RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	YOL131W	Q08270	108 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	YNR034W-A	Q3E841	98 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	MBF1	O14467	151 aa	Known RBP	4.16	□□□□□ -1.74
PXA1	YPL147W	KRE1	P17260	313 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	MIG1	P27705	504 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	YSC84	P32793	468 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	UBP8	P50102	471 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	LSM7	P53905	115 aa	Known RBP	4.16	□□□□□ -1.74
PXA1	YPL147W	SPG4	Q04438	115 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	VMA9	Q3E7B6	73 aa		4.16	□□□□□ -1.74
PXA1	YPL147W	ECM12	O13529	151 aa		4.15	□□□□□ -1.74
PXA1	YPL147W	GEP4	P38812	185 aa		4.15	□□□□□ -1.74
PXA1	YPL147W	SMD3	P43321	101 aa	Known RBP	4.15	□□□□□ -1.74
PXA1	YPL147W	YLR224W	Q05947	369 aa		4.15	□□□□□ -1.74
PXA1	YPL147W	YOL160W	Q08321	113 aa		4.15	□□□□□ -1.74
PXA1	YPL147W	SUS1	Q6WNK7	96 aa		4.15	□□□□□ -1.74
PXA1	YPL147W	INO4	P13902	151 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	SPO13	P23624	291 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	TOM40	P23644	387 aa	Known RBP	4.15	□□□□□ -1.75
PXA1	YPL147W	DFG10	P40526	253 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	YJL213W	P40896	331 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	YFL065C	P43539	102 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	THG1	P53215	237 aa	Known RBP	4.15	□□□□□ -1.75
PXA1	YPL147W	YPR203W	Q08994	102 aa		4.15	□□□□□ -1.75
PXA1	YPL147W	YPL245W	Q12179	454 aa	Known RBP	4.15	□□□□□ -1.75
PXA1	YPL147W	DFM1	Q12743	341 aa	Known RBP	4.15	□□□□□ -1.75
PXA1	YPL147W	CUP9	P41817	306 aa		4.14	□□□□□ -1.75
PXA1	YPL147W	YGL193C	P53097	103 aa		4.14	□□□□□ -1.75
PXA1	YPL147W	TEX1	P53851	422 aa	Known RBP	4.14	□□□□□ -1.75
PXA1	YPL147W	BUD25	P85052	153 aa		4.14	□□□□□ -1.75
PXA1	YPL147W	SNX3	Q08826	162 aa	Known RBP	4.14	□□□□□ -1.75
PXA1	YPL147W	MPD1	Q12404	318 aa	Known RBP	4.14	□□□□□ -1.75
PXA1	YPL147W	YIL134C-A	Q45U18	67 aa		4.14	□□□□□ -1.75
PXA1	YPL147W	HTL1	Q9URQ5	78 aa		4.14	□□□□□ -1.75
PXA1	YPL147W	ADH3	P07246	375 aa	Known RBP	4.14	□□□□□ -1.75
PXA1	YPL147W	RPA12	P32529	125 aa	Known RBP	4.14	□□□□□ -1.75
PXA1	YPL147W	CDC43	P18898	376 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	TRS20	P38334	175 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	GAT4	P40569	121 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	SYS1	P41544	203 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	ERG25	P53045	309 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	EMC4	P53073	190 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	YDL180W	Q12301	547 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	YBL112C	Q3E7Y4	105 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	DUR1,2	P32528	1835 aa	Known RBP	4.13	□□□□□ -1.75
PXA1	YPL147W	RPS31	P05759	152 aa	Known RBP	4.13	□□□□□ -1.75
PXA1	YPL147W	ATG8	P38182	117 aa	RIP-Chip data	4.13	□□□□□ -1.75	not detected
PXA1	YPL147W	MPC1	P53157	130 aa	Known RBP	4.13	□□□□□ -1.75
PXA1	YPL147W	YGR045C	P53229	120 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	YNL046W	P53956	172 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	YDR029W	Q12111	104 aa		4.13	□□□□□ -1.75
PXA1	YPL147W	POR1	P04840	283 aa	Known RBP	4.12	□□□□□ -1.75
PXA1	YPL147W	MRP21	P38175	177 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	FIP1	P45976	327 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	JJJ3	P47138	172 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	UBC13	P52490	153 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	YPR145C-A	Q2V2P0	78 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	YHR214C-E	Q8TGK0	99 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	AHT1	P29589	182 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	PAM17	P36147	197 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	YNL320W	P42840	284 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	TOS8	P53147	276 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	TIM18	Q08749	192 aa		4.12	□□□□□ -1.75
PXA1	YPL147W	PHO89	P38361	574 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	ATG18	P43601	500 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	YPL162C	Q12042	273 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	YOS1	Q3E834	85 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	FUN19	P28003	413 aa	Predicted RBP	4.11	□□□□□ -1.75
PXA1	YPL147W	ARN2	P38724	620 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	RAF1	Q06891	181 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	ECM29	P38737	1868 aa		4.11	□□□□□ -1.75
PXA1	YPL147W	YCR099C	P25657	155 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	NNK1	P36003	928 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	RPL14A	P36105	138 aa	Known RBP	4.1	□□□□□ -1.75
PXA1	YPL147W	TIM17	P39515	158 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	YAR029W	P39549	74 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	WWM1	P43582	211 aa	Known RBP	4.1	□□□□□ -1.75
PXA1	YPL147W	AIR2	Q12476	344 aa	Known RBP	4.1	□□□□□ -1.75
PXA1	YPL147W	MED11	Q99278	115 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	YMC2	P38087	329 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	SHE1	P38200	338 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	ANS1	P38832	159 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	SVP26	P38869	228 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	CCS1	P40202	249 aa	Known RBP	4.1	□□□□□ -1.75
PXA1	YPL147W	CYB5	P40312	120 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	PHS1	P40857	217 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	VHT1	P53241	593 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	FHN1	P53279	174 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	PET191	Q02772	108 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	KSH1	Q8TGJ3	72 aa		4.1	□□□□□ -1.75
PXA1	YPL147W	TRP1	P00912	224 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	SPS100	P13130	326 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	MRPL11	P36521	249 aa	Predicted RBP	4.09	□□□□□ -1.75
PXA1	YPL147W	CSH1	P38287	376 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	GGC1	P38988	300 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	CAX4	P53223	239 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	JID1	Q12350	301 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	Q0255	P03881	472 aa		4.09	□□□□□ -1.75
PXA1	YPL147W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PXA1	YPL147W	MRS4	P23500	304 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms