RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SYM1Q06563 197 aa0.83□□□□□ -2.28
SEC22YLR268W AHT1P29589 182 aa0.82□□□□□ -2.28
SEC22YLR268W VPS51P36116 164 aa0.82□□□□□ -2.28
SEC22YLR268W YEL073CP39974 107 aa0.82□□□□□ -2.28
SEC22YLR268W YML079WQ03629 201 aa0.82□□□□□ -2.28
SEC22YLR268W GIM5Q04493 163 aa0.82□□□□□ -2.28
SEC22YLR268W HRD1Q08109 551 aa0.82□□□□□ -2.28
SEC22YLR268W CSH1P38287 376 aa0.81□□□□□ -2.28
SEC22YLR268W PAC10P48363 199 aa0.81□□□□□ -2.28
SEC22YLR268W TMA20P89886 181 aaPredicted RBP0.81□□□□□ -2.28
SEC22YLR268W THI74Q04083 370 aa0.81□□□□□ -2.28
SEC22YLR268W FIT1Q04433 528 aa0.81□□□□□ -2.28
SEC22YLR268W YPR203WQ08994 102 aa0.81□□□□□ -2.28
SEC22YLR268W CMC2Q3E7A4 109 aa0.81□□□□□ -2.28
SEC22YLR268W DUR1,2P32528 1835 aaKnown RBP0.8□□□□□ -2.28
SEC22YLR268W YEL028WP39989 153 aa0.8□□□□□ -2.28
SEC22YLR268W YGR269WP40326 108 aa0.8□□□□□ -2.28
SEC22YLR268W HSK3P69852 69 aa0.8□□□□□ -2.28
SEC22YLR268W PTC1P35182 281 aa0.79□□□□□ -2.28
SEC22YLR268W YFL051CP43552 160 aa0.79□□□□□ -2.28
SEC22YLR268W LIP1Q03579 150 aa0.79□□□□□ -2.28
SEC22YLR268W UIP4Q08926 304 aa0.79□□□□□ -2.28
SEC22YLR268W YDL157CQ12082 118 aa0.79□□□□□ -2.28
SEC22YLR268W SLH1P53327 1967 aaKnown RBP0.78□□□□□ -2.28
SEC22YLR268W UBC6P33296 250 aaPredicted RBP0.78□□□□□ -2.28
SEC22YLR268W YHL037CP38733 133 aa0.78□□□□□ -2.28
SEC22YLR268W YER121WP40076 114 aa0.78□□□□□ -2.28
SEC22YLR268W RPL37BP51402 88 aaKnown RBP0.78□□□□□ -2.28
SEC22YLR268W LCL2Q08045 131 aa0.78□□□□□ -2.28
SEC22YLR268W SPS2P08459 502 aa0.77□□□□□ -2.29
SEC22YLR268W RPS25BP0C0T4 108 aaKnown RBP0.77□□□□□ -2.29
SEC22YLR268W INO4P13902 151 aa0.77□□□□□ -2.29
SEC22YLR268W PRE1P22141 198 aaKnown RBP0.77□□□□□ -2.29
SEC22YLR268W SRP102P36057 244 aaPredicted RBP0.77□□□□□ -2.29
SEC22YLR268W YAR064WP39563 99 aa0.77□□□□□ -2.29
SEC22YLR268W DCV1P43595 202 aa0.77□□□□□ -2.29
SEC22YLR268W YGL230CP53074 147 aa0.77□□□□□ -2.29
SEC22YLR268W YGL101WP53144 215 aa0.77□□□□□ -2.29
SEC22YLR268W YNR064CP53750 290 aa0.77□□□□□ -2.29
SEC22YLR268W MAK3Q03503 176 aa0.77□□□□□ -2.29
SEC22YLR268W AIM36Q03798 255 aa0.77□□□□□ -2.29
SEC22YLR268W AVO2Q04749 426 aa0.77□□□□□ -2.29
SEC22YLR268W ATG10Q07879 167 aa0.77□□□□□ -2.29
SEC22YLR268W YLR053CQ12026 108 aa0.77□□□□□ -2.29
SEC22YLR268W YLR046CQ12253 270 aa0.77□□□□□ -2.29
SEC22YLR268W RPS25AQ3E792 108 aaPredicted RBP0.77□□□□□ -2.29
SEC22YLR268W ATP5P09457 212 aa0.76□□□□□ -2.29
SEC22YLR268W SHB17P36136 271 aaKnown RBP0.76□□□□□ -2.29
SEC22YLR268W YKR070WP36151 352 aaKnown RBP0.76□□□□□ -2.29
SEC22YLR268W FES1P38260 290 aa0.76□□□□□ -2.29
SEC22YLR268W YIL102CP40488 101 aa0.76□□□□□ -2.29
SEC22YLR268W GEP7P53171 287 aa0.76□□□□□ -2.29
SEC22YLR268W LSM3P57743 89 aaKnown RBP0.76□□□□□ -2.29
SEC22YLR268W YDR476CQ03362 224 aa0.76□□□□□ -2.29
SEC22YLR268W RDI1Q12434 202 aa0.76□□□□□ -2.29
SEC22YLR268W SPA2P23201 1466 aaKnown RBP0.75□□□□□ -2.29
SEC22YLR268W TAF2P23255 1407 aa0.75□□□□□ -2.29
SEC22YLR268W ADE6P38972 1358 aaKnown RBP0.75□□□□□ -2.29
SEC22YLR268W QCR2P07257 368 aa0.75□□□□□ -2.29
SEC22YLR268W YER188C-AP0C0V2 99 aa0.75□□□□□ -2.29
SEC22YLR268W UBI4P0CG63 381 aaKnown RBP0.75□□□□□ -2.29
SEC22YLR268W YPT31P38555 223 aaKnown RBP0.75□□□□□ -2.29
SEC22YLR268W APS3P47064 194 aa0.75□□□□□ -2.29
SEC22YLR268W YJR015WP47090 510 aa0.75□□□□□ -2.29
SEC22YLR268W ORM1P53224 222 aa0.75□□□□□ -2.29
SEC22YLR268W YPR114WQ06107 315 aa0.75□□□□□ -2.29
SEC22YLR268W CCW12Q12127 133 aa0.75□□□□□ -2.29
SEC22YLR268W KIN28P06242 306 aa0.74□□□□□ -2.29
SEC22YLR268W UGX2P32772 223 aa0.74□□□□□ -2.29
SEC22YLR268W CIN5P40917 295 aa0.74□□□□□ -2.29
SEC22YLR268W CCC1P47818 322 aa0.74□□□□□ -2.29
SEC22YLR268W YDL241WQ07738 123 aa0.74□□□□□ -2.29
SEC22YLR268W FCY1Q12178 158 aa0.74□□□□□ -2.29
SEC22YLR268W RPL30P14120 105 aaKnown RBP0.73□□□□□ -2.29
SEC22YLR268W SPT14P32363 452 aa0.73□□□□□ -2.29
SEC22YLR268W AME1P38313 324 aa0.73□□□□□ -2.29
SEC22YLR268W SLM6P38343 150 aa0.73□□□□□ -2.29
SEC22YLR268W HTD2P38790 280 aaKnown RBP0.73□□□□□ -2.29
SEC22YLR268W TLG1Q03322 224 aa0.73□□□□□ -2.29
SEC22YLR268W YDR102CQ03864 110 aa0.73□□□□□ -2.29
SEC22YLR268W KEI1Q06346 221 aa0.73□□□□□ -2.29
SEC22YLR268W DLS1P40366 167 aa0.72□□□□□ -2.29
SEC22YLR268W APQ12P40532 138 aa0.72□□□□□ -2.29
SEC22YLR268W GLC8P41818 229 aa0.72□□□□□ -2.29
SEC22YLR268W YGL193CP53097 103 aa0.72□□□□□ -2.29
SEC22YLR268W YDC1Q02896 317 aa0.72□□□□□ -2.29
SEC22YLR268W YPD1Q07688 167 aa0.72□□□□□ -2.29
SEC22YLR268W VAM10Q08474 114 aa0.72□□□□□ -2.29
SEC22YLR268W YPR202WQ08993 238 aa0.72□□□□□ -2.29
SEC22YLR268W FMP49A0A023PZB3 126 aa0.71□□□□□ -2.3
SEC22YLR268W PBI2P0CT04 75 aaKnown RBP0.71□□□□□ -2.3
SEC22YLR268W PEX34P25584 144 aa0.71□□□□□ -2.3
SEC22YLR268W BUB2P26448 306 aaPredicted RBP0.71□□□□□ -2.3
SEC22YLR268W ECM31P38122 312 aa0.71□□□□□ -2.3
SEC22YLR268W YEL014CP39999 101 aa0.71□□□□□ -2.3
SEC22YLR268W FIP1P45976 327 aa0.71□□□□□ -2.3
SEC22YLR268W TMA23Q03525 211 aa0.71□□□□□ -2.3
SEC22YLR268W NMA1Q06178 401 aaKnown RBP0.71□□□□□ -2.3
SEC22YLR268W HFA1P32874 2273 aa0.7□□□□□ -2.3
SEC22YLR268W RPS28BP0C0X0 67 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms