RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RPS22BQ3E7Y3 130 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C YBL112CQ3E7Y4 105 aa3.51□□□□□ -1.85
VHS3YOR054C YPL229WQ99395 206 aa3.51□□□□□ -1.85
VHS3YOR054C SOD1P00445 154 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C MRS1P07266 363 aa3.51□□□□□ -1.85
VHS3YOR054C RPS22AP0C0W1 130 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C CPR2P23285 205 aa3.51□□□□□ -1.85
VHS3YOR054C DSS4P32601 143 aa3.51□□□□□ -1.85
VHS3YOR054C KKQ8P36004 724 aa3.51□□□□□ -1.85
VHS3YOR054C IML3P38265 245 aa3.51□□□□□ -1.85
VHS3YOR054C DER1P38307 211 aa3.51□□□□□ -1.85
VHS3YOR054C YJL213WP40896 331 aa3.51□□□□□ -1.85
VHS3YOR054C MIC27P50945 234 aa3.51□□□□□ -1.85
VHS3YOR054C YGL235WP53071 178 aa3.51□□□□□ -1.85
VHS3YOR054C PIR3Q03180 325 aa3.51□□□□□ -1.85
VHS3YOR054C POC4Q12245 148 aaPredicted RBP3.51□□□□□ -1.85
VHS3YOR054C SMT3Q12306 101 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C YDR157WA0A023PZE8 133 aa3.5□□□□□ -1.85
VHS3YOR054C TRM7P38238 310 aaKnown RBP3.5□□□□□ -1.85
VHS3YOR054C OM14P38325 134 aa3.5□□□□□ -1.85
VHS3YOR054C SRP14P38985 146 aa3.5□□□□□ -1.85
VHS3YOR054C YER085CP40058 173 aa3.5□□□□□ -1.85
VHS3YOR054C ATG21Q02887 496 aa3.5□□□□□ -1.85
VHS3YOR054C NUP53Q03790 475 aa3.5□□□□□ -1.85
VHS3YOR054C LIP2Q06005 328 aa3.5□□□□□ -1.85
VHS3YOR054C YPR064WQ12492 139 aa3.5□□□□□ -1.85
VHS3YOR054C ATG40Q99325 256 aa3.5□□□□□ -1.85
VHS3YOR054C MSB2P32334 1306 aa3.5□□□□□ -1.85
VHS3YOR054C RPS13P05756 151 aaKnown RBP3.49□□□□□ -1.85
VHS3YOR054C ERG2P32352 222 aa3.49□□□□□ -1.85
VHS3YOR054C YGP1P38616 354 aaKnown RBP3.49□□□□□ -1.85
VHS3YOR054C APQ12P40532 138 aa3.49□□□□□ -1.85
VHS3YOR054C SHR5P41912 237 aa3.49□□□□□ -1.85
VHS3YOR054C CRH1P53301 507 aa3.49□□□□□ -1.85
VHS3YOR054C YIP3P53633 176 aa3.49□□□□□ -1.85
VHS3YOR054C YPL039WQ03080 316 aa3.49□□□□□ -1.85
VHS3YOR054C VPS71Q03433 280 aa3.49□□□□□ -1.85
VHS3YOR054C JID1Q12350 301 aa3.49□□□□□ -1.85
VHS3YOR054C FMP27Q06179 2628 aa3.49□□□□□ -1.85
VHS3YOR054C YLL053CP0CD98 152 aa3.49□□□□□ -1.85
VHS3YOR054C CUP2P15315 225 aa3.49□□□□□ -1.85
VHS3YOR054C ERG8P24521 451 aa3.49□□□□□ -1.85
VHS3YOR054C TIM12P32830 109 aa3.49□□□□□ -1.85
VHS3YOR054C TIR2P33890 251 aa3.49□□□□□ -1.85
VHS3YOR054C MIC12P38341 106 aa3.49□□□□□ -1.85
VHS3YOR054C RPP1P38786 293 aa3.49□□□□□ -1.85
VHS3YOR054C ANS1P38832 159 aa3.49□□□□□ -1.85
VHS3YOR054C YER076CP40049 302 aa3.49□□□□□ -1.85
VHS3YOR054C ARP3P47117 449 aaKnown RBP3.49□□□□□ -1.85
VHS3YOR054C BRR6P53062 197 aa3.49□□□□□ -1.85
VHS3YOR054C OGG1P53397 376 aaPredicted RBP3.49□□□□□ -1.85
VHS3YOR054C SWT21P53873 357 aaPredicted RBP3.49□□□□□ -1.85
VHS3YOR054C BET5Q03630 159 aa3.49□□□□□ -1.85
VHS3YOR054C YLR012CQ07927 99 aa3.49□□□□□ -1.85
VHS3YOR054C DGA1Q08650 418 aa3.49□□□□□ -1.85
VHS3YOR054C PRP46Q12417 451 aaPredicted RBP3.49□□□□□ -1.85
VHS3YOR054C TAD3Q9URQ3 322 aa3.49□□□□□ -1.85
VHS3YOR054C RPL12AP0CX53 165 aaKnown RBP3.48□□□□□ -1.85
VHS3YOR054C RPL12BP0CX54 165 aa3.48□□□□□ -1.85
VHS3YOR054C HMRA1P0CY11 126 aa3.48□□□□□ -1.85
VHS3YOR054C CTA1P15202 515 aa3.48□□□□□ -1.85
VHS3YOR054C CMC1P36064 111 aa3.48□□□□□ -1.85
VHS3YOR054C GGC1P38988 300 aa3.48□□□□□ -1.85
VHS3YOR054C YAR068WP39564 161 aa3.48□□□□□ -1.85
VHS3YOR054C YNL200CP40165 246 aaKnown RBP3.48□□□□□ -1.85
VHS3YOR054C DFG10P40526 253 aa3.48□□□□□ -1.85
VHS3YOR054C TDA4P47153 279 aa3.48□□□□□ -1.85
VHS3YOR054C YIP5P53108 310 aa3.48□□□□□ -1.85
VHS3YOR054C YGL118CP53132 145 aa3.48□□□□□ -1.85
VHS3YOR054C YNR064CP53750 290 aa3.48□□□□□ -1.85
VHS3YOR054C HRT1Q08273 121 aa3.48□□□□□ -1.85
VHS3YOR054C TEL1P38110 2787 aa3.48□□□□□ -1.85
VHS3YOR054C YLR415CO13578 112 aa3.48□□□□□ -1.85
VHS3YOR054C QCR9P22289 66 aa3.48□□□□□ -1.85
VHS3YOR054C YIL163CP40448 117 aa3.48□□□□□ -1.85
VHS3YOR054C SAS2P40963 338 aa3.48□□□□□ -1.85
VHS3YOR054C CTK2P46962 323 aa3.48□□□□□ -1.85
VHS3YOR054C YJL118WP47022 219 aa3.48□□□□□ -1.85
VHS3YOR054C ERG13P54839 491 aaKnown RBP3.48□□□□□ -1.85
VHS3YOR054C YMR007WQ03675 126 aa3.48□□□□□ -1.85
VHS3YOR054C YLR296WQ05898 108 aa3.48□□□□□ -1.85
VHS3YOR054C PAM18Q07914 168 aa3.48□□□□□ -1.85
VHS3YOR054C CYC3P06182 269 aa3.47□□□□□ -1.85
VHS3YOR054C CPT1P17898 393 aa3.47□□□□□ -1.85
VHS3YOR054C STE18P18852 110 aa3.47□□□□□ -1.85
VHS3YOR054C MRPL20P22354 195 aaPredicted RBP3.47□□□□□ -1.85
VHS3YOR054C RFA3P26755 122 aaKnown RBP3.47□□□□□ -1.85
VHS3YOR054C ERV1P27882 189 aa3.47□□□□□ -1.85
VHS3YOR054C SRP21P32342 167 aa3.47□□□□□ -1.85
VHS3YOR054C GCS1P35197 352 aa3.47□□□□□ -1.85
VHS3YOR054C YBR090CP38253 122 aa3.47□□□□□ -1.85
VHS3YOR054C SNF11P38956 169 aa3.47□□□□□ -1.85
VHS3YOR054C YGR039WP53225 103 aa3.47□□□□□ -1.85
VHS3YOR054C YNR048WP53740 393 aa3.47□□□□□ -1.85
VHS3YOR054C POP3P53833 195 aaPredicted RBP3.47□□□□□ -1.85
VHS3YOR054C UBC7Q02159 165 aa3.47□□□□□ -1.85
VHS3YOR054C YHM2Q04013 314 aa3.47□□□□□ -1.85
VHS3YOR054C YTH1Q06102 208 aaPredicted RBP3.47□□□□□ -1.85
VHS3YOR054C YPL264CQ08980 353 aa3.47□□□□□ -1.85
VHS3YOR054C HEM4P06174 275 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms