RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C RPL13BP40212 199 aaKnown RBP2.57□□□□□ -2
NFI1YOR156C RPL13AQ12690 199 aaPredicted RBP2.57□□□□□ -2
NFI1YOR156C RIO2P40160 425 aaKnown RBP2.57□□□□□ -2
NFI1YOR156C YPL073CP40323 161 aa2.57□□□□□ -2
NFI1YOR156C VPS71Q03433 280 aa2.57□□□□□ -2
NFI1YOR156C RNH202Q05635 350 aa2.57□□□□□ -2
NFI1YOR156C NUM1Q00402 2748 aa2.57□□□□□ -2
NFI1YOR156C RAD50P12753 1312 aa2.57□□□□□ -2
NFI1YOR156C YNL140CP53910 189 aa2.56□□□□□ -2
NFI1YOR156C YDL180WQ12301 547 aa2.56□□□□□ -2
NFI1YOR156C YLR412C-AQ3E742 68 aa2.56□□□□□ -2
NFI1YOR156C IDP1P21954 428 aaKnown RBP2.56□□□□□ -2
NFI1YOR156C SRP14P38985 146 aa2.56□□□□□ -2
NFI1YOR156C YPR174CQ06616 221 aaPredicted RBP2.56□□□□□ -2
NFI1YOR156C TRM3Q07527 1436 aa2.55□□□□□ -2
NFI1YOR156C PAM17P36147 197 aa2.55□□□□□ -2
NFI1YOR156C HPT1Q04178 221 aaKnown RBP2.55□□□□□ -2
NFI1YOR156C YOR342CQ12182 319 aa2.55□□□□□ -2
NFI1YOR156C DGK1Q12382 290 aa2.55□□□□□ -2
NFI1YOR156C NUF2P33895 451 aa2.54□□□□□ -2
NFI1YOR156C TVP38P36164 337 aa2.54□□□□□ -2
NFI1YOR156C CUP9P41817 306 aa2.54□□□□□ -2
NFI1YOR156C YMR253CQ04835 414 aa2.54□□□□□ -2
NFI1YOR156C GPA2P10823 449 aa2.53□□□□□ -2
NFI1YOR156C SEC14P24280 304 aaKnown RBP2.53□□□□□ -2
NFI1YOR156C SPC25P40014 221 aa2.53□□□□□ -2
NFI1YOR156C RFC2P40348 353 aa2.53□□□□□ -2
NFI1YOR156C DAD4P69851 72 aa2.53□□□□□ -2
NFI1YOR156C USO1P25386 1790 aa2.53□□□□□ -2
NFI1YOR156C BCK1Q01389 1478 aa2.53□□□□□ -2
NFI1YOR156C QCR8P08525 94 aa2.53□□□□□ -2
NFI1YOR156C NSP1P14907 823 aaKnown RBP2.53□□□□□ -2
NFI1YOR156C YNL033WP53964 284 aa2.53□□□□□ -2
NFI1YOR156C TY1B-NL2Q99337 1749 aaKnown RBP2.52□□□□□ -2.01
NFI1YOR156C ECM4P36156 370 aa2.52□□□□□ -2.01
NFI1YOR156C FYV12Q08559 129 aa2.52□□□□□ -2.01
NFI1YOR156C YLR050CQ12155 161 aaKnown RBP2.52□□□□□ -2.01
NFI1YOR156C FPR1P20081 114 aaKnown RBP2.51□□□□□ -2.01
NFI1YOR156C ARC19P33204 171 aaKnown RBP2.51□□□□□ -2.01
NFI1YOR156C SOL1P50278 321 aa2.51□□□□□ -2.01
NFI1YOR156C DIG2Q03373 323 aaKnown RBP2.51□□□□□ -2.01
NFI1YOR156C ATP20Q12233 115 aa2.51□□□□□ -2.01
NFI1YOR156C CMC2Q3E7A4 109 aa2.51□□□□□ -2.01
NFI1YOR156C DUR1,2P32528 1835 aaKnown RBP2.51□□□□□ -2.01
NFI1YOR156C FAS1P07149 2051 aaKnown RBP2.51□□□□□ -2.01
NFI1YOR156C APC1P53886 1748 aa2.51□□□□□ -2.01
NFI1YOR156C KRE5P22023 1365 aa2.51□□□□□ -2.01
NFI1YOR156C YHL018WP38744 120 aaPredicted RBP2.51□□□□□ -2.01
NFI1YOR156C YER121WP40076 114 aa2.51□□□□□ -2.01
NFI1YOR156C YPR013CQ12145 317 aa2.51□□□□□ -2.01
NFI1YOR156C RME1P32338 300 aaKnown RBP2.5□□□□□ -2.01
NFI1YOR156C YAP3P38749 330 aa2.5□□□□□ -2.01
NFI1YOR156C YHR007C-AQ07074 71 aa2.5□□□□□ -2.01
NFI1YOR156C PEX11Q12462 236 aa2.5□□□□□ -2.01
NFI1YOR156C MDM35O60200 86 aa2.5□□□□□ -2.01
NFI1YOR156C VPS51P36116 164 aa2.5□□□□□ -2.01
NFI1YOR156C THG1P53215 237 aaKnown RBP2.5□□□□□ -2.01
NFI1YOR156C PRP11Q07350 266 aaPredicted RBP2.5□□□□□ -2.01
NFI1YOR156C CPR5P35176 225 aa2.49□□□□□ -2.01
NFI1YOR156C YNL200CP40165 246 aaKnown RBP2.49□□□□□ -2.01
NFI1YOR156C TTI2P47168 421 aa2.49□□□□□ -2.01
NFI1YOR156C NSA2P40078 261 aaKnown RBP2.49□□□□□ -2.01
NFI1YOR156C SEN2P16658 377 aa2.48□□□□□ -2.01
NFI1YOR156C FLX1P40464 311 aa2.48□□□□□ -2.01
NFI1YOR156C CYR1P08678 2026 aaKnown RBP2.48□□□□□ -2.01
NFI1YOR156C COX8P04039 78 aa2.47□□□□□ -2.01
NFI1YOR156C FYV4P38783 130 aaPredicted RBP2.47□□□□□ -2.01
NFI1YOR156C ORM1P53224 222 aa2.47□□□□□ -2.01
NFI1YOR156C MPA43P53583 542 aaPredicted RBP2.47□□□□□ -2.01
NFI1YOR156C MZM1Q03429 123 aaPredicted RBP2.47□□□□□ -2.01
NFI1YOR156C HSK3P69852 69 aa2.47□□□□□ -2.01
NFI1YOR156C GAL83Q04739 417 aa2.47□□□□□ -2.01
NFI1YOR156C YPL225WQ08971 146 aaKnown RBP2.47□□□□□ -2.01
NFI1YOR156C DAS2Q12084 232 aa2.47□□□□□ -2.01
NFI1YOR156C ROM2P51862 1356 aaKnown RBP2.47□□□□□ -2.01
NFI1YOR156C ACP1P32463 125 aa2.46□□□□□ -2.02
NFI1YOR156C SBH1P52870 82 aa2.46□□□□□ -2.02
NFI1YOR156C YRF1-2P40105 1681 aa2.46□□□□□ -2.02
NFI1YOR156C SRL3P36167 246 aa2.46□□□□□ -2.02
NFI1YOR156C RRT1P38192 103 aa2.46□□□□□ -2.02
NFI1YOR156C YAE1P47118 141 aaPredicted RBP2.46□□□□□ -2.02
NFI1YOR156C EFM5P53200 248 aaKnown RBP2.46□□□□□ -2.02
NFI1YOR156C SMD2Q06217 110 aaKnown RBP2.46□□□□□ -2.02
NFI1YOR156C FIT2Q08906 153 aa2.46□□□□□ -2.02
NFI1YOR156C YNL146C-AQ3E7Z1 64 aa2.46□□□□□ -2.02
NFI1YOR156C RRP5Q05022 1729 aaKnown RBP2.45□□□□□ -2.02
NFI1YOR156C URB1P34241 1764 aaKnown RBP2.45□□□□□ -2.02
NFI1YOR156C HYR1P40581 163 aaKnown RBP2.45□□□□□ -2.02
NFI1YOR156C PHB1P40961 287 aa2.45□□□□□ -2.02
NFI1YOR156C PLP1Q04004 230 aa2.45□□□□□ -2.02
NFI1YOR156C MSB2P32334 1306 aa2.45□□□□□ -2.02
NFI1YOR156C STP22P25604 385 aa2.44□□□□□ -2.02
NFI1YOR156C PST2Q12335 198 aaKnown RBP2.44□□□□□ -2.02
NFI1YOR156C YKL068W-AQ3E826 78 aa2.44□□□□□ -2.02
NFI1YOR156C YBR242WP38331 238 aa2.44□□□□□ -2.02
NFI1YOR156C YOR214CQ12282 236 aa2.44□□□□□ -2.02
NFI1YOR156C GSP2P32836 220 aaKnown RBP2.43□□□□□ -2.02
NFI1YOR156C SFK1P35735 353 aa2.43□□□□□ -2.02
NFI1YOR156C UBC7Q02159 165 aa2.43□□□□□ -2.02
NFI1YOR156C FES1P38260 290 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms