RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C AGA2P32781 87 aa2.72□□□□□ -1.97
VPS33YLR396C TIR2P33890 251 aa2.72□□□□□ -1.97
VPS33YLR396C ECM34P38728 170 aa2.72□□□□□ -1.97
VPS33YLR396C POP2P39008 433 aa2.72□□□□□ -1.97
VPS33YLR396C YER134CP40081 178 aa2.72□□□□□ -1.97
VPS33YLR396C RPL13BP40212 199 aaKnown RBP2.72□□□□□ -1.97
VPS33YLR396C YFR057WP43625 151 aa2.72□□□□□ -1.97
VPS33YLR396C HIT1P46973 164 aa2.72□□□□□ -1.97
VPS33YLR396C RPN14P53196 417 aa2.72□□□□□ -1.97
VPS33YLR396C MRX8Q05473 314 aa2.72□□□□□ -1.97
VPS33YLR396C LOA1Q06508 300 aa2.72□□□□□ -1.97
VPS33YLR396C BSC6Q08280 497 aa2.72□□□□□ -1.97
VPS33YLR396C RPL13AQ12690 199 aaPredicted RBP2.72□□□□□ -1.97
VPS33YLR396C YOR304C-AO14468 76 aa2.72□□□□□ -1.97
VPS33YLR396C URA5P13298 226 aaKnown RBP2.72□□□□□ -1.97
VPS33YLR396C YGL010WP25338 174 aa2.72□□□□□ -1.97
VPS33YLR396C MDH3P32419 343 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
VPS33YLR396C YHR127WP38833 243 aaKnown RBP2.72□□□□□ -1.97
VPS33YLR396C MIG3P39943 394 aa2.72□□□□□ -1.97
VPS33YLR396C CRH1P53301 507 aa2.72□□□□□ -1.97
VPS33YLR396C APS2Q00381 147 aa2.72□□□□□ -1.97
VPS33YLR396C YPL077CQ02831 240 aa2.72□□□□□ -1.97
VPS33YLR396C YMR310CQ04867 317 aaPredicted RBP2.72□□□□□ -1.97
VPS33YLR396C FCY22Q12119 530 aa2.72□□□□□ -1.97
VPS33YLR396C FRE8Q12209 686 aa2.72□□□□□ -1.97
VPS33YLR396C PEX11Q12462 236 aa2.72□□□□□ -1.97
VPS33YLR396C COA2Q3E823 68 aa2.72□□□□□ -1.97
VPS33YLR396C DAL82P21705 255 aa2.71□□□□□ -1.98
VPS33YLR396C SCO1P23833 295 aa2.71□□□□□ -1.98
VPS33YLR396C YCR025CP25352 136 aa2.71□□□□□ -1.98
VPS33YLR396C ARO4P32449 370 aaKnown RBP2.71□□□□□ -1.98
VPS33YLR396C YNL198CP40166 100 aa2.71□□□□□ -1.98
VPS33YLR396C RPL21AQ02753 160 aaKnown RBP2.71□□□□□ -1.98
VPS33YLR396C ELC1Q03071 99 aa2.71□□□□□ -1.98
VPS33YLR396C YMR166CQ03829 368 aa2.71□□□□□ -1.98
VPS33YLR396C THI74Q04083 370 aa2.71□□□□□ -1.98
VPS33YLR396C YLR012CQ07927 99 aa2.71□□□□□ -1.98
VPS33YLR396C YPR064WQ12492 139 aa2.71□□□□□ -1.98
VPS33YLR396C RPL21BQ12672 160 aaKnown RBP2.71□□□□□ -1.98
VPS33YLR396C YCR075W-AQ3E830 75 aa2.71□□□□□ -1.98
VPS33YLR396C FMP49A0A023PZB3 126 aa2.7□□□□□ -1.98
VPS33YLR396C SEC11P15367 167 aa2.7□□□□□ -1.98
VPS33YLR396C SPO13P23624 291 aa2.7□□□□□ -1.98
VPS33YLR396C AHT1P29589 182 aa2.7□□□□□ -1.98
VPS33YLR396C OCH1P31755 480 aa2.7□□□□□ -1.98
VPS33YLR396C IML3P38265 245 aa2.7□□□□□ -1.98
VPS33YLR396C BAT1P38891 393 aaKnown RBP2.7□□□□□ -1.98
VPS33YLR396C RPB11P38902 120 aa2.7□□□□□ -1.98
VPS33YLR396C TEM1P38987 245 aa2.7□□□□□ -1.98
VPS33YLR396C APQ12P40532 138 aa2.7□□□□□ -1.98
VPS33YLR396C YJR015WP47090 510 aa2.7□□□□□ -1.98
VPS33YLR396C ERG25P53045 309 aa2.7□□□□□ -1.98
VPS33YLR396C YGL230CP53074 147 aa2.7□□□□□ -1.98
VPS33YLR396C DAD3P69850 94 aa2.7□□□□□ -1.98
VPS33YLR396C YPL162CQ12042 273 aa2.7□□□□□ -1.98
VPS33YLR396C YDL211CQ12121 372 aa2.7□□□□□ -1.98
VPS33YLR396C MCT1Q12283 360 aa2.7□□□□□ -1.98
VPS33YLR396C YDR262WQ12331 272 aa2.7□□□□□ -1.98
VPS33YLR396C SCS22Q6Q595 175 aa2.7□□□□□ -1.98
VPS33YLR396C DET1Q99288 334 aaKnown RBP2.7□□□□□ -1.98
VPS33YLR396C MRP49P32388 137 aa2.7□□□□□ -1.98
VPS33YLR396C GGC1P38988 300 aa2.7□□□□□ -1.98
VPS33YLR396C OXA1P39952 402 aa2.7□□□□□ -1.98
VPS33YLR396C XPT1P47165 209 aa2.7□□□□□ -1.98
VPS33YLR396C YGL235WP53071 178 aa2.7□□□□□ -1.98
VPS33YLR396C PDR17P53844 350 aa2.7□□□□□ -1.98
VPS33YLR396C TSA2Q04120 196 aa2.7□□□□□ -1.98
VPS33YLR396C YPR174CQ06616 221 aaPredicted RBP2.7□□□□□ -1.98
VPS33YLR396C YOS1Q3E834 85 aa2.7□□□□□ -1.98
VPS33YLR396C ADH1P00330 348 aaKnown RBP2.69□□□□□ -1.98
VPS33YLR396C SPS18P32572 300 aa2.69□□□□□ -1.98
VPS33YLR396C SGE1P33335 543 aa2.69□□□□□ -1.98
VPS33YLR396C SHB17P36136 271 aaKnown RBP2.69□□□□□ -1.98
VPS33YLR396C OM14P38325 134 aa2.69□□□□□ -1.98
VPS33YLR396C PCL7P40186 285 aa2.69□□□□□ -1.98
VPS33YLR396C PIR1Q03178 341 aa2.69□□□□□ -1.98
VPS33YLR396C YPR114WQ06107 315 aa2.69□□□□□ -1.98
VPS33YLR396C NAT3Q06504 195 aa2.69□□□□□ -1.98
VPS33YLR396C ATO3Q12359 275 aa2.69□□□□□ -1.98
VPS33YLR396C NAG1Q8TGN9 163 aa2.69□□□□□ -1.98
VPS33YLR396C UBA3Q99344 299 aa2.69□□□□□ -1.98
VPS33YLR396C STE7P06784 515 aa2.69□□□□□ -1.98
VPS33YLR396C MEK1P24719 497 aaPredicted RBP2.69□□□□□ -1.98
VPS33YLR396C PPA2P28239 310 aa2.69□□□□□ -1.98
VPS33YLR396C ECM33P38248 429 aaKnown RBP2.69□□□□□ -1.98
VPS33YLR396C MSL1P40567 111 aaPredicted RBP2.69□□□□□ -1.98
VPS33YLR396C YMR090WQ04304 227 aaKnown RBP2.69□□□□□ -1.98
VPS33YLR396C GAT3Q07928 141 aa2.69□□□□□ -1.98
VPS33YLR396C HRT1Q08273 121 aa2.69□□□□□ -1.98
VPS33YLR396C YLR363W-AQ3E747 85 aa2.69□□□□□ -1.98
VPS33YLR396C HMX1P32339 317 aa2.68□□□□□ -1.98
VPS33YLR396C TIM12P32830 109 aa2.68□□□□□ -1.98
VPS33YLR396C GPX1P36014 167 aa2.68□□□□□ -1.98
VPS33YLR396C YKL071WP36086 256 aa2.68□□□□□ -1.98
VPS33YLR396C PAM17P36147 197 aa2.68□□□□□ -1.98
VPS33YLR396C YKR070WP36151 352 aaKnown RBP2.68□□□□□ -1.98
VPS33YLR396C TRM7P38238 310 aaKnown RBP2.68□□□□□ -1.98
VPS33YLR396C YHL026CP38740 315 aa2.68□□□□□ -1.98
VPS33YLR396C YIL012WP40551 113 aa2.68□□□□□ -1.98
VPS33YLR396C COQ5P49017 307 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms