RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Ppp1r12aQ9DBR7 1029 aaKnown RBP15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Mta2Q9R190 668 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Prkaa1Q5EG47 559 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Dpysl3Q62188 570 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tm4sf1Q64302 202 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Zfp263Q8CF60 680 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Q9D2Q3 444 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Rilpl1Q9JJC6 406 aa15.82■□□□□ 0.12
Usp4-201ENSMUST00000035237 Lipo2D3YY49 398 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Vmn2r15L7N2A0 855 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Per2O54943 1257 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Fgfr1P16092 822 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 NfibP97863 570 aaKnown RBP15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tdpoz2Q717B2 364 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Raver2Q7TPD6 673 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Vmn2r43Q80Z08 845 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Creb3l2Q8BH52 521 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Rhpn2Q8BWR8 686 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 HscbQ8K3A0 234 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Stx18Q8VDS8 334 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Catsper1Q91ZR5 686 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Rnf225Q9D7D1 332 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 ParvaQ9EPC1 372 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Myh11O08638 1972 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Fam205a1D3YZF6 1314 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Thsd7aQ69ZU6 1645 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ttll6A4Q9E8 822 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 CenpaO35216 134 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 E2f6O54917 272 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Shoc2O88520 582 aaKnown RBP15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 NfiaQ02780 532 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Gmcl1Q920G9 524 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Nmd3Q99L48 503 aaKnown RBP15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Pdpk1Q9Z2A0 559 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Taf4E9QAP7 1042 aaKnown RBP15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Rnf216P58283 853 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Sash1P59808 1230 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Glt6d1Q2NKH9 311 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Nt5dc3Q3UHB1 546 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Msantd2Q6NZR2 559 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Hdac7Q8C2B3 938 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Lrif1Q8CDD9 755 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Wrap53Q8VC51 532 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Alg9Q8VDI9 611 aa15.81■□□□□ 0.12
Usp4-201ENSMUST00000035237 Znf536Q8K083 1302 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Gm16430A6X8J1 155 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Klf6O08584 283 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 UncxO08934 530 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Aoc3O70423 765 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Usp10P52479 792 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Psmc1P62192 440 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Sox10Q04888 466 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Mif4gdQ3UBZ5 222 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Xpnpep1Q6P1B1 623 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Catsper3Q80W99 395 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Slitrk1Q810C1 696 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Svs3bQ8BZH8 265 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Stoml1Q8CI66 399 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 ItpkaQ8R071 459 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Sumf1Q8R0F3 372 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ddx39aQ8VDW0 427 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Pacsin3Q99JB8 424 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Slxl1Q9D515 155 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ubiad1Q9DC60 336 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Mettl1Q9Z120 268 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Arhgef10lA2AWP8 1280 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Pcdh9F8VPK8 1237 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 PdgfraP26618 1089 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tnni3P48787 211 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ugt3a1Q3UP75 523 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Bnip1Q6QD59 228 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Polr2bQ8CFI7 1174 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Pglyrp2Q8VCS0 530 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Olfr1499Q8VG65 314 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Polr3fQ921X6 316 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Zbed3Q9D0L1 228 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tm9sf1Q9DBU0 606 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Cyp2t4E9PWV0 503 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 1700024B05RikE9Q6D7 167 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Gm4841E9QAA8 417 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 EsrraO08580 422 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ptpn20O55082 426 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 UgcgO88693 394 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Msx2Q03358 267 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Lrch2Q3UMG5 773 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Usp6nlQ80XC3 819 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ipo5Q8BKC5 1097 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Clic5Q8BXK9 251 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Dhx36Q8VHK9 1001 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Mtif2Q91YJ5 727 aaKnown RBP15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tssk3Q9D2E1 268 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Ndufa13Q9ERS2 144 aa15.8■□□□□ 0.12
Usp4-201ENSMUST00000035237 Heg1E9Q7X6 1337 aa15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 Nup98Q6PFD9 1816 aaKnown RBP15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 Srrm1Q52KI8 946 aaKnown RBP15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 Tpp2Q64514 1262 aa15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 B3glctQ8BHT6 489 aa15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 Olfr449Q8VGW8 311 aa15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 XdhQ00519 1335 aa15.79■□□□□ 0.12
Usp4-201ENSMUST00000035237 Zscan4-ps1A0A1C7CYV3 506 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms