RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PDE6CP51160 858 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 SMTNP53814 917 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 MCL1Q07820 350 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 BFSP1Q12934 665 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 STRN3Q13033 797 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 NR1H3Q13133 447 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 ZBTB6Q15916 424 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 ZNF423Q2M1K9 1284 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 SLC10A6Q3KNW5 377 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 PEAR1Q5VY43 1037 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-215ENST00000592911 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 CEP295NLQ96MC4 621 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 P2RY13Q9BPV8 354 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 TCHPQ9BT92 498 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 BHMT2Q9H2M3 363 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 TMEM206Q9H813 350 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 HPS4Q9NQG7 708 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 KMT5AQ9NQR1 393 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 GKN1Q9NS71 199 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 TDP1Q9NUW8 608 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 UXTQ9UBK9 157 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-215ENST00000592911 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 DERAQ9Y315 318 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 ASXL3Q9C0F0 2248 aa9.44□□□□□ -0.9
SMAD4-215ENST00000592911 FREM2Q5SZK8 3169 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 URB1O60287 2271 aaKnown RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 CCDC169A6NNP5 214 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 BHMG1C9JSJ3 638 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 CLDN3O15551 220 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 ALDH1A2O94788 518 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 PRAMEF12O95522 483 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 LIG1P18858 919 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 DGKEP52429 567 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 PEX3P56589 373 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 RING1Q06587 406 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 TNK2Q07912 1038 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 DMC1Q14565 340 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 SAFBQ15424 915 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 DIS3L2Q8IYB7 885 aaKnown RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 TSTD1Q8NFU3 115 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 CEP76Q8TAP6 659 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 SPATA18Q8TC71 538 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 C18orf25Q96B23 403 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 ZFYVE19Q96K21 471 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 KIFC3Q9BVG8 833 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 NUSAP1Q9BXS6 441 aaKnown RBP9.43□□□□□ -0.9
SMAD4-215ENST00000592911 SLC46A2Q9BY10 475 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 CCSER1Q9C0I3 900 aa9.43□□□□□ -0.9
SMAD4-215ENST00000592911 BTBD18B2RXH4 712 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 LAD1O00515 517 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 LARGE1O95461 756 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 EGFP01133 1207 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CSH1P0DML2 217 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CSH2P0DML3 217 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 GUCY2CP25092 1073 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 GJA4P35212 333 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 EIF2DP41214 584 aaKnown RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 LILRA4P59901 499 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ANAPC15P60006 121 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 MRPS21P82921 87 aaKnown RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 FAM160A1Q05DH4 1040 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 STK3Q13188 491 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CCDC6Q16204 474 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TAF12Q16514 161 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 NFE2Q16621 373 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 STXBP5Q5T5C0 1151 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TCEAL6Q6IPX3 200 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 PKN3Q6P5Z2 889 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 SLC23A3Q6PIS1 610 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 DSTYKQ6XUX3 929 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 PIP4P1Q86T03 277 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 MON1AQ86VX9 555 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 PROSER1Q86XN7 944 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 SYT12Q8IV01 421 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 OLIG1Q8TAK6 271 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 LEO1Q8WVC0 666 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 OSCP1Q8WVF1 389 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 MRPS31Q92665 395 aaKnown RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CD101Q93033 1021 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TCEAL3Q969E4 200 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TRMT2BQ96GJ1 504 aaKnown RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 SPACA7Q96KW9 195 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TARS2Q9BW92 718 aaKnown RBP9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ZCWPW1Q9H0M4 648 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ECT2Q9H8V3 914 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ANKFY1Q9P2R3 1169 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms