RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C RCF2P53721 224 aa2.59□□□□□ -2
NPL4YBR170C ELP6Q04868 273 aa2.59□□□□□ -2
NPL4YBR170C YLR162WQ06235 118 aa2.59□□□□□ -2
NPL4YBR170C YMR030W-AQ3E760 96 aa2.58□□□□□ -2
NPL4YBR170C YNL277W-AQ3E7Z0 62 aa2.58□□□□□ -2
NPL4YBR170C RPB7P34087 171 aa2.57□□□□□ -2
NPL4YBR170C HPA3P39979 161 aa2.57□□□□□ -2
NPL4YBR170C SPC24Q04477 213 aa2.57□□□□□ -2
NPL4YBR170C NKP2Q06162 153 aa2.57□□□□□ -2
NPL4YBR170C WIP1Q2V2P8 89 aa2.57□□□□□ -2
NPL4YBR170C ADE6P38972 1358 aaKnown RBP2.57□□□□□ -2
NPL4YBR170C HPM1P40481 377 aa2.56□□□□□ -2
NPL4YBR170C YGR017WP53210 297 aa2.56□□□□□ -2
NPL4YBR170C SLO1Q3E784 85 aa2.56□□□□□ -2
NPL4YBR170C YBL010CP32788 280 aa2.56□□□□□ -2
NPL4YBR170C YDL157CQ12082 118 aa2.56□□□□□ -2
NPL4YBR170C MRP49P32388 137 aa2.55□□□□□ -2
NPL4YBR170C EMC4P53073 190 aa2.55□□□□□ -2
NPL4YBR170C ATP19P81451 68 aa2.55□□□□□ -2
NPL4YBR170C IRC19Q07843 230 aa2.55□□□□□ -2
NPL4YBR170C FLX1P40464 311 aa2.54□□□□□ -2
NPL4YBR170C SDH7Q04401 133 aa2.54□□□□□ -2
NPL4YBR170C SFT1P43682 97 aa2.54□□□□□ -2
NPL4YBR170C VMA10P48836 114 aaKnown RBP2.54□□□□□ -2
NPL4YBR170C NMA1Q06178 401 aaKnown RBP2.54□□□□□ -2
NPL4YBR170C FRQ1Q06389 190 aa2.54□□□□□ -2
NPL4YBR170C ECM5Q03214 1411 aa2.53□□□□□ -2
NPL4YBR170C ETR1P38071 380 aa2.53□□□□□ -2
NPL4YBR170C HYR1P40581 163 aaKnown RBP2.53□□□□□ -2
NPL4YBR170C ELC1Q03071 99 aa2.53□□□□□ -2
NPL4YBR170C TVP18Q04767 167 aa2.53□□□□□ -2
NPL4YBR170C CYR1P08678 2026 aaKnown RBP2.53□□□□□ -2
NPL4YBR170C RPS25BP0C0T4 108 aaKnown RBP2.52□□□□□ -2.01
NPL4YBR170C RPS1AP33442 255 aaKnown RBP2.52□□□□□ -2.01
NPL4YBR170C VMA7P39111 118 aa2.52□□□□□ -2.01
NPL4YBR170C SPG1P50088 95 aa2.52□□□□□ -2.01
NPL4YBR170C KEI1Q06346 221 aa2.52□□□□□ -2.01
NPL4YBR170C RPS25AQ3E792 108 aaPredicted RBP2.52□□□□□ -2.01
NPL4YBR170C RPO41P13433 1351 aaKnown RBP2.52□□□□□ -2.01
NPL4YBR170C YKR070WP36151 352 aaKnown RBP2.51□□□□□ -2.01
NPL4YBR170C YAE1P47118 141 aaPredicted RBP2.51□□□□□ -2.01
NPL4YBR170C MZM1Q03429 123 aaPredicted RBP2.51□□□□□ -2.01
NPL4YBR170C SKI3P17883 1432 aaKnown RBP2.51□□□□□ -2.01
NPL4YBR170C YCR050CP25630 102 aa2.51□□□□□ -2.01
NPL4YBR170C LSM8P47093 109 aaKnown RBP2.51□□□□□ -2.01
NPL4YBR170C MET31Q03081 177 aa2.51□□□□□ -2.01
NPL4YBR170C RCE1Q03530 315 aa2.51□□□□□ -2.01
NPL4YBR170C YMR252CQ04814 134 aa2.51□□□□□ -2.01
NPL4YBR170C QCR8P08525 94 aa2.5□□□□□ -2.01
NPL4YBR170C YGL041W-AP0C5N3 154 aa2.5□□□□□ -2.01
NPL4YBR170C YHL042WP38729 150 aa2.5□□□□□ -2.01
NPL4YBR170C RPL13BP40212 199 aaKnown RBP2.5□□□□□ -2.01
NPL4YBR170C YCL001W-AP87012 153 aa2.5□□□□□ -2.01
NPL4YBR170C CWC27Q02770 301 aa2.5□□□□□ -2.01
NPL4YBR170C TMA23Q03525 211 aa2.5□□□□□ -2.01
NPL4YBR170C AVO2Q04749 426 aa2.5□□□□□ -2.01
NPL4YBR170C RPL13AQ12690 199 aaPredicted RBP2.5□□□□□ -2.01
NPL4YBR170C YLR099W-AQ3E798 87 aa2.5□□□□□ -2.01
NPL4YBR170C Q0144Q9ZZW2 109 aa2.5□□□□□ -2.01
NPL4YBR170C COX5BP00425 151 aa2.49□□□□□ -2.01
NPL4YBR170C RPS1BP23248 255 aaKnown RBP2.49□□□□□ -2.01
NPL4YBR170C YEL008WP40001 126 aa2.49□□□□□ -2.01
NPL4YBR170C PHS1P40857 217 aa2.49□□□□□ -2.01
NPL4YBR170C DIE2P50076 525 aa2.49□□□□□ -2.01
NPL4YBR170C YOR385WQ08909 290 aa2.49□□□□□ -2.01
NPL4YBR170C CMC4Q3E7A9 73 aa2.49□□□□□ -2.01
NPL4YBR170C SOM1Q05676 74 aa2.48□□□□□ -2.01
NPL4YBR170C SSN2P38931 1420 aa2.48□□□□□ -2.01
NPL4YBR170C UGX2P32772 223 aa2.48□□□□□ -2.01
NPL4YBR170C YNL146C-AQ3E7Z1 64 aa2.48□□□□□ -2.01
NPL4YBR170C YGL010WP25338 174 aa2.47□□□□□ -2.01
NPL4YBR170C FYV5P25585 152 aa2.47□□□□□ -2.01
NPL4YBR170C YAL064WP39711 94 aa2.47□□□□□ -2.01
NPL4YBR170C HUT1Q12520 339 aa2.47□□□□□ -2.01
NPL4YBR170C TAR1Q8TGM6 124 aa2.47□□□□□ -2.01
NPL4YBR170C DDP1Q99321 188 aaKnown RBP2.47□□□□□ -2.01
NPL4YBR170C YEL014CP39999 101 aa2.46□□□□□ -2.02
NPL4YBR170C YLR118CQ12354 227 aa2.46□□□□□ -2.02
NPL4YBR170C YPR153WQ06537 140 aa2.45□□□□□ -2.02
NPL4YBR170C AIM11P87275 137 aa2.45□□□□□ -2.02
NPL4YBR170C SAE3P89114 91 aa2.45□□□□□ -2.02
NPL4YBR170C APS2Q00381 147 aa2.45□□□□□ -2.02
NPL4YBR170C RAF1Q06891 181 aa2.45□□□□□ -2.02
NPL4YBR170C HSP150P32478 413 aa2.44□□□□□ -2.02
NPL4YBR170C GAT4P40569 121 aa2.44□□□□□ -2.02
NPL4YBR170C IGO1P53897 168 aa2.44□□□□□ -2.02
NPL4YBR170C IPT1P38954 527 aa2.43□□□□□ -2.02
NPL4YBR170C RIF1P29539 1916 aa2.43□□□□□ -2.02
NPL4YBR170C QCR10P37299 77 aa2.42□□□□□ -2.02
NPL4YBR170C SFT2P38166 215 aa2.42□□□□□ -2.02
NPL4YBR170C YIR021W-AQ3E739 70 aa2.42□□□□□ -2.02
NPL4YBR170C COA3Q3E7B2 85 aa2.42□□□□□ -2.02
NPL4YBR170C MYO2P19524 1574 aaKnown RBP2.41□□□□□ -2.02
NPL4YBR170C YOR304C-AO14468 76 aa2.41□□□□□ -2.02
NPL4YBR170C YCL042WP25572 119 aa2.41□□□□□ -2.02
NPL4YBR170C ECM31P38122 312 aa2.41□□□□□ -2.02
NPL4YBR170C YFL065CP43539 102 aa2.41□□□□□ -2.02
NPL4YBR170C GPI11Q06636 219 aa2.41□□□□□ -2.02
NPL4YBR170C HSL1P34244 1518 aa2.4□□□□□ -2.02
NPL4YBR170C YGL230CP53074 147 aa2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms