RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	TSA2	Q04120	196 aa		3.36	□□□□□ -1.87
YTM1	YOR272W	YPR114W	Q06107	315 aa		3.36	□□□□□ -1.87
YTM1	YOR272W	YPR174C	Q06616	221 aa	Predicted RBP	3.36	□□□□□ -1.87
YTM1	YOR272W	PRM3	Q08931	133 aa		3.36	□□□□□ -1.87
YTM1	YOR272W	YPL162C	Q12042	273 aa		3.36	□□□□□ -1.87
YTM1	YOR272W	ISD11	Q6Q560	94 aa		3.36	□□□□□ -1.87
YTM1	YOR272W	RPS14A	P06367	137 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	SEC4	P07560	215 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	YOL162W	P0CF19	215 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	RPL1A	P0CX43	217 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	RPL1B	P0CX44	217 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	MRS4	P23500	304 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	PPA2	P28239	310 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	MKK1	P32490	508 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	YBR292C	P38357	123 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	WSC4	P38739	605 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	RPS14B	P39516	138 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	COX15	P40086	486 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	SIM1	P40472	476 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	YCH1	P42937	148 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	COQ5	P49017	307 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	YGL230C	P53074	147 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	PDR16	P53860	351 aa	Known RBP	3.35	□□□□□ -1.87
YTM1	YOR272W	ECM18	Q04623	453 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	FSH2	Q05015	223 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	GRX8	Q05926	109 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	CDD1	Q06549	142 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	YOL024W	Q08172	172 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	GEP5	Q12393	293 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	ODC2	Q99297	307 aa		3.35	□□□□□ -1.87
YTM1	YOR272W	INO4	P13902	151 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.88	not detected
YTM1	YOR272W	ZRT1	P32804	376 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	TAE1	P38340	232 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	DOG2	P38773	246 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	YHR130C	P38834	111 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	OSW5	P40219	148 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	BAT2	P47176	376 aa	Known RBP	3.34	□□□□□ -1.88
YTM1	YOR272W	LST7	P53237	242 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	YPQ1	Q12010	308 aa		3.34	□□□□□ -1.88
YTM1	YOR272W	TOR1	P35169	2470 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU1	P0CE88	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU14	P0CE89	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU6	P0CE90	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU18	P0CE91	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU8	P0CE92	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU11	P0CE93	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	SEC11	P15367	167 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU13	P38725	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	MED6	P38782	295 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	YHR127W	P38833	243 aa	Known RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	BAT1	P38891	393 aa	Known RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	RPB11	P38902	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	TEM1	P38987	245 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	MSL1	P40567	111 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	HAC1	P41546	238 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	YFL065C	P43539	102 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	ERJ5	P43613	295 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	XPT1	P47165	209 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU4	P53427	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	DAD3	P69850	94 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	APS2	Q00381	147 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU10	Q03050	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	SPG3	Q04398	127 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	SDH7	Q04401	133 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	DPP1	Q05521	289 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PRP11	Q07350	266 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	LDS2	Q08218	356 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU20	Q08322	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	TMC1	Q08422	150 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	YPR203W	Q08994	102 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	MCP1	Q12106	302 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	SME1	Q12330	94 aa	Predicted RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	JID1	Q12350	301 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	YLR363W-A	Q3E747	85 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	PAU9	Q3E770	120 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	MSB2	P32334	1306 aa		3.33	□□□□□ -1.88
YTM1	YOR272W	BEM2	P39960	2167 aa	Known RBP	3.33	□□□□□ -1.88
YTM1	YOR272W	VAR1	P02381	398 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	DPM1	P14020	267 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	COX10	P21592	462 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	YGL010W	P25338	174 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	TRX3	P25372	127 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	RAD23	P32628	398 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	DAD2	P36162	133 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	FYV4	P38783	130 aa	Predicted RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	HIT1	P46973	164 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	YJR085C	P47131	105 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	SBH2	P52871	88 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	ALG9	P53868	555 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	YNL140C	P53910	189 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	SUR7	P54003	302 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	RPL21A	Q02753	160 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	YMR082C	Q04276	118 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	MCT1	Q12283	360 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	UTP23	Q12339	254 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	ATO3	Q12359	275 aa		3.32	□□□□□ -1.88
YTM1	YOR272W	RPL21B	Q12672	160 aa	Known RBP	3.32	□□□□□ -1.88
YTM1	YOR272W	STE7	P06784	515 aa		3.31	□□□□□ -1.88
YTM1	YOR272W	MSI1	P13712	422 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms