RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 SPATA17Q96L03 361 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 SNX25Q9H3E2 840 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 PNMA6FA0A0J9YX94 578 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 DDX3YO15523 660 aaKnown RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 SGPL1O95470 568 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 CYP19A1P11511 503 aaPredicted RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 RRM1P23921 792 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 TRPC1P48995 793 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 RPS6KA2Q15349 733 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 DCLK3Q9C098 648 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 NMUR2Q9GZQ4 415 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 TMEM206Q9H813 350 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 SORBS3O60504 671 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 PENKP01210 267 aaPredicted RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 CSF1RP07333 972 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CDK8P49336 464 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CEP55Q53EZ4 464 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 NCCRP1Q6ZVX7 275 aaPredicted RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 TNFRSF25Q93038 417 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 ERLEC1Q96DZ1 483 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 LRRC4CQ9HCJ2 640 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 RSL24D1Q9UHA3 163 aaKnown RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 CCPG1Q9ULG6 757 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 AP4S1Q9Y587 144 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 ADGRA3Q8IWK6 1321 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 TCRBV7S2A1N4TA0A589 114 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 SNRPAP09012 282 aaKnown RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 NEK2P51955 445 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 EPHA7Q15375 998 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 DAGLBQ8NCG7 672 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 FBXO36Q8NEA4 188 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 PARVBQ9HBI1 364 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 C20orf96Q9NUD7 363 aaPredicted RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 DAPK2Q9UIK4 370 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 GPR75-ASB3A0A0A6YYF3 556 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 OR6B1O95007 311 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 STMN1P16949 149 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 VCAM1P19320 739 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CCNG1P51959 295 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 LMBRD2Q68DH5 695 aaPredicted RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 ITPRIPL1Q6GPH6 555 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 ASRGL1Q7L266 308 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 ASB3Q9Y575 518 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CERKLQ49MI3 558 aaPredicted RBP17.35■□□□□ 0.37
PACS1-201ENST00000320580 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 RAPH1Q70E73 1250 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 RNF148Q8N7C7 305 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 SLC35C1Q96A29 364 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 NACC1Q96RE7 527 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 TMEM79Q9BSE2 394 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CNGB3Q9NQW8 809 aa17.35■□□□□ 0.37
PACS1-201ENST00000320580 CDH3P22223 829 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 MAPK10P53779 464 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 PLOD1Q02809 727 aaPredicted RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 ITGADQ13349 1161 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 CYGBQ8WWM9 190 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 MRPS26Q9BYN8 205 aaKnown RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 CCDC90BQ9GZT6 254 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 C12orf65Q9H3J6 166 aaKnown RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 AURKCQ9UQB9 309 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 AKAP10O43572 662 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 POLR2MP0CAP2 368 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 HSPA8P11142 646 aaKnown RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 PPARGP37231 505 aaPredicted RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 OR52E8Q6IFG1 317 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 TRNAU1APQ9NX07 287 aaKnown RBP17.34■□□□□ 0.37
PACS1-201ENST00000320580 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 MAP3K13O43283 966 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 BTDP43251 543 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 LSAMPQ13449 338 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 PTK6Q13882 451 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 SIX5Q8N196 739 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 SIX6OS1Q8N1H7 587 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 TSPAN14Q8NG11 270 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 ATAD3AQ9NVI7 634 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 DNAJC16Q9Y2G8 782 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 PCDHA3Q9Y5H8 950 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
PACS1-201ENST00000320580 KRT8P05787 483 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 MRPS22P82650 360 aaKnown RBP17.33■□□□□ 0.37
PACS1-201ENST00000320580 NCOA4Q13772 614 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 CEP95Q96GE4 821 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 TRIM17Q9Y577 477 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 PEX2P28328 305 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 SERPINB1P30740 379 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 AQP4P55087 323 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 MROH9Q5TGP6 573 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 RMND5BQ96G75 393 aaPredicted RBP17.33■□□□□ 0.37
PACS1-201ENST00000320580 AP4B1Q9Y6B7 739 aa17.33■□□□□ 0.37
PACS1-201ENST00000320580 F8W8V4 182 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms