RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C NIP7Q08962 181 aaKnown RBP4.52□□□□□ -1.69
PDB1YBR221C DDP1Q99321 188 aaKnown RBP4.52□□□□□ -1.69
PDB1YBR221C TAD3Q9URQ3 322 aa4.52□□□□□ -1.69
PDB1YBR221C YPR170W-BP0C5R9 85 aa4.51□□□□□ -1.69
PDB1YBR221C BET1P22804 142 aa4.51□□□□□ -1.69
PDB1YBR221C URE2P23202 354 aaKnown RBP4.51□□□□□ -1.69
PDB1YBR221C RCN1P36054 211 aa4.51□□□□□ -1.69
PDB1YBR221C SDH4P37298 181 aa4.51□□□□□ -1.69
PDB1YBR221C SFT2P38166 215 aa4.51□□□□□ -1.69
PDB1YBR221C YHR130CP38834 111 aa4.51□□□□□ -1.69
PDB1YBR221C YEL028WP39989 153 aa4.51□□□□□ -1.69
PDB1YBR221C PFS2P42841 465 aaKnown RBP4.51□□□□□ -1.69
PDB1YBR221C WSC2P53832 503 aa4.51□□□□□ -1.69
PDB1YBR221C SWC7Q06707 132 aa4.51□□□□□ -1.69
PDB1YBR221C YML100W-AQ8TGT0 57 aa4.51□□□□□ -1.69
PDB1YBR221C CPR1P14832 162 aaKnown RBP4.5□□□□□ -1.69
PDB1YBR221C BGL2P15703 313 aaKnown RBP4.5□□□□□ -1.69
PDB1YBR221C HSP12P22943 109 aaKnown RBP4.5□□□□□ -1.69
PDB1YBR221C ZRT3P34240 503 aa4.5□□□□□ -1.69
PDB1YBR221C OM14P38325 134 aa4.5□□□□□ -1.69
PDB1YBR221C HTD2P38790 280 aaKnown RBP4.5□□□□□ -1.69
PDB1YBR221C AVT6P40074 448 aa4.5□□□□□ -1.69
PDB1YBR221C YNL208WP40159 199 aaKnown RBP4.5□□□□□ -1.69
PDB1YBR221C PHS1P40857 217 aa4.5□□□□□ -1.69
PDB1YBR221C GEP7P53171 287 aa4.5□□□□□ -1.69
PDB1YBR221C OSH6Q02201 448 aa4.5□□□□□ -1.69
PDB1YBR221C EST3Q03096 181 aa4.5□□□□□ -1.69
PDB1YBR221C YOL014WQ08110 124 aa4.5□□□□□ -1.69
PDB1YBR221C YPL264CQ08980 353 aa4.5□□□□□ -1.69
PDB1YBR221C ADH3P07246 375 aaKnown RBP4.49□□□□□ -1.69
PDB1YBR221C URA5P13298 226 aaKnown RBP4.49□□□□□ -1.69
PDB1YBR221C MRS4P23500 304 aa4.49□□□□□ -1.69
PDB1YBR221C SPC25P40014 221 aa4.49□□□□□ -1.69
PDB1YBR221C YNL200CP40165 246 aaKnown RBP4.49□□□□□ -1.69
PDB1YBR221C SYS1P41544 203 aa4.49□□□□□ -1.69
PDB1YBR221C BAT2P47176 376 aaKnown RBP4.49□□□□□ -1.69
PDB1YBR221C YCL001W-AP87012 153 aa4.49□□□□□ -1.69
PDB1YBR221C YDR415CQ04033 374 aaPredicted RBP4.49□□□□□ -1.69
PDB1YBR221C EMI1Q04406 187 aa4.49□□□□□ -1.69
PDB1YBR221C TIM22Q12328 207 aa4.49□□□□□ -1.69
PDB1YBR221C YAL063C-AQ3E791 96 aa4.49□□□□□ -1.69
PDB1YBR221C TRP1P00912 224 aa4.48□□□□□ -1.69
PDB1YBR221C YFL068WP0CX99 160 aa4.48□□□□□ -1.69
PDB1YBR221C YLL066W-AP0CY00 160 aa4.48□□□□□ -1.69
PDB1YBR221C YLL067W-AP0CY01 160 aa4.48□□□□□ -1.69
PDB1YBR221C ATR1P13090 542 aa4.48□□□□□ -1.69
PDB1YBR221C CDC43P18898 376 aa4.48□□□□□ -1.69
PDB1YBR221C RPB5P20434 215 aa4.48□□□□□ -1.69
PDB1YBR221C VMA11P32842 164 aa4.48□□□□□ -1.69
PDB1YBR221C YER188WP40103 239 aa4.48□□□□□ -1.69
PDB1YBR221C YFL019CP43576 117 aa4.48□□□□□ -1.69
PDB1YBR221C NCA3P46955 337 aa4.48□□□□□ -1.69
PDB1YBR221C YJL028WP47062 111 aa4.48□□□□□ -1.69
PDB1YBR221C YGL260WP53056 76 aa4.48□□□□□ -1.69
PDB1YBR221C YGR164WP53291 111 aa4.48□□□□□ -1.69
PDB1YBR221C KEI1Q06346 221 aa4.48□□□□□ -1.69
PDB1YBR221C SLD7Q08457 257 aa4.48□□□□□ -1.69
PDB1YBR221C UIP4Q08926 304 aa4.48□□□□□ -1.69
PDB1YBR221C YOR097CQ12274 175 aaPredicted RBP4.48□□□□□ -1.69
PDB1YBR221C RAD6P06104 172 aa4.47□□□□□ -1.69
PDB1YBR221C SGA1P08019 549 aa4.47□□□□□ -1.69
PDB1YBR221C TOM40P23644 387 aaKnown RBP4.47□□□□□ -1.69
PDB1YBR221C ARO2P28777 376 aaKnown RBP4.47□□□□□ -1.69
PDB1YBR221C MSA2P36157 363 aa4.47□□□□□ -1.69
PDB1YBR221C SHE1P38200 338 aa4.47□□□□□ -1.69
PDB1YBR221C YAR029WP39549 74 aa4.47□□□□□ -1.69
PDB1YBR221C MPM1P40364 252 aa4.47□□□□□ -1.69
PDB1YBR221C GAT4P40569 121 aa4.47□□□□□ -1.69
PDB1YBR221C HYR1P40581 163 aaKnown RBP4.47□□□□□ -1.69
PDB1YBR221C YMR103CQ04436 120 aa4.47□□□□□ -1.69
PDB1YBR221C YLR156WP0CE96 114 aa4.46□□□□□ -1.7
PDB1YBR221C YLR159WP0CE97 114 aa4.46□□□□□ -1.7
PDB1YBR221C YLR161WP0CE98 114 aa4.46□□□□□ -1.7
PDB1YBR221C COX10P21592 462 aa4.46□□□□□ -1.7
PDB1YBR221C TOD6P34219 525 aa4.46□□□□□ -1.7
PDB1YBR221C YKR073CP36153 106 aa4.46□□□□□ -1.7
PDB1YBR221C YER134CP40081 178 aa4.46□□□□□ -1.7
PDB1YBR221C PGU1P47180 361 aa4.46□□□□□ -1.7
PDB1YBR221C DOC1P53068 250 aa4.46□□□□□ -1.7
PDB1YBR221C ISD11Q6Q560 94 aa4.46□□□□□ -1.7
PDB1YBR221C CPA1P07258 411 aaKnown RBP4.45□□□□□ -1.7
PDB1YBR221C YET1P35723 206 aa4.45□□□□□ -1.7
PDB1YBR221C TEM1P38987 245 aa4.45□□□□□ -1.7
PDB1YBR221C YAR068WP39564 161 aa4.45□□□□□ -1.7
PDB1YBR221C YIL059CP40520 121 aa4.45□□□□□ -1.7
PDB1YBR221C DIM1P41819 318 aaKnown RBP4.45□□□□□ -1.7
PDB1YBR221C PAM16P42949 149 aa4.45□□□□□ -1.7
PDB1YBR221C YFR045WP43617 309 aa4.45□□□□□ -1.7
PDB1YBR221C RCE1Q03530 315 aa4.45□□□□□ -1.7
PDB1YBR221C YEL009C-AA0A023PZF2 135 aa4.44□□□□□ -1.7
PDB1YBR221C MDM35O60200 86 aa4.44□□□□□ -1.7
PDB1YBR221C HAP3P13434 144 aa4.44□□□□□ -1.7
PDB1YBR221C YCL042WP25572 119 aa4.44□□□□□ -1.7
PDB1YBR221C PUB1P32588 453 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
PDB1YBR221C FYV4P38783 130 aaPredicted RBP4.44□□□□□ -1.7
PDB1YBR221C YJR085CP47131 105 aaKnown RBP4.44□□□□□ -1.7
PDB1YBR221C SPG1P50088 95 aa4.44□□□□□ -1.7
PDB1YBR221C SAY1P53324 424 aa4.44□□□□□ -1.7
PDB1YBR221C YPL039WQ03080 316 aa4.44□□□□□ -1.7
PDB1YBR221C FCF1Q05498 189 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms