RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SPA2P23201 1466 aaKnown RBP0.8□□□□□ -2.28
RPL40BYKR094C STF2P16965 84 aa0.8□□□□□ -2.28
RPL40BYKR094C PHO85P17157 305 aa0.8□□□□□ -2.28
RPL40BYKR094C CPR5P35176 225 aa0.8□□□□□ -2.28
RPL40BYKR094C YRA2P36036 203 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
RPL40BYKR094C CSH1P38287 376 aa0.8□□□□□ -2.28
RPL40BYKR094C SLM6P38343 150 aa0.8□□□□□ -2.28
RPL40BYKR094C FYV4P38783 130 aaPredicted RBP0.8□□□□□ -2.28
RPL40BYKR094C HYR1P40581 163 aaKnown RBP0.8□□□□□ -2.28
RPL40BYKR094C THG1P53215 237 aaKnown RBP0.8□□□□□ -2.28
RPL40BYKR094C YML079WQ03629 201 aa0.8□□□□□ -2.28
RPL40BYKR094C DML1Q03652 475 aa0.8□□□□□ -2.28
RPL40BYKR094C PKR1Q03880 122 aaKnown RBP0.8□□□□□ -2.28
RPL40BYKR094C RNH202Q05635 350 aa0.8□□□□□ -2.28
RPL40BYKR094C ATG41Q12048 136 aa0.8□□□□□ -2.28
RPL40BYKR094C YDL157CQ12082 118 aa0.8□□□□□ -2.28
RPL40BYKR094C YMR030W-AQ3E760 96 aa0.8□□□□□ -2.28
RPL40BYKR094C RPB7P34087 171 aa0.79□□□□□ -2.28
RPL40BYKR094C HTD2P38790 280 aaKnown RBP0.79□□□□□ -2.28
RPL40BYKR094C YEL073CP39974 107 aa0.79□□□□□ -2.28
RPL40BYKR094C HPA3P39979 161 aa0.79□□□□□ -2.28
RPL40BYKR094C YNL200CP40165 246 aaKnown RBP0.79□□□□□ -2.28
RPL40BYKR094C FLX1P40464 311 aa0.79□□□□□ -2.28
RPL40BYKR094C NSE4P43124 402 aa0.79□□□□□ -2.28
RPL40BYKR094C NQM1P53228 333 aaPredicted RBP0.79□□□□□ -2.28
RPL40BYKR094C CWC27Q02770 301 aa0.79□□□□□ -2.28
RPL40BYKR094C MZM1Q03429 123 aaPredicted RBP0.79□□□□□ -2.28
RPL40BYKR094C RIM9Q04734 239 aa0.79□□□□□ -2.28
RPL40BYKR094C UPS1Q05776 175 aa0.79□□□□□ -2.28
RPL40BYKR094C FIT2Q08906 153 aa0.79□□□□□ -2.28
RPL40BYKR094C DUR1,2P32528 1835 aaKnown RBP0.79□□□□□ -2.28
RPL40BYKR094C SEN2P16658 377 aa0.78□□□□□ -2.28
RPL40BYKR094C UPS2P35200 230 aa0.78□□□□□ -2.28
RPL40BYKR094C CCS1P40202 249 aaKnown RBP0.78□□□□□ -2.28
RPL40BYKR094C YGR269WP40326 108 aa0.78□□□□□ -2.28
RPL40BYKR094C LSM1P47017 172 aaKnown RBP0.78□□□□□ -2.28
RPL40BYKR094C YJR015WP47090 510 aa0.78□□□□□ -2.28
RPL40BYKR094C CCC1P47818 322 aa0.78□□□□□ -2.28
RPL40BYKR094C GEP7P53171 287 aa0.78□□□□□ -2.28
RPL40BYKR094C ORM1P53224 222 aa0.78□□□□□ -2.28
RPL40BYKR094C YNR064CP53750 290 aa0.78□□□□□ -2.28
RPL40BYKR094C YHP1Q04116 353 aa0.78□□□□□ -2.28
RPL40BYKR094C RRT7Q07829 113 aa0.78□□□□□ -2.28
RPL40BYKR094C YOR381W-AQ3E804 55 aa0.78□□□□□ -2.28
RPL40BYKR094C ACC1Q00955 2233 aaKnown RBP0.78□□□□□ -2.28
RPL40BYKR094C TAF2P23255 1407 aa0.78□□□□□ -2.28
RPL40BYKR094C YGL041W-AP0C5N3 154 aa0.77□□□□□ -2.29
RPL40BYKR094C PRE1P22141 198 aaKnown RBP0.77□□□□□ -2.29
RPL40BYKR094C MAK31P23059 88 aa0.77□□□□□ -2.29
RPL40BYKR094C YBL010CP32788 280 aa0.77□□□□□ -2.29
RPL40BYKR094C YEL067CP39978 195 aa0.77□□□□□ -2.29
RPL40BYKR094C CIN5P40917 295 aa0.77□□□□□ -2.29
RPL40BYKR094C FIP1P45976 327 aa0.77□□□□□ -2.29
RPL40BYKR094C YAE1P47118 141 aaPredicted RBP0.77□□□□□ -2.29
RPL40BYKR094C MOG1P47123 218 aa0.77□□□□□ -2.29
RPL40BYKR094C PAC10P48363 199 aa0.77□□□□□ -2.29
RPL40BYKR094C ATP19P81451 68 aa0.77□□□□□ -2.29
RPL40BYKR094C UBC7Q02159 165 aa0.77□□□□□ -2.29
RPL40BYKR094C ATG10Q07879 167 aa0.77□□□□□ -2.29
RPL40BYKR094C ADE6P38972 1358 aaKnown RBP0.77□□□□□ -2.29
RPL40BYKR094C SPS2P08459 502 aa0.76□□□□□ -2.29
RPL40BYKR094C RPS25BP0C0T4 108 aaKnown RBP0.76□□□□□ -2.29
RPL40BYKR094C PHO13P19881 312 aa0.76□□□□□ -2.29
RPL40BYKR094C UBC8P28263 218 aa0.76□□□□□ -2.29
RPL40BYKR094C YPT31P38555 223 aaKnown RBP0.76□□□□□ -2.29
RPL40BYKR094C YHL042WP38729 150 aa0.76□□□□□ -2.29
RPL40BYKR094C IPI1P38803 334 aaPredicted RBP0.76□□□□□ -2.29
RPL40BYKR094C YER181CP40097 107 aa0.76□□□□□ -2.29
RPL40BYKR094C HHO1P53551 258 aa0.76□□□□□ -2.29
RPL40BYKR094C YDR366CP87287 132 aa0.76□□□□□ -2.29
RPL40BYKR094C RPS25AQ3E792 108 aaPredicted RBP0.76□□□□□ -2.29
RPL40BYKR094C UBR1P19812 1950 aa0.76□□□□□ -2.29
RPL40BYKR094C YCL042WP25572 119 aa0.75□□□□□ -2.29
RPL40BYKR094C AHT1P29589 182 aa0.75□□□□□ -2.29
RPL40BYKR094C GIM4P40005 111 aaKnown RBP0.75□□□□□ -2.29
RPL40BYKR094C MPM1P40364 252 aa0.75□□□□□ -2.29
RPL40BYKR094C GPI2P46961 280 aa0.75□□□□□ -2.29
RPL40BYKR094C RBL2P48606 106 aaKnown RBP0.75□□□□□ -2.29
RPL40BYKR094C YDR102CQ03864 110 aa0.75□□□□□ -2.29
RPL40BYKR094C ELP6Q04868 273 aa0.75□□□□□ -2.29
RPL40BYKR094C YPR114WQ06107 315 aa0.75□□□□□ -2.29
RPL40BYKR094C KEI1Q06346 221 aa0.75□□□□□ -2.29
RPL40BYKR094C PST2Q12335 198 aaKnown RBP0.75□□□□□ -2.29
RPL40BYKR094C RIF1P29539 1916 aa0.75□□□□□ -2.29
RPL40BYKR094C SRP21P32342 167 aa0.74□□□□□ -2.29
RPL40BYKR094C SUI1P32911 108 aaKnown RBP0.74□□□□□ -2.29
RPL40BYKR094C MRPL24P36525 258 aaPredicted RBP0.74□□□□□ -2.29
RPL40BYKR094C ECM31P38122 312 aa0.74□□□□□ -2.29
RPL40BYKR094C YJL218WP40892 196 aaKnown RBP0.74□□□□□ -2.29
RPL40BYKR094C YGR201CP42936 225 aa0.74□□□□□ -2.29
RPL40BYKR094C YGR039WP53225 103 aa0.74□□□□□ -2.29
RPL40BYKR094C YDC1Q02896 317 aa0.74□□□□□ -2.29
RPL40BYKR094C EST3Q03096 181 aa0.74□□□□□ -2.29
RPL40BYKR094C FMN1Q03778 218 aa0.74□□□□□ -2.29
RPL40BYKR094C YMR252CQ04814 134 aa0.74□□□□□ -2.29
RPL40BYKR094C NMA1Q06178 401 aaKnown RBP0.74□□□□□ -2.29
RPL40BYKR094C INO4P13902 151 aa0.73□□□□□ -2.29
RPL40BYKR094C HSP12P22943 109 aaKnown RBP0.73□□□□□ -2.29
RPL40BYKR094C RPC19P28000 142 aaKnown RBP0.73□□□□□ -2.29
RPL40BYKR094C SHB17P36136 271 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms