RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C CSH1P38287 376 aa1.62□□□□□ -2.15
BLS1YLR408C HSK3P69852 69 aa1.62□□□□□ -2.15
BLS1YLR408C FIT1Q04433 528 aa1.62□□□□□ -2.15
BLS1YLR408C NQM1P53228 333 aaPredicted RBP1.61□□□□□ -2.15
BLS1YLR408C CMD1P06787 147 aaKnown RBP1.6□□□□□ -2.15
BLS1YLR408C THI74Q04083 370 aa1.6□□□□□ -2.15
BLS1YLR408C SLH1P53327 1967 aaKnown RBP1.59□□□□□ -2.15
BLS1YLR408C YEL028WP39989 153 aa1.59□□□□□ -2.15
BLS1YLR408C YFL051CP43552 160 aa1.59□□□□□ -2.15
BLS1YLR408C HHT1P61830 136 aa1.59□□□□□ -2.15
BLS1YLR408C AIM36Q03798 255 aa1.59□□□□□ -2.15
BLS1YLR408C GIM5Q04493 163 aa1.59□□□□□ -2.15
BLS1YLR408C SYM1Q06563 197 aa1.59□□□□□ -2.15
BLS1YLR408C SHB17P36136 271 aaKnown RBP1.58□□□□□ -2.16
BLS1YLR408C MOB1P40484 314 aa1.58□□□□□ -2.16
BLS1YLR408C DCV1P43595 202 aa1.58□□□□□ -2.16
BLS1YLR408C YGL230CP53074 147 aa1.58□□□□□ -2.16
BLS1YLR408C YML079WQ03629 201 aa1.58□□□□□ -2.16
BLS1YLR408C CHD1P32657 1468 aa1.56□□□□□ -2.16
BLS1YLR408C YLR422WQ06409 1932 aa1.56□□□□□ -2.16
BLS1YLR408C SPS2P08459 502 aa1.56□□□□□ -2.16
BLS1YLR408C UGX2P32772 223 aa1.56□□□□□ -2.16
BLS1YLR408C VPS51P36116 164 aa1.56□□□□□ -2.16
BLS1YLR408C AVO2Q04749 426 aa1.56□□□□□ -2.16
BLS1YLR408C CCW12Q12127 133 aa1.56□□□□□ -2.16
BLS1YLR408C TRM3Q07527 1436 aa1.56□□□□□ -2.16
BLS1YLR408C YKR070WP36151 352 aaKnown RBP1.55□□□□□ -2.16
BLS1YLR408C YGR269WP40326 108 aa1.55□□□□□ -2.16
BLS1YLR408C LIP1Q03579 150 aa1.54□□□□□ -2.16
BLS1YLR408C ATG10Q07879 167 aa1.54□□□□□ -2.16
BLS1YLR408C YDL157CQ12082 118 aa1.54□□□□□ -2.16
BLS1YLR408C INO4P13902 151 aa1.53□□□□□ -2.16
BLS1YLR408C YER121WP40076 114 aa1.53□□□□□ -2.16
BLS1YLR408C YGL101WP53144 215 aa1.53□□□□□ -2.16
BLS1YLR408C HRD1Q08109 551 aa1.53□□□□□ -2.16
BLS1YLR408C RPS25BP0C0T4 108 aaKnown RBP1.52□□□□□ -2.17
BLS1YLR408C YJR015WP47090 510 aa1.52□□□□□ -2.17
BLS1YLR408C TMA20P89886 181 aaPredicted RBP1.52□□□□□ -2.17
BLS1YLR408C YDR102CQ03864 110 aa1.52□□□□□ -2.17
BLS1YLR408C RPS25AQ3E792 108 aaPredicted RBP1.52□□□□□ -2.17
BLS1YLR408C SAC3P46674 1301 aa1.51□□□□□ -2.17
BLS1YLR408C YDC1Q02896 317 aa1.51□□□□□ -2.17
BLS1YLR408C YPR114WQ06107 315 aa1.51□□□□□ -2.17
BLS1YLR408C RDI1Q12434 202 aa1.51□□□□□ -2.17
BLS1YLR408C PRE1P22141 198 aaKnown RBP1.5□□□□□ -2.17
BLS1YLR408C YPT31P38555 223 aaKnown RBP1.5□□□□□ -2.17
BLS1YLR408C GLC8P41818 229 aa1.5□□□□□ -2.17
BLS1YLR408C KEI1Q06346 221 aa1.5□□□□□ -2.17
BLS1YLR408C YDL241WQ07738 123 aa1.5□□□□□ -2.17
BLS1YLR408C YLR053CQ12026 108 aa1.5□□□□□ -2.17
BLS1YLR408C PTC1P35182 281 aa1.49□□□□□ -2.17
BLS1YLR408C SRP102P36057 244 aaPredicted RBP1.49□□□□□ -2.17
BLS1YLR408C YAR064WP39563 99 aa1.49□□□□□ -2.17
BLS1YLR408C YIL102CP40488 101 aa1.49□□□□□ -2.17
BLS1YLR408C ORM1P53224 222 aa1.48□□□□□ -2.17
BLS1YLR408C UIP4Q08926 304 aa1.48□□□□□ -2.17
BLS1YLR408C CMC2Q3E7A4 109 aa1.48□□□□□ -2.17
BLS1YLR408C DUR1,2P32528 1835 aaKnown RBP1.47□□□□□ -2.17
BLS1YLR408C KIN28P06242 306 aa1.47□□□□□ -2.17
BLS1YLR408C ATP5P09457 212 aa1.47□□□□□ -2.17
BLS1YLR408C UBI4P0CG63 381 aaKnown RBP1.46□□□□□ -2.18
BLS1YLR408C SPT14P32363 452 aa1.46□□□□□ -2.18
BLS1YLR408C UBC6P33296 250 aaPredicted RBP1.46□□□□□ -2.18
BLS1YLR408C FES1P38260 290 aa1.46□□□□□ -2.18
BLS1YLR408C YNR064CP53750 290 aa1.46□□□□□ -2.18
BLS1YLR408C CCC1P47818 322 aa1.45□□□□□ -2.18
BLS1YLR408C HTD2P38790 280 aaKnown RBP1.44□□□□□ -2.18
BLS1YLR408C APS3P47064 194 aa1.44□□□□□ -2.18
BLS1YLR408C GEP7P53171 287 aa1.44□□□□□ -2.18
BLS1YLR408C LSM3P57743 89 aaKnown RBP1.44□□□□□ -2.18
BLS1YLR408C FCY1Q12178 158 aa1.44□□□□□ -2.18
BLS1YLR408C TMA23Q03525 211 aa1.43□□□□□ -2.18
BLS1YLR408C FMP49A0A023PZB3 126 aa1.42□□□□□ -2.18
BLS1YLR408C DLS1P40366 167 aa1.42□□□□□ -2.18
BLS1YLR408C CIN5P40917 295 aa1.42□□□□□ -2.18
BLS1YLR408C MAK3Q03503 176 aa1.42□□□□□ -2.18
BLS1YLR408C YLR046CQ12253 270 aa1.42□□□□□ -2.18
BLS1YLR408C CMC4Q3E7A9 73 aa1.42□□□□□ -2.18
BLS1YLR408C MRS4P23500 304 aa1.41□□□□□ -2.18
BLS1YLR408C YCR001WP25347 104 aa1.4□□□□□ -2.19
BLS1YLR408C YBR027CP38220 110 aa1.4□□□□□ -2.19
BLS1YLR408C TAF2P23255 1407 aa1.4□□□□□ -2.19
BLS1YLR408C QCR2P07257 368 aa1.39□□□□□ -2.19
BLS1YLR408C YEL014CP39999 101 aa1.39□□□□□ -2.19
BLS1YLR408C YDR476CQ03362 224 aa1.39□□□□□ -2.19
BLS1YLR408C NSL1Q12143 216 aa1.39□□□□□ -2.19
BLS1YLR408C ADE6P38972 1358 aaKnown RBP1.38□□□□□ -2.19
BLS1YLR408C YOL013W-AP0C272 63 aaPredicted RBP1.38□□□□□ -2.19
BLS1YLR408C RPL30P14120 105 aaKnown RBP1.38□□□□□ -2.19
BLS1YLR408C FIP1P45976 327 aa1.38□□□□□ -2.19
BLS1YLR408C YPR202WQ08993 238 aa1.38□□□□□ -2.19
BLS1YLR408C SRP21P32342 167 aa1.37□□□□□ -2.19
BLS1YLR408C APQ12P40532 138 aa1.37□□□□□ -2.19
BLS1YLR408C NMA1Q06178 401 aaKnown RBP1.37□□□□□ -2.19
BLS1YLR408C ATG8P38182 117 aaRIP-Chip data1.36□□□□□ -2.19not detected
BLS1YLR408C AME1P38313 324 aa1.36□□□□□ -2.19
BLS1YLR408C SLM6P38343 150 aa1.36□□□□□ -2.19
BLS1YLR408C EFG1Q3E705 233 aaKnown RBP1.36□□□□□ -2.19
BLS1YLR408C HSP150P32478 413 aa1.35□□□□□ -2.19
BLS1YLR408C FMN1Q03778 218 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms