RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	RPL9A	P05738	191 aa	Known RBP	2.62	□□□□□ -1.99
TOP1	YOL006C	SGA1	P08019	549 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	MRS4	P23500	304 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	MIG3	P39943	394 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	YEA6	P39953	335 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	ARC15	P40518	154 aa	RIP-Chip data	2.62	□□□□□ -1.99	not detected
TOP1	YOL006C	PHS1	P40857	217 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	GON7	P46984	123 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	RPL9B	P51401	191 aa	Known RBP	2.62	□□□□□ -1.99
TOP1	YOL006C	GAL83	Q04739	417 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	SYM1	Q06563	197 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	ODC2	Q99297	307 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	TRM3	Q07527	1436 aa		2.62	□□□□□ -1.99
TOP1	YOL006C	TIM9	O74700	87 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	RPB9	P27999	122 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	SDH4	P37298	181 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	SFT2	P38166	215 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	GAT4	P40569	121 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	CAX4	P53223	239 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	YNR062C	P53748	327 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	ANT1	Q06497	328 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	FYV12	Q08559	129 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	SAS5	Q99314	248 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	KRE5	P22023	1365 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	BNR1	P40450	1375 aa		2.61	□□□□□ -1.99
TOP1	YOL006C	DUR1,2	P32528	1835 aa	Known RBP	2.61	□□□□□ -1.99
TOP1	YOL006C	DSK2	P48510	373 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	YDR274C	P87283	123 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	YAL067W-A	Q8TGK6	75 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	RAD6	P06104	172 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	UBC5	P15732	148 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	TOM40	P23644	387 aa	Known RBP	2.6	□□□□□ -1.99
TOP1	YOL006C	YCR043C	P25361	127 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	RFS1	P38234	210 aa	Known RBP	2.6	□□□□□ -1.99
TOP1	YOL006C	YEL028W	P39989	153 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	RRT13	P40042	185 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	MPM1	P40364	252 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	REE1	P40893	198 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	RSM10	Q03201	203 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	YML122C	Q03207	126 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	YDR102C	Q03864	110 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	DDP1	Q99321	188 aa	Known RBP	2.6	□□□□□ -1.99
TOP1	YOL006C	PDR11	P40550	1411 aa		2.6	□□□□□ -1.99
TOP1	YOL006C	DDR48	P18899	430 aa	Known RBP	2.59	□□□□□ -1.99
TOP1	YOL006C	HYP2	P23301	157 aa	Known RBP	2.59	□□□□□ -1.99
TOP1	YOL006C	YBL059W	P34224	193 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	YAR029W	P39549	74 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	YER188W	P40103	239 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	GNA1	P43577	159 aa	Predicted RBP	2.59	□□□□□ -1.99
TOP1	YOL006C	EAF6	P47128	113 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	RSM27	P53305	110 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	MRPS8	Q03799	155 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	UPS1	Q05776	175 aa		2.59	□□□□□ -1.99
TOP1	YOL006C	NOP1	P15646	327 aa	Known RBP	2.59	□□□□□ -2
TOP1	YOL006C	YHR125W	P38831	101 aa		2.59	□□□□□ -2
TOP1	YOL006C	NSA2	P40078	261 aa	Known RBP	2.59	□□□□□ -2
TOP1	YOL006C	LSM8	P47093	109 aa	Known RBP	2.59	□□□□□ -2
TOP1	YOL006C	YMR252C	Q04814	134 aa		2.59	□□□□□ -2
TOP1	YOL006C	YOR097C	Q12274	175 aa	Predicted RBP	2.59	□□□□□ -2
TOP1	YOL006C	FLO11	P08640	1367 aa		2.58	□□□□□ -2
TOP1	YOL006C	ATP20	Q12233	115 aa		2.58	□□□□□ -2
TOP1	YOL006C	YCR075W-A	Q3E830	75 aa		2.58	□□□□□ -2
TOP1	YOL006C	YRF1-3	P0CX14	1859 aa		2.58	□□□□□ -2
TOP1	YOL006C	YRF1-7	P0CX15	1859 aa		2.58	□□□□□ -2
TOP1	YOL006C	YRF1-6	P53819	1859 aa		2.58	□□□□□ -2
TOP1	YOL006C	ARO2	P28777	376 aa	Known RBP	2.58	□□□□□ -2
TOP1	YOL006C	UMP1	P38293	148 aa		2.58	□□□□□ -2
TOP1	YOL006C	YER135C	P40082	130 aa		2.58	□□□□□ -2
TOP1	YOL006C	BAT2	P47176	376 aa	Known RBP	2.58	□□□□□ -2
TOP1	YOL006C	YNR064C	P53750	290 aa		2.58	□□□□□ -2
TOP1	YOL006C	SMD1	Q02260	146 aa	Predicted RBP	2.58	□□□□□ -2
TOP1	YOL006C	RCE1	Q03530	315 aa		2.58	□□□□□ -2
TOP1	YOL006C	RRT7	Q07829	113 aa		2.58	□□□□□ -2
TOP1	YOL006C	SCP1	Q08873	200 aa		2.58	□□□□□ -2
TOP1	YOL006C	POR1	P04840	283 aa	Known RBP	2.57	□□□□□ -2
TOP1	YOL006C	SPT15	P13393	240 aa	Known RBP	2.57	□□□□□ -2
TOP1	YOL006C	PRE1	P22141	198 aa	Known RBP	2.57	□□□□□ -2
TOP1	YOL006C	ASK1	P35734	292 aa		2.57	□□□□□ -2
TOP1	YOL006C	ERV15	P38312	142 aa		2.57	□□□□□ -2
TOP1	YOL006C	CTR2	P38865	189 aa		2.57	□□□□□ -2
TOP1	YOL006C	ECO1	P43605	281 aa		2.57	□□□□□ -2
TOP1	YOL006C	SPG1	P50088	95 aa		2.57	□□□□□ -2
TOP1	YOL006C	YCR050C	P25630	102 aa		2.57	□□□□□ -2
TOP1	YOL006C	PEX4	P29340	183 aa		2.57	□□□□□ -2
TOP1	YOL006C	SWD3	P38123	315 aa		2.57	□□□□□ -2
TOP1	YOL006C	SPC25	P40014	221 aa		2.57	□□□□□ -2
TOP1	YOL006C	CUP9	P41817	306 aa		2.57	□□□□□ -2
TOP1	YOL006C	UIP4	Q08926	304 aa		2.57	□□□□□ -2
TOP1	YOL006C	GTT2	Q12390	233 aa		2.57	□□□□□ -2
TOP1	YOL006C	TY1B-PR2	P0C2J0	1756 aa		2.56	□□□□□ -2
TOP1	YOL006C	COX10	P21592	462 aa		2.56	□□□□□ -2
TOP1	YOL006C	GAA1	P39012	614 aa		2.56	□□□□□ -2
TOP1	YOL006C	PAM16	P42949	149 aa		2.56	□□□□□ -2
TOP1	YOL006C	SCW4	P53334	386 aa	Known RBP	2.56	□□□□□ -2
TOP1	YOL006C	YMR295C	Q03559	197 aa		2.56	□□□□□ -2
TOP1	YOL006C	KEI1	Q06346	221 aa		2.56	□□□□□ -2
TOP1	YOL006C	YGL194C-A	Q2V2P6	80 aa		2.56	□□□□□ -2
TOP1	YOL006C	RSF2	P46974	1380 aa		2.56	□□□□□ -2
TOP1	YOL006C	UBR1	P19812	1950 aa		2.56	□□□□□ -2
TOP1	YOL006C	RAS2	P01120	322 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms