RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SPATA18Q8TC71 538 aa19.12■□□□□ 0.65
SSBP1-215ENST00000612337 ACBD6Q9BR61 282 aa19.12■□□□□ 0.65
SSBP1-215ENST00000612337 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
SSBP1-215ENST00000612337 GDAP2Q9NXN4 497 aa19.12■□□□□ 0.65
SSBP1-215ENST00000612337 NCOR2Q9Y618 2525 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 GOLGA8IPA6NC78 632 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 GOLGA8JA6NMD2 632 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 SOBPA7XYQ1 873 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 TULP1O00294 542 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 PRPF40AO75400 957 aaKnown RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 PRPF6O94906 941 aaKnown RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 MYL7Q01449 175 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 TNK2Q07912 1038 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 CCINQ13939 588 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 PON2Q15165 354 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 RSPO4Q2I0M5 234 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 ITPRIPL2Q3MIP1 535 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 INTS6LQ5JSJ4 861 aaKnown RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 CCDC65Q8IXS2 484 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 SYNPOQ8N3V7 929 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 CSGALNACT2Q8N6G5 542 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 PI4K2AQ9BTU6 479 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 SMG9Q9H0W8 520 aaKnown RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 PCIF1Q9H4Z3 704 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 ABCB6Q9NP58 842 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 DDX43Q9NXZ2 648 aaKnown RBP19.11■□□□□ 0.65
SSBP1-215ENST00000612337 GMEB2Q9UKD1 530 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 RAB23Q9ULC3 237 aa19.11■□□□□ 0.65
SSBP1-215ENST00000612337 KIAA0391O15091 583 aaKnown RBP19.1■□□□□ 0.65
SSBP1-215ENST00000612337 STX6O43752 255 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 CSH1P0DML2 217 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 CSH2P0DML3 217 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 AVPR1AP37288 418 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 GPR15P49685 360 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 RBP5P82980 135 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 BFSP1Q12934 665 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 SCARA3Q6AZY7 606 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 Q6ZS52 159 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 GPD1LQ8N335 351 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 TOP6BLQ8N6T0 577 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 PDILTQ8N807 584 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 MAB21L3Q8N8X9 362 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 FAM84AQ96KN4 292 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 TNMDQ9H2S6 317 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 PDE11AQ9HCR9 933 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 SIX4Q9UIU6 781 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 SNX9Q9Y5X1 595 aa19.1■□□□□ 0.65
SSBP1-215ENST00000612337 ZNF638Q14966 1978 aaKnown RBP19.1■□□□□ 0.65
SSBP1-215ENST00000612337 OBSL1O75147 1896 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 KRT19P08727 400 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 TMEM191BP0C7N4 346 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 SDHBP21912 280 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 TGM1P22735 817 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 ACAT1P24752 427 aaKnown RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 RPL10AP62906 217 aaKnown RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 STK38Q15208 465 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 LAIR1Q6GTX8 287 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 STXBP4Q6ZWJ1 553 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 MON1AQ86VX9 555 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 OSTM1Q86WC4 334 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 LINC00301Q8NCQ3 95 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 NOC3LQ8WTT2 800 aaKnown RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 MRPS31Q92665 395 aaKnown RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 USP13Q92995 863 aaPredicted RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 PKMYT1Q99640 499 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 FAM83CQ9BQN1 747 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 MTMR12Q9C0I1 747 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 LRRC27Q9C0I9 530 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 KIF9Q9HAQ2 790 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 GKN1Q9NS71 199 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 UXTQ9UBK9 157 aaPredicted RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 MAGED2Q9UNF1 606 aaPredicted RBP19.09■□□□□ 0.65
SSBP1-215ENST00000612337 CCL26Q9Y258 94 aa19.09■□□□□ 0.65
SSBP1-215ENST00000612337 PRR5-ARHGAP8B1AHC4 643 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 K7ESF4 209 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 GABRDO14764 452 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 NOL4O94818 638 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 CYP2F1P24903 491 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 PCSK1P29120 753 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 LHX1P48742 406 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 ARHGAP8P85298 464 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 LMNB2Q03252 620 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 ZNF268Q14587 947 aaPredicted RBP19.08■□□□□ 0.64
SSBP1-215ENST00000612337 DDR2Q16832 855 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 SDHAF4Q5VUM1 108 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 TXNDC8Q6A555 127 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 LONP2Q86WA8 852 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 ADGRF2Q8IZF7 708 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 STKLD1Q8NE28 680 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 TRMT2BQ96GJ1 504 aaKnown RBP19.08■□□□□ 0.64
SSBP1-215ENST00000612337 ANKRD36BP1Q96IX9 119 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 HPS4Q9NQG7 708 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 TDP1Q9NUW8 608 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 INTS13Q9NVM9 706 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 KBTBD4Q9NVX7 518 aa19.08■□□□□ 0.64
SSBP1-215ENST00000612337 MED19A0JLT2 244 aaPredicted RBP19.07■□□□□ 0.64
SSBP1-215ENST00000612337 ZNF233A6NK53 670 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 CHURC1-FNTBB4DL54 471 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms