Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm25239-201ENSMUST00000174915 86 ntBASIC43.06■■■■■ 4.48
Ddx39aQ8VDW0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
Ddx39aQ8VDW0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Ddx39aQ8VDW0 Gm15042-201ENSMUST00000120212 883 ntBASIC37.64■■■■□ 3.62
Ddx39aQ8VDW0 Gm24109-201ENSMUST00000175489 103 ntBASIC37.29■■■■□ 3.56
Ddx39aQ8VDW0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Ddx39aQ8VDW0 Gm15045-201ENSMUST00000117359 883 ntBASIC36.8■■■■□ 3.48
Ddx39aQ8VDW0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Ddx39aQ8VDW0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Ddx39aQ8VDW0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Ddx39aQ8VDW0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Ddx39aQ8VDW0 Gm23366-201ENSMUST00000175022 89 ntBASIC35.96■■■■□ 3.35
Ddx39aQ8VDW0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
Ddx39aQ8VDW0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Ddx39aQ8VDW0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ddx39aQ8VDW0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ddx39aQ8VDW0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.86■■■■□ 3.17
Ddx39aQ8VDW0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.81■■■■□ 3.16
Ddx39aQ8VDW0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ddx39aQ8VDW0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Ddx39aQ8VDW0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Ddx39aQ8VDW0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.59■■■■□ 3.13
Ddx39aQ8VDW0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
Ddx39aQ8VDW0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ddx39aQ8VDW0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ddx39aQ8VDW0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ddx39aQ8VDW0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ddx39aQ8VDW0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ddx39aQ8VDW0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.06
Ddx39aQ8VDW0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ddx39aQ8VDW0 Psd-208ENSMUST00000224556 2034 ntBASIC34.1■■■■□ 3.05
Ddx39aQ8VDW0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.07■■■■□ 3.04
Ddx39aQ8VDW0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Ddx39aQ8VDW0 Gm25238-201ENSMUST00000174914 89 ntBASIC33.98■■■■□ 3.03
Ddx39aQ8VDW0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.93■■■■□ 3.02
Ddx39aQ8VDW0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ddx39aQ8VDW0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ddx39aQ8VDW0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.47■■■□□ 2.95
Ddx39aQ8VDW0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.27■■■□□ 2.92
Ddx39aQ8VDW0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ddx39aQ8VDW0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ddx39aQ8VDW0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ddx39aQ8VDW0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.15■■■□□ 2.9
Ddx39aQ8VDW0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ddx39aQ8VDW0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ddx39aQ8VDW0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ddx39aQ8VDW0 Gm27325-201ENSMUST00000175467 74 ntBASIC32.96■■■□□ 2.87
Ddx39aQ8VDW0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.86■■■□□ 2.85
Ddx39aQ8VDW0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.83■■■□□ 2.85
Ddx39aQ8VDW0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx39aQ8VDW0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
Ddx39aQ8VDW0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.75■■■□□ 2.83
Ddx39aQ8VDW0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx39aQ8VDW0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.66■■■□□ 2.82
Ddx39aQ8VDW0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ddx39aQ8VDW0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.55■■■□□ 2.8
Ddx39aQ8VDW0 Gm25262-201ENSMUST00000174934 133 ntBASIC32.53■■■□□ 2.8
Ddx39aQ8VDW0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ddx39aQ8VDW0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ddx39aQ8VDW0 Rab21-202ENSMUST00000218831 843 ntBASIC32.36■■■□□ 2.77
Ddx39aQ8VDW0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ddx39aQ8VDW0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.27■■■□□ 2.76
Ddx39aQ8VDW0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ddx39aQ8VDW0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.23■■■□□ 2.75
Ddx39aQ8VDW0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ddx39aQ8VDW0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ddx39aQ8VDW0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ddx39aQ8VDW0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ddx39aQ8VDW0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Ddx39aQ8VDW0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.02■■■□□ 2.72
Ddx39aQ8VDW0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ddx39aQ8VDW0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ddx39aQ8VDW0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Ddx39aQ8VDW0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.96■■■□□ 2.71
Ddx39aQ8VDW0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.95■■■□□ 2.71
Ddx39aQ8VDW0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ddx39aQ8VDW0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.94■■■□□ 2.7
Ddx39aQ8VDW0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.93■■■□□ 2.7
Ddx39aQ8VDW0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ddx39aQ8VDW0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ddx39aQ8VDW0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Ddx39aQ8VDW0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ddx39aQ8VDW0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ddx39aQ8VDW0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ddx39aQ8VDW0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ddx39aQ8VDW0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ddx39aQ8VDW0 Gm26115-201ENSMUST00000175605 87 ntBASIC31.71■■■□□ 2.67
Ddx39aQ8VDW0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.68■■■□□ 2.66
Ddx39aQ8VDW0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ddx39aQ8VDW0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ddx39aQ8VDW0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.64■■■□□ 2.66
Ddx39aQ8VDW0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.63■■■□□ 2.65
Ddx39aQ8VDW0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Gm8109-201ENSMUST00000194076 746 ntBASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ddx39aQ8VDW0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ddx39aQ8VDW0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ddx39aQ8VDW0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.5■■■□□ 2.63
Ddx39aQ8VDW0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms