RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ETR1P38071 380 aa1.17□□□□□ -2.22
SMD2YLR275W YEL073CP39974 107 aa1.17□□□□□ -2.22
SMD2YLR275W MOB1P40484 314 aa1.17□□□□□ -2.22
SMD2YLR275W HSK3P69852 69 aa1.17□□□□□ -2.22
SMD2YLR275W TMA20P89886 181 aaPredicted RBP1.17□□□□□ -2.22
SMD2YLR275W HRD1Q08109 551 aa1.17□□□□□ -2.22
SMD2YLR275W UBC8P28263 218 aa1.16□□□□□ -2.22
SMD2YLR275W AHT1P29589 182 aa1.16□□□□□ -2.22
SMD2YLR275W YBR242WP38331 238 aa1.16□□□□□ -2.22
SMD2YLR275W YEL028WP39989 153 aa1.16□□□□□ -2.22
SMD2YLR275W YER121WP40076 114 aa1.15□□□□□ -2.23
SMD2YLR275W PAC10P48363 199 aa1.15□□□□□ -2.23
SMD2YLR275W SYM1Q06563 197 aa1.15□□□□□ -2.23
SMD2YLR275W PTC1P35182 281 aa1.14□□□□□ -2.23
SMD2YLR275W YGL101WP53144 215 aa1.14□□□□□ -2.23
SMD2YLR275W NQM1P53228 333 aaPredicted RBP1.14□□□□□ -2.23
SMD2YLR275W YML079WQ03629 201 aa1.14□□□□□ -2.23
SMD2YLR275W YPR203WQ08994 102 aa1.14□□□□□ -2.23
SMD2YLR275W LIP1Q03579 150 aa1.13□□□□□ -2.23
SMD2YLR275W FIT1Q04433 528 aa1.13□□□□□ -2.23
SMD2YLR275W YLR053CQ12026 108 aa1.13□□□□□ -2.23
SMD2YLR275W YDL157CQ12082 118 aa1.13□□□□□ -2.23
SMD2YLR275W DUR1,2P32528 1835 aaKnown RBP1.12□□□□□ -2.23
SMD2YLR275W UBC6P33296 250 aaPredicted RBP1.12□□□□□ -2.23
SMD2YLR275W YHL037CP38733 133 aa1.12□□□□□ -2.23
SMD2YLR275W YGR269WP40326 108 aa1.12□□□□□ -2.23
SMD2YLR275W YFL051CP43552 160 aa1.12□□□□□ -2.23
SMD2YLR275W TLG1Q03322 224 aa1.12□□□□□ -2.23
SMD2YLR275W YDR476CQ03362 224 aa1.12□□□□□ -2.23
SMD2YLR275W MAK3Q03503 176 aa1.12□□□□□ -2.23
SMD2YLR275W UIP4Q08926 304 aa1.12□□□□□ -2.23
SMD2YLR275W RDI1Q12434 202 aa1.12□□□□□ -2.23
SMD2YLR275W QCR2P07257 368 aa1.11□□□□□ -2.23
SMD2YLR275W AVO2Q04749 426 aa1.11□□□□□ -2.23
SMD2YLR275W YLR046CQ12253 270 aa1.11□□□□□ -2.23
SMD2YLR275W SPS2P08459 502 aa1.1□□□□□ -2.23
SMD2YLR275W FES1P38260 290 aa1.1□□□□□ -2.23
SMD2YLR275W ATP5P09457 212 aa1.09□□□□□ -2.23
SMD2YLR275W YER188C-AP0C0V2 99 aa1.09□□□□□ -2.23
SMD2YLR275W UBI4P0CG63 381 aaKnown RBP1.09□□□□□ -2.23
SMD2YLR275W PRE1P22141 198 aaKnown RBP1.09□□□□□ -2.23
SMD2YLR275W SRP102P36057 244 aaPredicted RBP1.09□□□□□ -2.23
SMD2YLR275W RPL37BP51402 88 aaKnown RBP1.09□□□□□ -2.23
SMD2YLR275W ORM1P53224 222 aa1.09□□□□□ -2.23
SMD2YLR275W LSM3P57743 89 aaKnown RBP1.09□□□□□ -2.23
SMD2YLR275W ATG10Q07879 167 aa1.09□□□□□ -2.23
SMD2YLR275W SLH1P53327 1967 aaKnown RBP1.08□□□□□ -2.24
SMD2YLR275W RPS25BP0C0T4 108 aaKnown RBP1.08□□□□□ -2.24
SMD2YLR275W RPS28BP0C0X0 67 aaKnown RBP1.08□□□□□ -2.24
SMD2YLR275W RME1P32338 300 aaKnown RBP1.08□□□□□ -2.24
SMD2YLR275W SHB17P36136 271 aaKnown RBP1.08□□□□□ -2.24
SMD2YLR275W DCV1P43595 202 aa1.08□□□□□ -2.24
SMD2YLR275W CCC1P47818 322 aa1.08□□□□□ -2.24
SMD2YLR275W YNR064CP53750 290 aa1.08□□□□□ -2.24
SMD2YLR275W YPR114WQ06107 315 aa1.08□□□□□ -2.24
SMD2YLR275W LCL2Q08045 131 aa1.08□□□□□ -2.24
SMD2YLR275W RPS25AQ3E792 108 aaPredicted RBP1.08□□□□□ -2.24
SMD2YLR275W RPS28AQ3E7X9 67 aaPredicted RBP1.08□□□□□ -2.24
SMD2YLR275W AME1P38313 324 aa1.07□□□□□ -2.24
SMD2YLR275W YPT31P38555 223 aaKnown RBP1.07□□□□□ -2.24
SMD2YLR275W HTD2P38790 280 aaKnown RBP1.07□□□□□ -2.24
SMD2YLR275W YGL230CP53074 147 aa1.07□□□□□ -2.24
SMD2YLR275W GEP7P53171 287 aa1.07□□□□□ -2.24
SMD2YLR275W YDR102CQ03864 110 aa1.07□□□□□ -2.24
SMD2YLR275W YDL241WQ07738 123 aa1.07□□□□□ -2.24
SMD2YLR275W INO4P13902 151 aa1.06□□□□□ -2.24
SMD2YLR275W RPL30P14120 105 aaKnown RBP1.06□□□□□ -2.24
SMD2YLR275W YKR070WP36151 352 aaKnown RBP1.06□□□□□ -2.24
SMD2YLR275W YAR064WP39563 99 aa1.06□□□□□ -2.24
SMD2YLR275W DLS1P40366 167 aa1.06□□□□□ -2.24
SMD2YLR275W YGL193CP53097 103 aa1.06□□□□□ -2.24
SMD2YLR275W YPR202WQ08993 238 aa1.06□□□□□ -2.24
SMD2YLR275W SLM6P38343 150 aa1.05□□□□□ -2.24
SMD2YLR275W APQ12P40532 138 aa1.05□□□□□ -2.24
SMD2YLR275W CIN5P40917 295 aa1.05□□□□□ -2.24
SMD2YLR275W YJR015WP47090 510 aa1.05□□□□□ -2.24
SMD2YLR275W FCY1Q12178 158 aa1.05□□□□□ -2.24
SMD2YLR275W ADE6P38972 1358 aaKnown RBP1.05□□□□□ -2.24
SMD2YLR275W TAF2P23255 1407 aa1.05□□□□□ -2.24
SMD2YLR275W SPA2P23201 1466 aaKnown RBP1.05□□□□□ -2.24
SMD2YLR275W PBI2P0CT04 75 aaKnown RBP1.04□□□□□ -2.24
SMD2YLR275W PEX34P25584 144 aa1.04□□□□□ -2.24
SMD2YLR275W BUB2P26448 306 aaPredicted RBP1.04□□□□□ -2.24
SMD2YLR275W SPT14P32363 452 aa1.04□□□□□ -2.24
SMD2YLR275W DER1P38307 211 aa1.04□□□□□ -2.24
SMD2YLR275W YIL102CP40488 101 aa1.04□□□□□ -2.24
SMD2YLR275W AIM36Q03798 255 aa1.04□□□□□ -2.24
SMD2YLR275W CCW12Q12127 133 aa1.04□□□□□ -2.24
SMD2YLR275W NSL1Q12143 216 aa1.04□□□□□ -2.24
SMD2YLR275W KIN28P06242 306 aa1.03□□□□□ -2.24
SMD2YLR275W YEL014CP39999 101 aa1.03□□□□□ -2.24
SMD2YLR275W FIP1P45976 327 aa1.03□□□□□ -2.24
SMD2YLR275W YDC1Q02896 317 aa1.03□□□□□ -2.24
SMD2YLR275W KEI1Q06346 221 aa1.03□□□□□ -2.24
SMD2YLR275W UGX2P32772 223 aa1.02□□□□□ -2.25
SMD2YLR275W APS3P47064 194 aa1.02□□□□□ -2.25
SMD2YLR275W YPD1Q07688 167 aa1.02□□□□□ -2.25
SMD2YLR275W EFG1Q3E705 233 aaKnown RBP1.02□□□□□ -2.25
SMD2YLR275W MRS4P23500 304 aa1.01□□□□□ -2.25
SMD2YLR275W GLC8P41818 229 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms