RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 TSC2P49815 1807 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 KRT37O76014 449 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 DRD1P21728 446 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 IFNAR2P48551 515 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 POU5F1Q01860 360 aaKnown RBP16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 PDGFRLQ15198 375 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 ELF2Q15723 593 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 CCDC6Q16204 474 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 TXNDC8Q6A555 127 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 TRIM68Q6AZZ1 485 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 BRAPQ7Z569 592 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 SYCP3Q8IZU3 236 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 C2orf42Q9NWW7 574 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
SBDSP1-201ENST00000415772 TCHHQ07283 1943 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 TISP43B9A030 160 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 RNF40O75150 1001 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 LDHAP00338 332 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 ITGB3P05106 788 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 CKMP06732 381 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 KRT19P08727 400 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 DDIT3P35638 169 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 NR1H3Q13133 447 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SF3A2Q15428 464 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SF3A1Q15459 793 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 FBXO43Q4G163 708 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 TMEM196Q5HYL7 178 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 WDR44Q5JSH3 913 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 LRRTM3Q86VH5 581 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SFR1Q86XK3 245 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SPATA2LQ8IUW3 424 aaPredicted RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 CAMKK1Q8N5S9 505 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 USP13Q92995 863 aaPredicted RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 ACCSQ96QU6 501 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 FAM83CQ9BQN1 747 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 FAM213AQ9BRX8 229 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 DDX43Q9NXZ2 648 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 CCL26Q9Y258 94 aa16.75■□□□□ 0.27
SBDSP1-201ENST00000415772 SOBPA7XYQ1 873 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 AKAP3O75969 853 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 EPN2O95208 641 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 GCNT3O95395 438 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 F11P03951 625 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 USP17L7P0C7H9 530 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 ZNF806P0C7X5 589 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 POLR2BP30876 1174 aaKnown RBP16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 CUL4AQ13619 759 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 MON1AQ86VX9 555 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 SCN4BQ8IWT1 228 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 TMEM86AQ8N2M4 240 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 CCDC26Q8TAB7 109 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 ATP2A3Q93084 1043 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 ACDQ96AP0 544 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 ST6GALNAC4Q9H4F1 302 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 HPS4Q9NQG7 708 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
SBDSP1-201ENST00000415772 KIF26AQ9ULI4 1882 aaPredicted RBP16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 CEP250Q9BV73 2442 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 TRAV19A0A0A6YYK7 116 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 RHOBTB1O94844 696 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 EGFP01133 1207 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 TMEM191BP0C7N4 346 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 IDEP14735 1019 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 ARSAP15289 507 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 GAP43P17677 238 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 GBP1P32455 592 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 GPR15P49685 360 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 KCNB1Q14721 858 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 MTF1Q14872 753 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 DDR2Q16832 855 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 SDHAF4Q5VUM1 108 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 PKN3Q6P5Z2 889 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 SV2BQ7L1I2 683 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 STKLD1Q8NE28 680 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 CD101Q93033 1021 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 HHIPQ96QV1 700 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 ACBD6Q9BR61 282 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 RBAKQ9NYW8 714 aaPredicted RBP16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 STK17AQ9UEE5 414 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 PCDHB13Q9Y5F0 798 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
SBDSP1-201ENST00000415772 STYXL1Q9Y6J8 313 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms