RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeastyeast

Gene IRC16, Length 360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC16YPR038W RAD6P06104 172 aa0.3□□□□□ -2.36
IRC16YPR038W RPS25BP0C0T4 108 aaKnown RBP0.3□□□□□ -2.36
IRC16YPR038W SHG1P38337 142 aa0.3□□□□□ -2.36
IRC16YPR038W YGR269WP40326 108 aa0.3□□□□□ -2.36
IRC16YPR038W NQM1P53228 333 aaPredicted RBP0.3□□□□□ -2.36
IRC16YPR038W CWC21Q03375 135 aaKnown RBP0.3□□□□□ -2.36
IRC16YPR038W GPI17Q04080 534 aa0.3□□□□□ -2.36
IRC16YPR038W AVO2Q04749 426 aa0.3□□□□□ -2.36
IRC16YPR038W HRD1Q08109 551 aa0.3□□□□□ -2.36
IRC16YPR038W RPS25AQ3E792 108 aaPredicted RBP0.3□□□□□ -2.36
IRC16YPR038W YEL073CP39974 107 aa0.29□□□□□ -2.36
IRC16YPR038W GLR1P41921 483 aaKnown RBP0.29□□□□□ -2.36
IRC16YPR038W XPT1P47165 209 aa0.29□□□□□ -2.36
IRC16YPR038W HPT1Q04178 221 aaKnown RBP0.29□□□□□ -2.36
IRC16YPR038W BRX1Q08235 291 aaKnown RBP0.29□□□□□ -2.36
IRC16YPR038W VAM10Q08474 114 aa0.29□□□□□ -2.36
IRC16YPR038W YOR072WQ08486 104 aa0.29□□□□□ -2.36
IRC16YPR038W NUF2P33895 451 aa0.28□□□□□ -2.36
IRC16YPR038W TTI2P47168 421 aa0.28□□□□□ -2.36
IRC16YPR038W GEP7P53171 287 aa0.28□□□□□ -2.36
IRC16YPR038W GRX8Q05926 109 aa0.28□□□□□ -2.36
IRC16YPR038W YET3Q07451 203 aa0.28□□□□□ -2.36
IRC16YPR038W SPS2P08459 502 aa0.27□□□□□ -2.37
IRC16YPR038W HOP2P53187 214 aa0.27□□□□□ -2.37
IRC16YPR038W JAC1P53193 184 aa0.27□□□□□ -2.37
IRC16YPR038W PTC1P35182 281 aa0.26□□□□□ -2.37
IRC16YPR038W NVJ1P38881 321 aa0.26□□□□□ -2.37
IRC16YPR038W PLP1Q04004 230 aa0.26□□□□□ -2.37
IRC16YPR038W TAF2P23255 1407 aa0.26□□□□□ -2.37
IRC16YPR038W TRM3Q07527 1436 aa0.26□□□□□ -2.37
IRC16YPR038W CPR5P35176 225 aa0.25□□□□□ -2.37
IRC16YPR038W GLC8P41818 229 aa0.25□□□□□ -2.37
IRC16YPR038W CCC1P47818 322 aa0.25□□□□□ -2.37
IRC16YPR038W CDC39P25655 2108 aaKnown RBP0.25□□□□□ -2.37
IRC16YPR038W ROM2P51862 1356 aaKnown RBP0.24□□□□□ -2.37
IRC16YPR038W HAP2P06774 265 aa0.24□□□□□ -2.37
IRC16YPR038W RPS22AP0C0W1 130 aaKnown RBP0.24□□□□□ -2.37
IRC16YPR038W YBR027CP38220 110 aa0.24□□□□□ -2.37
IRC16YPR038W YNL122CP53921 115 aaPredicted RBP0.24□□□□□ -2.37
IRC16YPR038W LIP1Q03579 150 aa0.24□□□□□ -2.37
IRC16YPR038W SYM1Q06563 197 aa0.24□□□□□ -2.37
IRC16YPR038W UIP4Q08926 304 aa0.24□□□□□ -2.37
IRC16YPR038W RPS22BQ3E7Y3 130 aaKnown RBP0.24□□□□□ -2.37
IRC16YPR038W UBC6P33296 250 aaPredicted RBP0.23□□□□□ -2.37
IRC16YPR038W YMR141CP40211 102 aa0.23□□□□□ -2.37
IRC16YPR038W MGR2Q02889 113 aa0.23□□□□□ -2.37
IRC16YPR038W RPL43AP0CX25 92 aaKnown RBP0.22□□□□□ -2.37
IRC16YPR038W RPL43BP0CX26 92 aa0.22□□□□□ -2.37
IRC16YPR038W INO4P13902 151 aa0.22□□□□□ -2.37
IRC16YPR038W SPT14P32363 452 aa0.22□□□□□ -2.37
IRC16YPR038W SRP102P36057 244 aaPredicted RBP0.22□□□□□ -2.37
IRC16YPR038W YKR041WP36134 250 aa0.22□□□□□ -2.37
IRC16YPR038W ECM31P38122 312 aa0.22□□□□□ -2.37
IRC16YPR038W SNO1Q03144 224 aa0.22□□□□□ -2.37
IRC16YPR038W ATG10Q07879 167 aa0.22□□□□□ -2.37
IRC16YPR038W HYP2P23301 157 aaKnown RBP0.21□□□□□ -2.38
IRC16YPR038W CSH1P38287 376 aa0.21□□□□□ -2.38
IRC16YPR038W YEL028WP39989 153 aa0.21□□□□□ -2.38
IRC16YPR038W PEX11Q12462 236 aa0.21□□□□□ -2.38
IRC16YPR038W TRR1P29509 319 aaKnown RBP0.2□□□□□ -2.38
IRC16YPR038W ATP7P30902 174 aa0.2□□□□□ -2.38
IRC16YPR038W YEL014CP39999 101 aa0.2□□□□□ -2.38
IRC16YPR038W SOL1P50278 321 aa0.2□□□□□ -2.38
IRC16YPR038W YPT31P38555 223 aaKnown RBP0.19□□□□□ -2.38
IRC16YPR038W YLR307C-AQ3E825 87 aa0.19□□□□□ -2.38
IRC16YPR038W ATG8P38182 117 aaRIP-Chip data0.18□□□□□ -2.38not detected
IRC16YPR038W YLR050CQ12155 161 aaKnown RBP0.18□□□□□ -2.38
IRC16YPR038W CMD1P06787 147 aaKnown RBP0.17□□□□□ -2.38
IRC16YPR038W HTD2P38790 280 aaKnown RBP0.17□□□□□ -2.38
IRC16YPR038W YHR140WP38842 239 aa0.17□□□□□ -2.38
IRC16YPR038W YJL009WP47078 108 aa0.17□□□□□ -2.38
IRC16YPR038W YNL140CP53910 189 aa0.17□□□□□ -2.38
IRC16YPR038W TMA20P89886 181 aaPredicted RBP0.17□□□□□ -2.38
IRC16YPR038W SEN15Q04675 128 aa0.17□□□□□ -2.38
IRC16YPR038W IRC21Q04772 201 aa0.17□□□□□ -2.38
IRC16YPR038W YPR114WQ06107 315 aa0.17□□□□□ -2.38
IRC16YPR038W NMA1Q06178 401 aaKnown RBP0.17□□□□□ -2.38
IRC16YPR038W YDL241WQ07738 123 aa0.17□□□□□ -2.38
IRC16YPR038W ADE6P38972 1358 aaKnown RBP0.17□□□□□ -2.38
IRC16YPR038W YGL041W-AP0C5N3 154 aa0.16□□□□□ -2.38
IRC16YPR038W SEC72P39742 193 aaKnown RBP0.16□□□□□ -2.38
IRC16YPR038W YNR064CP53750 290 aa0.16□□□□□ -2.38
IRC16YPR038W THI74Q04083 370 aa0.16□□□□□ -2.38
IRC16YPR038W CMC4Q3E7A9 73 aa0.16□□□□□ -2.38
IRC16YPR038W RIB3Q99258 208 aa0.16□□□□□ -2.38
IRC16YPR038W YLR157W-EP0CF00 54 aa0.15□□□□□ -2.39
IRC16YPR038W APA2P22108 325 aa0.15□□□□□ -2.39
IRC16YPR038W HSP150P32478 413 aa0.15□□□□□ -2.39
IRC16YPR038W YDR102CQ03864 110 aa0.15□□□□□ -2.39
IRC16YPR038W LAA1P39526 2014 aa0.14□□□□□ -2.39
IRC16YPR038W RAD51P25454 400 aa0.14□□□□□ -2.39
IRC16YPR038W SRL3P36167 246 aa0.14□□□□□ -2.39
IRC16YPR038W GIM3P53900 129 aa0.14□□□□□ -2.39
IRC16YPR038W ATP19P81451 68 aa0.14□□□□□ -2.39
IRC16YPR038W FMN1Q03778 218 aa0.14□□□□□ -2.39
IRC16YPR038W COA6Q3E846 104 aa0.14□□□□□ -2.39
IRC16YPR038W RPL33AP05744 107 aaKnown RBP0.13□□□□□ -2.39
IRC16YPR038W VMA10P48836 114 aaKnown RBP0.13□□□□□ -2.39
IRC16YPR038W RCF2P53721 224 aa0.13□□□□□ -2.39
IRC16YPR038W BLM10P43583 2143 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms