RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 MYMKA6NI61 221 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 AMPD2Q01433 879 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 LPAL2Q16609 132 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 TMEM196Q5HYL7 178 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 RRAGBQ5VZM2 374 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 SV2BQ7L1I2 683 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.88■□□□□ 0.93
HDAC11-205ENST00000404548 PDCL2Q8N4E4 241 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 C1orf127Q8N9H9 656 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 CXorf38Q8TB03 319 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 CACTINQ8WUQ7 758 aaKnown RBP20.88■□□□□ 0.93
HDAC11-205ENST00000404548 FAM213AQ9BRX8 229 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 IKZF4Q9H2S9 585 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 SEMA4GQ9NTN9 838 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 TDP1Q9NUW8 608 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 GDAP2Q9NXN4 497 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 UXTQ9UBK9 157 aaPredicted RBP20.88■□□□□ 0.93
HDAC11-205ENST00000404548 ITGA11Q9UKX5 1188 aa20.88■□□□□ 0.93
HDAC11-205ENST00000404548 TRDMT1O14717 391 aaKnown RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 SLC30A4O14863 429 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 POLR2BP30876 1174 aaKnown RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 RPL10AP62906 217 aaKnown RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 KCNA1Q09470 495 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 BFSP1Q12934 665 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 RUNX3Q13761 415 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 MON1AQ86VX9 555 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 TTC8Q8TAM2 541 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 MRPS31Q92665 395 aaKnown RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 USP13Q92995 863 aaPredicted RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 MYRFLQ96LU7 910 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 PKMYT1Q99640 499 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 HPS4Q9NQG7 708 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 GKN1Q9NS71 199 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 TMLHEQ9NVH6 421 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 RBAKQ9NYW8 714 aaPredicted RBP20.87■□□□□ 0.93
HDAC11-205ENST00000404548 L1RE1Q9UN81 338 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 CLIC4Q9Y696 253 aa20.87■□□□□ 0.93
HDAC11-205ENST00000404548 TCHHQ07283 1943 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 HUS1O60921 280 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 ATG13O75143 517 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 NOL4O94818 638 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 ITGB3P05106 788 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 WNT7BP56706 349 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 TFAMQ00059 246 aaKnown RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 MYL7Q01449 175 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 GRSF1Q12849 480 aaKnown RBP eCLIP20.86■□□□□ 0.933e-6■■□□□ 12.8
HDAC11-205ENST00000404548 PDGFRLQ15198 375 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 CFAP221Q4G0U5 840 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 INTS6LQ5JSJ4 861 aaKnown RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 CCDC73Q6ZRK6 1079 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 PRR23CQ6ZRP0 262 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 MAB21L3Q8N8X9 362 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 FUBP3Q96I24 572 aaKnown RBP eCLIP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 LOXL4Q96JB6 756 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 SMG9Q9H0W8 520 aaKnown RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 C2orf42Q9NWW7 574 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 AGAP1Q9UPQ3 857 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 CCL26Q9Y258 94 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 KMT2BQ9UMN6 2715 aaPredicted RBP20.86■□□□□ 0.93
HDAC11-205ENST00000404548 DENND4CQ5VZ89 1909 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 CHD8Q9HCK8 2581 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 CACNA1BQ00975 2339 aa20.86■□□□□ 0.93
HDAC11-205ENST00000404548 KIAA0391O15091 583 aaKnown RBP20.85■□□□□ 0.93
HDAC11-205ENST00000404548 EXTL3O43909 919 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 PRPF40AO75400 957 aaKnown RBP20.85■□□□□ 0.93
HDAC11-205ENST00000404548 GCNT3O95395 438 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 TOP6BLQ8N6T0 577 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 EXOC4Q96A65 974 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 CHFRQ96EP1 664 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 TMEM206Q9H813 350 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 DDX43Q9NXZ2 648 aaKnown RBP20.85■□□□□ 0.93
HDAC11-205ENST00000404548 LAMA1P25391 3075 aa20.85■□□□□ 0.93
HDAC11-205ENST00000404548 GABRDO14764 452 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 TADA3O75528 432 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 AKAP3O75969 853 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 PCSK1P29120 753 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 LHX1P48742 406 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 RESTQ13127 1097 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 SRSF5Q13243 272 aaKnown RBP20.84■□□□□ 0.93
HDAC11-205ENST00000404548 TXNDC8Q6A555 127 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 HEATR6Q6AI08 1181 aaKnown RBP20.84■□□□□ 0.93
HDAC11-205ENST00000404548 FSTL4Q6MZW2 842 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 DPH6Q7L8W6 267 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 FAM160A2Q8N612 972 aaPredicted RBP20.84■□□□□ 0.93
HDAC11-205ENST00000404548 SAAL1Q96ER3 474 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 CEP295NLQ96MC4 621 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 PI4K2AQ9BTU6 479 aa20.84■□□□□ 0.93
HDAC11-205ENST00000404548 OTOL1A6NHN0 477 aaPredicted RBP20.83■□□□□ 0.93
HDAC11-205ENST00000404548 DRD1P21728 446 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 CASP5P51878 434 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 RBP5P82980 135 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 FAM160A1Q05DH4 1040 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 FBXO43Q4G163 708 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 CC2D1AQ6P1N0 951 aaPredicted RBP20.83■□□□□ 0.93
HDAC11-205ENST00000404548 CEP68Q76N32 757 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 LIMS2Q7Z4I7 341 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 SYCP3Q8IZU3 236 aa20.83■□□□□ 0.93
HDAC11-205ENST00000404548 CAMKK1Q8N5S9 505 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms