RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MIA3Q5JRA6 1907 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 ARNTLO00327 626 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 EIF3DO15371 548 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP50-205ENST00000419387 POLR2DO15514 142 aaKnown RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 F13A1P00488 732 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 HOXD13P35453 343 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 CYP4F8P98187 520 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 MYL7Q01449 175 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 NFE2Q16621 373 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 DUOXA2Q1HG44 320 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 LMBRD2Q68DH5 695 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 ATL3Q6DD88 541 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 EPM2AIP1Q7L775 607 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 CSGALNACT1Q8TDX6 532 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 FAM84AQ96KN4 292 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 LRRC3BQ96PB8 259 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 PI4K2AQ9BTU6 479 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 MTMR12Q9C0I1 747 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 C8orf33Q9H7E9 229 aaPredicted RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 LMAN1LQ9HAT1 526 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 MAGEF1Q9HAY2 307 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 KIAA1586Q9HCI6 787 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 INTS13Q9NVM9 706 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 DDX43Q9NXZ2 648 aaKnown RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 HSPBP1Q9NZL4 362 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 SIX4Q9UIU6 781 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 ZMYM5Q9UJ78 669 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 PCDHA7Q9UN72 937 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 ZDHHC9Q9Y397 364 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
NUP50-205ENST00000419387 SNX9Q9Y5X1 595 aa10.14□□□□□ -0.79
NUP50-205ENST00000419387 TSC2P49815 1807 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 GABRDO14764 452 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 KINO60870 393 aaKnown RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 TNNC2P02585 160 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 F11P03951 625 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 CSH1P0DML2 217 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 CSH2P0DML3 217 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 CCNE1P24864 410 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 LHX1P48742 406 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 KPNA1P52294 538 aaPredicted RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 MYO1EQ12965 1108 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 MTAPQ13126 283 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 ARHGAP29Q52LW3 1261 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 INTS6LQ5JSJ4 861 aaKnown RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 C1orf228Q6PIY5 440 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 UNC13DQ70J99 1090 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 CBWD2Q8IUF1 395 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 MSANTD3Q96H12 275 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 IER2Q9BTL4 223 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 SLC46A2Q9BY10 475 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 CHRDQ9H2X0 955 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 FAM13BQ9NYF5 915 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 GTF3C4Q9UKN8 822 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 CFAP45Q9UL16 551 aa10.13□□□□□ -0.79
NUP50-205ENST00000419387 RIF1Q5UIP0 2472 aaKnown RBP10.13□□□□□ -0.79
NUP50-205ENST00000419387 PVALEFA0A1B0GWK0 134 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 MYBPHLA2RUH7 354 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 CLIC2O15247 247 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 CHRNB1P11230 501 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ACAT1P24752 427 aaKnown RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 CYP2F1P24903 491 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 DDX6P26196 483 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP50-205ENST00000419387 PCSK1P29120 753 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 CASP1P29466 404 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ME1P48163 572 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 SOX9P48436 509 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 GPR15P49685 360 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 NLRP12P59046 1061 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 EHHADHQ08426 723 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 DDR2Q16832 855 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 SOWAHAQ2M3V2 549 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 RESP18Q5W5W9 173 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 TMEM150AQ86TG1 271 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 WDR49Q8IV35 697 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 NELFCDQ8IXH7 590 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ADGRF2Q8IZF7 708 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 CMTM8Q8IZV2 173 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 CELF5Q8N6W0 485 aaKnown RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 MAB21L3Q8N8X9 362 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms