RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W SWT21P53873 357 aaPredicted RBP4.5□□□□□ -1.69
RPT2YDL007W YNL092WP53934 400 aa4.5□□□□□ -1.69
RPT2YDL007W YPL080CQ02826 108 aa4.5□□□□□ -1.69
RPT2YDL007W RPL7BQ12213 244 aaKnown RBP4.5□□□□□ -1.69
RPT2YDL007W YIL102C-AQ2V2P5 75 aa4.5□□□□□ -1.69
RPT2YDL007W YNL162W-AQ3E7A8 72 aa4.5□□□□□ -1.69
RPT2YDL007W YOS1Q3E834 85 aa4.5□□□□□ -1.69
RPT2YDL007W POL2P21951 2222 aaKnown RBP4.5□□□□□ -1.69
RPT2YDL007W SPT15P13393 240 aaKnown RBP4.49□□□□□ -1.69
RPT2YDL007W MSI1P13712 422 aa4.49□□□□□ -1.69
RPT2YDL007W HYP2P23301 157 aaKnown RBP4.49□□□□□ -1.69
RPT2YDL007W LTP1P40347 161 aa4.49□□□□□ -1.69
RPT2YDL007W DSK2P48510 373 aa4.49□□□□□ -1.69
RPT2YDL007W COQ5P49017 307 aa4.49□□□□□ -1.69
RPT2YDL007W MIC27P50945 234 aa4.49□□□□□ -1.69
RPT2YDL007W YIP5P53108 310 aa4.49□□□□□ -1.69
RPT2YDL007W YGL118CP53132 145 aa4.49□□□□□ -1.69
RPT2YDL007W BRP1P53194 125 aa4.49□□□□□ -1.69
RPT2YDL007W MRPL19P53875 158 aa4.49□□□□□ -1.69
RPT2YDL007W AQR1P53943 586 aa4.49□□□□□ -1.69
RPT2YDL007W YOL118CQ08259 102 aa4.49□□□□□ -1.69
RPT2YDL007W FIT3Q08907 204 aa4.49□□□□□ -1.69
RPT2YDL007W POC4Q12245 148 aaPredicted RBP4.49□□□□□ -1.69
RPT2YDL007W YCR075W-AQ3E830 75 aa4.49□□□□□ -1.69
RPT2YDL007W YBR126W-AQ8TGU7 68 aa4.49□□□□□ -1.69
RPT2YDL007W YOR304C-AO14468 76 aa4.48□□□□□ -1.69
RPT2YDL007W CDC36P06100 191 aaPredicted RBP4.48□□□□□ -1.69
RPT2YDL007W HMRA1P0CY11 126 aa4.48□□□□□ -1.69
RPT2YDL007W SWD3P38123 315 aa4.48□□□□□ -1.69
RPT2YDL007W NTC20P38302 140 aaPredicted RBP4.48□□□□□ -1.69
RPT2YDL007W YAR068WP39564 161 aa4.48□□□□□ -1.69
RPT2YDL007W SAS2P40963 338 aa4.48□□□□□ -1.69
RPT2YDL007W YNR064CP53750 290 aa4.48□□□□□ -1.69
RPT2YDL007W VPS71Q03433 280 aa4.48□□□□□ -1.69
RPT2YDL007W YML079WQ03629 201 aa4.48□□□□□ -1.69
RPT2YDL007W YDR102CQ03864 110 aa4.48□□□□□ -1.69
RPT2YDL007W DPP1Q05521 289 aa4.48□□□□□ -1.69
RPT2YDL007W IRC19Q07843 230 aa4.48□□□□□ -1.69
RPT2YDL007W YOR186WQ08560 144 aa4.48□□□□□ -1.69
RPT2YDL007W PRM3Q08931 133 aa4.48□□□□□ -1.69
RPT2YDL007W YOR192C-CQ3E736 78 aa4.48□□□□□ -1.69
RPT2YDL007W CDC39P25655 2108 aaKnown RBP4.48□□□□□ -1.69
RPT2YDL007W MRS1P07266 363 aa4.47□□□□□ -1.69
RPT2YDL007W YHR138CP38841 114 aaPredicted RBP4.47□□□□□ -1.69
RPT2YDL007W SEC72P39742 193 aaKnown RBP4.47□□□□□ -1.69
RPT2YDL007W ARP3P47117 449 aaKnown RBP4.47□□□□□ -1.69
RPT2YDL007W SDS23P53172 527 aa4.47□□□□□ -1.69
RPT2YDL007W POP3P53833 195 aaPredicted RBP4.47□□□□□ -1.69
RPT2YDL007W BOR1P53838 576 aa4.47□□□□□ -1.69
RPT2YDL007W YML122CQ03207 126 aa4.47□□□□□ -1.69
RPT2YDL007W BET5Q03630 159 aa4.47□□□□□ -1.69
RPT2YDL007W YPR098CQ06089 161 aa4.47□□□□□ -1.69
RPT2YDL007W CYR1P08678 2026 aaKnown RBP4.47□□□□□ -1.69
RPT2YDL007W RPL12AP0CX53 165 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W RPL12BP0CX54 165 aa4.46□□□□□ -1.69
RPT2YDL007W RPL30P14120 105 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W SAG1P20840 650 aa4.46□□□□□ -1.69
RPT2YDL007W AIM17P23180 465 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W RPS2P25443 254 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W YUH1P35127 236 aa4.46□□□□□ -1.69
RPT2YDL007W ECM14P38836 430 aa4.46□□□□□ -1.69
RPT2YDL007W WSC2P53832 503 aa4.46□□□□□ -1.69
RPT2YDL007W RHO5P53879 331 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W YOR292CQ08743 309 aa4.46□□□□□ -1.69
RPT2YDL007W YRA1Q12159 226 aaKnown RBP4.46□□□□□ -1.69
RPT2YDL007W YDL180WQ12301 547 aa4.46□□□□□ -1.69
RPT2YDL007W INO4P13902 151 aa4.46□□□□□ -1.7
RPT2YDL007W MXR2P25566 168 aa4.46□□□□□ -1.7
RPT2YDL007W HSP150P32478 413 aa4.46□□□□□ -1.7
RPT2YDL007W LYS1P38998 373 aaRIP-Chip data4.46□□□□□ -1.7not detected
RPT2YDL007W LCL3P53153 274 aa4.46□□□□□ -1.7
RPT2YDL007W YNR048WP53740 393 aa4.46□□□□□ -1.7
RPT2YDL007W YFH1Q07540 174 aa4.46□□□□□ -1.7
RPT2YDL007W GRE1Q08969 168 aa4.46□□□□□ -1.7
RPT2YDL007W AYT1Q12226 474 aa4.46□□□□□ -1.7
RPT2YDL007W NAG1Q8TGN9 163 aa4.46□□□□□ -1.7
RPT2YDL007W YSF3P0C074 85 aaPredicted RBP4.45□□□□□ -1.7
RPT2YDL007W RPL23AP0CX41 137 aaKnown RBP4.45□□□□□ -1.7
RPT2YDL007W RPL23BP0CX42 137 aaKnown RBP4.45□□□□□ -1.7
RPT2YDL007W ARF1P11076 181 aaKnown RBP4.45□□□□□ -1.7
RPT2YDL007W MCH2P36032 473 aa4.45□□□□□ -1.7
RPT2YDL007W PCL7P40186 285 aa4.45□□□□□ -1.7
RPT2YDL007W CCS1P40202 249 aaKnown RBP4.45□□□□□ -1.7
RPT2YDL007W CRZ1P53968 678 aa4.45□□□□□ -1.7
RPT2YDL007W DIC1Q06143 298 aa4.45□□□□□ -1.7
RPT2YDL007W PRP46Q12417 451 aaPredicted RBP4.45□□□□□ -1.7
RPT2YDL007W ISD11Q6Q560 94 aa4.45□□□□□ -1.7
RPT2YDL007W YHR214C-EQ8TGK0 99 aa4.45□□□□□ -1.7
RPT2YDL007W YMR316C-AI2HB70 103 aa4.44□□□□□ -1.7
RPT2YDL007W PRS4P38063 326 aaPredicted RBP4.44□□□□□ -1.7
RPT2YDL007W ICS2P38284 255 aa4.44□□□□□ -1.7
RPT2YDL007W DOG2P38773 246 aa4.44□□□□□ -1.7
RPT2YDL007W SHO1P40073 367 aa4.44□□□□□ -1.7
RPT2YDL007W TIF34P40217 347 aaKnown RBP4.44□□□□□ -1.7
RPT2YDL007W SPG5P42933 373 aa4.44□□□□□ -1.7
RPT2YDL007W YFL065CP43539 102 aa4.44□□□□□ -1.7
RPT2YDL007W YFL015CP43578 164 aa4.44□□□□□ -1.7
RPT2YDL007W TDA7P53882 636 aaPredicted RBP4.44□□□□□ -1.7
RPT2YDL007W DYN2Q02647 92 aa4.44□□□□□ -1.7
RPT2YDL007W API2Q04413 109 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms