RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G RPS18AP0CX55 146 aaKnown RBP1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G RPS18BP0CX56 146 aaPredicted RBP1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G RNP1P32385 249 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G NPL6P32832 435 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G PPQ1P32945 549 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G CSH1P38287 376 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G AIM19P40502 157 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G NIF3P53081 288 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G VHT1P53241 593 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G HST4P53688 370 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G FRQ1Q06389 190 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G NGL1Q08213 363 aaKnown RBP1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G AYT1Q12226 474 aa1.88□□□□□ -2.11
tC(GCA)GtC(GCA)G PIS1P06197 220 aaKnown RBP1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G AHC2P25649 128 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G TIR2P33890 251 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G DIM1P41819 318 aaKnown RBP1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G ASI2P53895 289 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G TMA23Q03525 211 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G YMR253CQ04835 414 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G DCS1Q06151 350 aa1.87□□□□□ -2.11
tC(GCA)GtC(GCA)G YEL009C-AA0A023PZF2 135 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G YMR316C-AI2HB70 103 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G HIS3P06633 220 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G ARO2P28777 376 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G HOM6P31116 359 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G VMA8P32610 256 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G RPL32P38061 130 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G LSM2P38203 95 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G ATG27P46989 271 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G MGA1P53050 456 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G SDH7Q04401 133 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G YMR320WQ04897 101 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G YLR042CQ07990 161 aa1.86□□□□□ -2.11
tC(GCA)GtC(GCA)G CDC31P06704 161 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G DFR1P07807 211 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
tC(GCA)GtC(GCA)G CDC34P14682 295 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G EMP24P32803 203 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G SHB17P36136 271 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G NVJ1P38881 321 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G BFR1P38934 470 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
tC(GCA)GtC(GCA)G YAE1P47118 141 aaPredicted RBP1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G SDS23P53172 527 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G ODC1Q03028 310 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G TLG1Q03322 224 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G PAM18Q07914 168 aa1.85□□□□□ -2.11
tC(GCA)GtC(GCA)G VAR1P02381 398 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G FMT1P32785 401 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G MRPL28P36527 147 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G SFT2P38166 215 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G HTD2P38790 280 aaKnown RBP1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G HCH1P53834 153 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G SNA2P56508 79 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G RAV2Q03956 351 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G UPS3Q04006 179 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G IES3Q12345 250 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G TRM10Q12400 293 aa1.84□□□□□ -2.11
tC(GCA)GtC(GCA)G MDH1P17505 334 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
tC(GCA)GtC(GCA)G CDC10P25342 322 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G RPL16BP26785 198 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G RPL14AP36105 138 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G YBR013CP38215 129 aa1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G RPL14BP38754 138 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G YJR096WP47137 282 aa1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR031WQ07978 186 aa1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G YPR145C-AQ2V2P0 78 aa1.83□□□□□ -2.12
tC(GCA)GtC(GCA)G MBB1P39534 108 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G PEX22P39718 180 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G YER076CP40049 302 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G MSS2P40990 351 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G RPL37BP51402 88 aaKnown RBP1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G CAF40P53829 373 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G ATG41Q12048 136 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G ISN1Q99312 450 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G PET20Q99373 253 aa1.82□□□□□ -2.12
tC(GCA)GtC(GCA)G FCY2P17064 533 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G FAR1P21268 830 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G POP8P38208 133 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G TY1A-MR1Q04215 440 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR194CQ05777 254 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G SYM1Q06563 197 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G DGA1Q08650 418 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G SCP1Q08873 200 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G KTI11Q3E840 82 aa1.81□□□□□ -2.12
tC(GCA)GtC(GCA)G QCR7P00128 127 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G RPL16AP26784 199 aaKnown RBP1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G FPR2P32472 135 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G YCH1P42937 148 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G BNA6P43619 295 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G TPN1P53099 579 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G ORM1P53224 222 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G ISU1Q03020 165 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G MAK3Q03503 176 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR224WQ05947 369 aa1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G YOR283WQ12040 230 aaKnown RBP1.8□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR156WP0CE96 114 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR159WP0CE97 114 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR161WP0CE98 114 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G DDI2P0CH63 225 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G DDI3P0CH64 225 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 140.4 ms