RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	THI74	Q04083	370 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	GRH1	Q04410	372 aa	Known RBP	4.17	□□□□□ -1.74
DOA1	YKL213C	API2	Q04413	109 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	CTR3	Q06686	241 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	PEX27	Q08580	376 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	SUS1	Q6WNK7	96 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	CDC39	P25655	2108 aa	Known RBP	4.17	□□□□□ -1.74
DOA1	YKL213C	RAD6	P06104	172 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	SPS18	P32572	300 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	TOA2	P32774	122 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	ZRT3	P34240	503 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	TMA19	P35691	167 aa	Known RBP	4.16	□□□□□ -1.74
DOA1	YKL213C	PEX7	P39108	375 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	YGL230C	P53074	147 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	AAH1	P53909	347 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	ARC18	Q05933	178 aa	Known RBP	4.16	□□□□□ -1.74
DOA1	YKL213C	ORT1	Q12375	292 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	YLL053C	P0CD98	152 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	ERG24	P32462	438 aa	Known RBP	4.16	□□□□□ -1.74
DOA1	YKL213C	SHB17	P36136	271 aa	Known RBP	4.16	□□□□□ -1.74
DOA1	YKL213C	YHL037C	P38733	133 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	CTK2	P46962	323 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	SIP18	P50263	79 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	APJ1	P53940	528 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	YIL134C-A	Q45U18	67 aa		4.16	□□□□□ -1.74
DOA1	YKL213C	MRPL28	P36527	147 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	PRE5	P40302	234 aa	Known RBP	4.15	□□□□□ -1.74
DOA1	YKL213C	YFL051C	P43552	160 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	TAX4	P47030	604 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	SCW10	Q04951	389 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	ERP1	Q05359	219 aa	Known RBP	4.15	□□□□□ -1.74
DOA1	YKL213C	FIT3	Q08907	204 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	ATG41	Q12048	136 aa		4.15	□□□□□ -1.74
DOA1	YKL213C	CNE1	P27825	502 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	RTG1	P32607	177 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	POP8	P38208	133 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	AVT7	P40501	490 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	MCM22	P47167	239 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	SBH1	P52870	82 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	HSK3	P69852	69 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	ENV7	Q12003	364 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	KTI11	Q3E840	82 aa		4.15	□□□□□ -1.75
DOA1	YKL213C	YLR415C	O13578	112 aa		4.14	□□□□□ -1.75
DOA1	YKL213C	RAD52	P06778	471 aa	Known RBP	4.14	□□□□□ -1.75
DOA1	YKL213C	SEC4	P07560	215 aa	Known RBP	4.14	□□□□□ -1.75
DOA1	YKL213C	YCR007C	P25354	239 aa		4.14	□□□□□ -1.75
DOA1	YKL213C	ATG8	P38182	117 aa	RIP-Chip data	4.14	□□□□□ -1.75	not detected
DOA1	YKL213C	FMP41	P53889	259 aa	Known RBP	4.14	□□□□□ -1.75
DOA1	YKL213C	HEM25	Q07534	307 aa		4.14	□□□□□ -1.75
DOA1	YKL213C	ADH3	P07246	375 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	UBC5	P15732	148 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	TIP1	P27654	210 aa	Predicted RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	MLF3	P32047	452 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	CLB6	P32943	380 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	MRPL11	P36521	249 aa	Predicted RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	MIT1	P40002	666 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	BUD8	P41698	603 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	OST2	P46964	130 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	GON7	P46984	123 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	LCB3	P47013	409 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	ERG25	P53045	309 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	ERV29	P53337	310 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	NAT3	Q06504	195 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	CSI2	Q08054	341 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	RNH203	Q12338	110 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	HUT1	Q12520	339 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	YNR034W-A	Q3E841	98 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	UTP20	P35194	2493 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	SPS100	P13130	326 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	RPL30	P14120	105 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	YKL187C	P34231	750 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	GEP4	P38812	185 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	YEA4	P40004	342 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	FLX1	P40464	311 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	YIL059C	P40520	121 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	TAD2	P47058	250 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	SCW4	P53334	386 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	RNH201	P53942	307 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	UTP15	Q04305	513 aa	Known RBP	4.13	□□□□□ -1.75
DOA1	YKL213C	FCY1	Q12178	158 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	BOL1	Q3E793	110 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	VMA9	Q3E7B6	73 aa		4.13	□□□□□ -1.75
DOA1	YKL213C	FMP49	A0A023PZB3	126 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	INO4	P13902	151 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	RPB3	P16370	318 aa	Known RBP	4.12	□□□□□ -1.75
DOA1	YKL213C	POP5	P28005	173 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	HTD2	P38790	280 aa	Known RBP	4.12	□□□□□ -1.75
DOA1	YKL213C	ECM14	P38836	430 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	PEX22	P39718	180 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	SYS1	P41544	203 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	OST3	P48439	350 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	UBC13	P52490	153 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	THG1	P53215	237 aa	Known RBP	4.12	□□□□□ -1.75
DOA1	YKL213C	YGR039W	P53225	103 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	CYT2	Q00873	224 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	AAC1	P04710	309 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	ERS1	P17261	260 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	GLC7	P32598	312 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms