RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 FGFBP2Q9BYJ0 223 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
XRCC1-205ENST00000595789 HPS4Q9NQG7 708 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 TBC1D7Q9P0N9 293 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 RAB23Q9ULC3 237 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 L1RE1Q9UN81 338 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 AGAP1Q9UPQ3 857 aa16■□□□□ 0.15
XRCC1-205ENST00000595789 SOBPA7XYQ1 873 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 GARTP22102 1010 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 POLR2BP30876 1174 aaKnown RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 TFAMQ00059 246 aaKnown RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 TAF12Q16514 161 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 NFE2Q16621 373 aaPredicted RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 TXNDC8Q6A555 127 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 PKN3Q6P5Z2 889 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 PRR23BQ6ZRT6 265 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 MAB21L3Q8N8X9 362 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 LEO1Q8WVC0 666 aaPredicted RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 ZNF560Q96MR9 790 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 GCNAQ96QF7 691 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 ACBD6Q9BR61 282 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 PI4K2AQ9BTU6 479 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 THG1LQ9NWX6 298 aaKnown RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 EXOC7Q9UPT5 735 aa15.99■□□□□ 0.15
XRCC1-205ENST00000595789 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
XRCC1-205ENST00000595789 A0A087X0B3 334 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 DCDC2BA2VCK2 349 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 EXTL3O43909 919 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 PRPF40AO75400 957 aaKnown RBP15.98■□□□□ 0.15
XRCC1-205ENST00000595789 TADA3O75528 432 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
XRCC1-205ENST00000595789 ITGB3P05106 788 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 PDCP20941 246 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 DDX6P26196 483 aaKnown RBP eCLIP15.98■□□□□ 0.15
XRCC1-205ENST00000595789 TSPY1Q01534 308 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 RUNX3Q13761 415 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 TMEM196Q5HYL7 178 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 SDHAF4Q5VUM1 108 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 HEATR6Q6AI08 1181 aaKnown RBP15.98■□□□□ 0.15
XRCC1-205ENST00000595789 TRIM68Q6AZZ1 485 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 FSTL4Q6MZW2 842 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 MON1AQ86VX9 555 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 OSTM1Q86WC4 334 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 LRRC52Q8N7C0 313 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 MYRFLQ96LU7 910 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 CBWD1Q9BRT8 395 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 SEMA4GQ9NTN9 838 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 TDP1Q9NUW8 608 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 GDAP2Q9NXN4 497 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 SIX4Q9UIU6 781 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 CDV3Q9UKY7 258 aaKnown RBP15.98■□□□□ 0.15
XRCC1-205ENST00000595789 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
XRCC1-205ENST00000595789 KIF26AQ9ULI4 1882 aaPredicted RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 GOLGA8IPA6NC78 632 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 GOLGA8JA6NMD2 632 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 TRDMT1O14717 391 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 GABRDO14764 452 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 NOL4O94818 638 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 GCNT3O95395 438 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CSH1P0DML2 217 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CSH2P0DML3 217 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 SYT1P21579 422 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 ACAT1P24752 427 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CYP2F1P24903 491 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 AVPR1AP37288 418 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CSRP2Q16527 193 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 DDR2Q16832 855 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CCDC142Q17RM4 750 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 INTS6LQ5JSJ4 861 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 LIMS2Q7Z4I7 341 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 TMEM86AQ8N2M4 240 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CSGALNACT2Q8N6G5 542 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 PANK2Q9BZ23 570 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 EBF3Q9H4W6 596 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 FBRSL1Q9HCM7 1045 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 PDE11AQ9HCR9 933 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 ABCB6Q9NP58 842 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 DDX43Q9NXZ2 648 aaKnown RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 RBAKQ9NYW8 714 aaPredicted RBP15.97■□□□□ 0.15
XRCC1-205ENST00000595789 GTF3C4Q9UKN8 822 aa15.97■□□□□ 0.15
XRCC1-205ENST00000595789 SLC30A4O14863 429 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 HCRTO43612 131 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 HUS1O60921 280 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 ARSAP15289 507 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
XRCC1-205ENST00000595789 ALCAMQ13740 583 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 SLC39A14Q15043 492 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 FAM160A2Q8N612 972 aaPredicted RBP15.96■□□□□ 0.15
XRCC1-205ENST00000595789 SPATA18Q8TC71 538 aa15.96■□□□□ 0.15
XRCC1-205ENST00000595789 MRPS31Q92665 395 aaKnown RBP15.96■□□□□ 0.15
XRCC1-205ENST00000595789 TRMT2BQ96GJ1 504 aaKnown RBP15.96■□□□□ 0.15
XRCC1-205ENST00000595789 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms