Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gm25239-201ENSMUST00000174915 86 ntBASIC37.81■■■■□ 3.64
Shoc2O88520 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Shoc2O88520 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Shoc2O88520 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Shoc2O88520 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Shoc2O88520 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.27■■■■□ 3.08
Shoc2O88520 Gm15042-201ENSMUST00000120212 883 ntBASIC33.36■■■□□ 2.93
Shoc2O88520 Psd-208ENSMUST00000224556 2034 ntBASIC33.16■■■□□ 2.9
Shoc2O88520 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Shoc2O88520 Gm15045-201ENSMUST00000117359 883 ntBASIC32.68■■■□□ 2.82
Shoc2O88520 Gm24109-201ENSMUST00000175489 103 ntBASIC32.6■■■□□ 2.81
Shoc2O88520 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Shoc2O88520 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shoc2O88520 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Shoc2O88520 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Shoc2O88520 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Shoc2O88520 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shoc2O88520 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.83■■■□□ 2.69
Shoc2O88520 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Shoc2O88520 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shoc2O88520 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shoc2O88520 Gm23366-201ENSMUST00000175022 89 ntBASIC31.6■■■□□ 2.65
Shoc2O88520 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Shoc2O88520 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Shoc2O88520 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Shoc2O88520 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shoc2O88520 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Shoc2O88520 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Shoc2O88520 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shoc2O88520 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Shoc2O88520 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Shoc2O88520 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Shoc2O88520 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Shoc2O88520 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.92■■■□□ 2.54
Shoc2O88520 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Shoc2O88520 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Shoc2O88520 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shoc2O88520 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.71■■■□□ 2.51
Shoc2O88520 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Shoc2O88520 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.65■■■□□ 2.5
Shoc2O88520 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Shoc2O88520 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Shoc2O88520 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Shoc2O88520 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Shoc2O88520 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.37■■■□□ 2.45
Shoc2O88520 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.19■■■□□ 2.42
Shoc2O88520 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.19■■■□□ 2.42
Shoc2O88520 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.18■■■□□ 2.42
Shoc2O88520 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Shoc2O88520 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shoc2O88520 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Shoc2O88520 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.89■■■□□ 2.38
Shoc2O88520 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Shoc2O88520 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shoc2O88520 Gm25238-201ENSMUST00000174914 89 ntBASIC29.74■■■□□ 2.35
Shoc2O88520 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shoc2O88520 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shoc2O88520 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.64■■■□□ 2.34
Shoc2O88520 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.61■■■□□ 2.33
Shoc2O88520 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Shoc2O88520 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Shoc2O88520 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Shoc2O88520 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shoc2O88520 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Shoc2O88520 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.41■■■□□ 2.3
Shoc2O88520 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Shoc2O88520 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.36■■■□□ 2.29
Shoc2O88520 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shoc2O88520 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
Shoc2O88520 Gm27325-201ENSMUST00000175467 74 ntBASIC29.28■■■□□ 2.28
Shoc2O88520 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Shoc2O88520 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.23■■■□□ 2.27
Shoc2O88520 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Shoc2O88520 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shoc2O88520 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Shoc2O88520 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Shoc2O88520 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shoc2O88520 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Shoc2O88520 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
Shoc2O88520 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.13■■■□□ 2.25
Shoc2O88520 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Shoc2O88520 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
Shoc2O88520 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Shoc2O88520 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Shoc2O88520 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Shoc2O88520 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Shoc2O88520 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Shoc2O88520 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Shoc2O88520 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Shoc2O88520 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Shoc2O88520 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Shoc2O88520 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.83■■■□□ 2.21
Shoc2O88520 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.82■■■□□ 2.2
Shoc2O88520 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Shoc2O88520 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shoc2O88520 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shoc2O88520 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
Shoc2O88520 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.59■■■□□ 2.17
Shoc2O88520 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shoc2O88520 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms