27
UBC9YDL064W YCF1P39109 1515 aaKnown RBP0.89□□□□□ -2.27
UBC9YDL064W RPO31P04051 1460 aa0.88□□□□□ -2.27
UBC9YDL064W RPS22AP0C0W1 130 aaKnown RBP0.88□□□□□ -2.27
UBC9YDL064W PHB1P40961 287 aa0.88□□□□□ -2.27
UBC9YDL064W YOR072WQ08486 104 aa0.88□□□□□ -2.27
UBC9YDL064W RPS22BQ3E7Y3 130 aaKnown RBP0.88□□□□□ -2.27
UBC9YDL064W NTE1Q04958 1679 aa0.88□□□□□ -2.27
UBC9YDL064W PEP1P32319 1579 aa0.87□□□□□ -2.27
UBC9YDL064W SSK2P53599 1579 aa0.87□□□□□ -2.27
UBC9YDL064W YOR1P53049 1477 aa0.87□□□□□ -2.27
UBC9YDL064W LST8P41318 303 aa0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms