RNA–Protein interactions for RNA: YPL163C

SVS1, Transcript of Cell wall and vacuolar protein, yeast

Gene SVS1, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SVS1	YPL163C	PAN3	P36102	679 aa	Predicted RBP	0.57	□□□□□ -2.32
SVS1	YPL163C	HMF1	P40037	129 aa	Known RBP	0.57	□□□□□ -2.32
SVS1	YPL163C	OTU1	P43558	301 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	GET1	P53192	235 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	YLR460C	P54007	376 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	DAD4	P69851	72 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	DIG2	Q03373	323 aa	Known RBP	0.57	□□□□□ -2.32
SVS1	YPL163C	FIT2	Q08906	153 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	COA3	Q3E7B2	85 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	NHP6B	P11633	99 aa	Known RBP	0.56	□□□□□ -2.32
SVS1	YPL163C	ECM4	P36156	370 aa		0.56	□□□□□ -2.32
SVS1	YPL163C	CWC23	P52868	283 aa	Predicted RBP	0.56	□□□□□ -2.32
SVS1	YPL163C	RNH202	Q05635	350 aa		0.56	□□□□□ -2.32
SVS1	YPL163C	IRC23	Q08416	157 aa		0.56	□□□□□ -2.32
SVS1	YPL163C	MDM32	Q12171	622 aa		0.56	□□□□□ -2.32
SVS1	YPL163C	COX8	P04039	78 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	CDC36	P06100	191 aa	Predicted RBP	0.55	□□□□□ -2.32
SVS1	YPL163C	HAP2	P06774	265 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	STP22	P25604	385 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	RME1	P32338	300 aa	Known RBP	0.55	□□□□□ -2.32
SVS1	YPL163C	RPB7	P34087	171 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	TRM5	P38793	499 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	RPS29A	P41057	56 aa	Known RBP	0.55	□□□□□ -2.32
SVS1	YPL163C	RAD17	P48581	401 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	GGA1	Q06336	557 aa		0.55	□□□□□ -2.32
SVS1	YPL163C	PRP11	Q07350	266 aa	Predicted RBP	0.55	□□□□□ -2.32
SVS1	YPL163C	FAS1	P07149	2051 aa	Known RBP	0.55	□□□□□ -2.32
SVS1	YPL163C	CDC33	P07260	213 aa	Known RBP	0.54	□□□□□ -2.32
SVS1	YPL163C	STE18	P18852	110 aa		0.54	□□□□□ -2.32
SVS1	YPL163C	YCR090C	P25654	182 aa	Known RBP	0.54	□□□□□ -2.32
SVS1	YPL163C	PRP18	P33411	251 aa	Predicted RBP	0.54	□□□□□ -2.32
SVS1	YPL163C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
SVS1	YPL163C	YEA4	P40004	342 aa		0.54	□□□□□ -2.32
SVS1	YPL163C	AIM25	P47140	327 aa		0.54	□□□□□ -2.32
SVS1	YPL163C	YGR035W-A	Q45U48	73 aa		0.54	□□□□□ -2.32
SVS1	YPL163C	PHO85	P17157	305 aa		0.53	□□□□□ -2.32
SVS1	YPL163C	YCR087C-A	P37263	153 aa		0.53	□□□□□ -2.32
SVS1	YPL163C	NCB2	Q92317	146 aa		0.53	□□□□□ -2.32
SVS1	YPL163C	COQ1	P18900	473 aa		0.52	□□□□□ -2.33
SVS1	YPL163C	UBC12	P52491	188 aa		0.52	□□□□□ -2.33
SVS1	YPL163C	THG1	P53215	237 aa	Known RBP	0.52	□□□□□ -2.33
SVS1	YPL163C	YMR099C	Q03161	297 aa	Known RBP	0.52	□□□□□ -2.33
SVS1	YPL163C	UPS3	Q04006	179 aa		0.52	□□□□□ -2.33
SVS1	YPL163C	YPR013C	Q12145	317 aa		0.52	□□□□□ -2.33
SVS1	YPL163C	YAR023C	D6VPM8	179 aa		0.51	□□□□□ -2.33
SVS1	YPL163C	CNB1	P25296	175 aa		0.51	□□□□□ -2.33
SVS1	YPL163C	SER2	P42941	309 aa		0.51	□□□□□ -2.33
SVS1	YPL163C	YDR391C	Q04170	232 aa		0.51	□□□□□ -2.33
SVS1	YPL163C	MRPL15	P36523	253 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	YER134C	P40081	178 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	MSS2	P40990	351 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	YMR295C	Q03559	197 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	BNA7	Q04066	261 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	DYN3	Q04949	312 aa		0.5	□□□□□ -2.33
SVS1	YPL163C	SEN2	P16658	377 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	YPK2	P18961	677 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	UGX2	P32772	223 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	PAM17	P36147	197 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	IKI1	P38874	309 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	SKI6	P46948	246 aa	Predicted RBP	0.49	□□□□□ -2.33
SVS1	YPL163C	FMN1	Q03778	218 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	YLR036C	Q07986	203 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	YPR203W	Q08994	102 aa		0.49	□□□□□ -2.33
SVS1	YPL163C	MLP1	Q02455	1875 aa	Known RBP	0.49	□□□□□ -2.33
SVS1	YPL163C	MBF1	O14467	151 aa	Known RBP	0.48	□□□□□ -2.33
SVS1	YPL163C	ARG80	P07249	177 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	RFA3	P26755	122 aa	Known RBP	0.48	□□□□□ -2.33
SVS1	YPL163C	ARO7	P32178	256 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	AUA1	P32450	94 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	AIM2	P39721	246 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	ALB1	P47019	175 aa	Predicted RBP	0.48	□□□□□ -2.33
SVS1	YPL163C	ARP3	P47117	449 aa	Known RBP	0.48	□□□□□ -2.33
SVS1	YPL163C	YNL033W	P53964	284 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	MET31	Q03081	177 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	YOL014W	Q08110	124 aa		0.48	□□□□□ -2.33
SVS1	YPL163C	UBR1	P19812	1950 aa		0.47	□□□□□ -2.33
SVS1	YPL163C	UBC8	P28263	218 aa		0.47	□□□□□ -2.33
SVS1	YPL163C	SFK1	P35735	353 aa		0.47	□□□□□ -2.33
SVS1	YPL163C	SHH3	Q04487	196 aa		0.47	□□□□□ -2.33
SVS1	YPL163C	FUS2	Q05670	677 aa		0.47	□□□□□ -2.33
SVS1	YPL163C	MGT1	P26188	188 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	YBR242W	P38331	238 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	YHL037C	P38733	133 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	MTW1	P39731	289 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	YMR226C	Q05016	267 aa	Known RBP	0.46	□□□□□ -2.34
SVS1	YPL163C	NAT3	Q06504	195 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	TAR1	Q8TGM6	124 aa		0.46	□□□□□ -2.34
SVS1	YPL163C	TIR1	P10863	254 aa		0.45	□□□□□ -2.34
SVS1	YPL163C	GSP2	P32836	220 aa	Known RBP	0.45	□□□□□ -2.34
SVS1	YPL163C	YJR111C	P47148	283 aa	Known RBP	0.45	□□□□□ -2.34
SVS1	YPL163C	NOP19	P53317	196 aa	Predicted RBP	0.45	□□□□□ -2.34
SVS1	YPL163C	YMR253C	Q04835	414 aa		0.45	□□□□□ -2.34
SVS1	YPL163C	YML100W-A	Q8TGT0	57 aa		0.45	□□□□□ -2.34
SVS1	YPL163C	MRS1	P07266	363 aa		0.44	□□□□□ -2.34
SVS1	YPL163C	AHT1	P29589	182 aa		0.44	□□□□□ -2.34
SVS1	YPL163C	ASF2	P32448	525 aa	Predicted RBP	0.44	□□□□□ -2.34
SVS1	YPL163C	FIG1	P38224	298 aa		0.44	□□□□□ -2.34
SVS1	YPL163C	RFC4	P40339	323 aa	Known RBP	0.44	□□□□□ -2.34
SVS1	YPL163C	YFL051C	P43552	160 aa		0.44	□□□□□ -2.34
SVS1	YPL163C	PST2	Q12335	198 aa	Known RBP	0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms