RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W MAK5P38112 773 aaPredicted RBP1.56□□□□□ -2.16
CAP1YKL007W UMP1P38293 148 aa1.56□□□□□ -2.16
CAP1YKL007W ERV15P38312 142 aa1.56□□□□□ -2.16
CAP1YKL007W AIM2P39721 246 aa1.56□□□□□ -2.16
CAP1YKL007W MTW1P39731 289 aa1.56□□□□□ -2.16
CAP1YKL007W YER137CP40083 148 aaKnown RBP1.56□□□□□ -2.16
CAP1YKL007W PGD1P40356 397 aa1.56□□□□□ -2.16
CAP1YKL007W POG1P40473 351 aa1.56□□□□□ -2.16
CAP1YKL007W ICE2P40499 491 aa1.56□□□□□ -2.16
CAP1YKL007W PRM10P42946 383 aa1.56□□□□□ -2.16
CAP1YKL007W LSM3P57743 89 aaKnown RBP1.56□□□□□ -2.16
CAP1YKL007W CYT2Q00873 224 aa1.56□□□□□ -2.16
CAP1YKL007W GIM5Q04493 163 aa1.56□□□□□ -2.16
CAP1YKL007W SPC2Q04969 178 aa1.56□□□□□ -2.16
CAP1YKL007W GRX8Q05926 109 aa1.56□□□□□ -2.16
CAP1YKL007W YOL024WQ08172 172 aa1.56□□□□□ -2.16
CAP1YKL007W MCP1Q12106 302 aa1.56□□□□□ -2.16
CAP1YKL007W YDR524C-BQ3E6R4 66 aa1.56□□□□□ -2.16
CAP1YKL007W YHR214C-EQ8TGK0 99 aa1.56□□□□□ -2.16
CAP1YKL007W IGO2Q9P305 131 aa1.56□□□□□ -2.16
CAP1YKL007W TRA1P38811 3744 aa1.56□□□□□ -2.16
CAP1YKL007W TAO3P40468 2376 aa1.55□□□□□ -2.16
CAP1YKL007W CSF1Q12150 2958 aa1.55□□□□□ -2.16
CAP1YKL007W MBF1O14467 151 aaKnown RBP1.55□□□□□ -2.16
CAP1YKL007W TIM9O74700 87 aa1.55□□□□□ -2.16
CAP1YKL007W HAP2P06774 265 aa1.55□□□□□ -2.16
CAP1YKL007W TAH1P25638 111 aaPredicted RBP1.55□□□□□ -2.16
CAP1YKL007W TRR1P29509 319 aaKnown RBP1.55□□□□□ -2.16
CAP1YKL007W YBL010CP32788 280 aa1.55□□□□□ -2.16
CAP1YKL007W CPR5P35176 225 aa1.55□□□□□ -2.16
CAP1YKL007W YHR180WP38868 163 aa1.55□□□□□ -2.16
CAP1YKL007W CYC2P38909 366 aa1.55□□□□□ -2.16
CAP1YKL007W MPM1P40364 252 aa1.55□□□□□ -2.16
CAP1YKL007W BOL2P53082 120 aa1.55□□□□□ -2.16
CAP1YKL007W NRK1P53915 240 aa1.55□□□□□ -2.16
CAP1YKL007W TMA20P89886 181 aaPredicted RBP1.55□□□□□ -2.16
CAP1YKL007W PIR1Q03178 341 aa1.55□□□□□ -2.16
CAP1YKL007W GPI17Q04080 534 aa1.55□□□□□ -2.16
CAP1YKL007W HNT1Q04344 158 aaKnown RBP1.55□□□□□ -2.16
CAP1YKL007W NOC4Q06512 552 aaPredicted RBP1.55□□□□□ -2.16
CAP1YKL007W YOL131WQ08270 108 aa1.55□□□□□ -2.16
CAP1YKL007W YOL160WQ08321 113 aa1.55□□□□□ -2.16
CAP1YKL007W YLR046CQ12253 270 aa1.55□□□□□ -2.16
CAP1YKL007W SLH1P53327 1967 aaKnown RBP1.55□□□□□ -2.16
CAP1YKL007W IRA1P18963 3092 aa1.55□□□□□ -2.16
CAP1YKL007W YGL041W-AP0C5N3 154 aa1.54□□□□□ -2.16
CAP1YKL007W UBC8P28263 218 aa1.54□□□□□ -2.16
CAP1YKL007W ECM31P38122 312 aa1.54□□□□□ -2.16
CAP1YKL007W SVP26P38869 228 aa1.54□□□□□ -2.16
CAP1YKL007W AGE2P40529 298 aa1.54□□□□□ -2.16
CAP1YKL007W RPL33BP41056 107 aaKnown RBP1.54□□□□□ -2.16
CAP1YKL007W ERG10P41338 398 aaKnown RBP1.54□□□□□ -2.16
CAP1YKL007W SKI6P46948 246 aaPredicted RBP1.54□□□□□ -2.16
CAP1YKL007W VMA10P48836 114 aaKnown RBP1.54□□□□□ -2.16
CAP1YKL007W YNL184CP53876 108 aa1.54□□□□□ -2.16
CAP1YKL007W BUD25P85052 153 aa1.54□□□□□ -2.16
CAP1YKL007W GRX5Q02784 150 aa1.54□□□□□ -2.16
CAP1YKL007W RRP17Q04031 235 aaPredicted RBP1.54□□□□□ -2.16
CAP1YKL007W GPI11Q06636 219 aa1.54□□□□□ -2.16
CAP1YKL007W PEX11Q12462 236 aa1.54□□□□□ -2.16
CAP1YKL007W YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
CAP1YKL007W DDI2P0CH63 225 aa1.53□□□□□ -2.16
CAP1YKL007W DDI3P0CH64 225 aa1.53□□□□□ -2.16
CAP1YKL007W STF2P16965 84 aa1.53□□□□□ -2.16
CAP1YKL007W PET9P18239 318 aaKnown RBP1.53□□□□□ -2.16
CAP1YKL007W IRA2P19158 3079 aa1.53□□□□□ -2.16
CAP1YKL007W TRX3P25372 127 aa1.53□□□□□ -2.16
CAP1YKL007W RPS1AP33442 255 aaKnown RBP1.53□□□□□ -2.16
CAP1YKL007W SHE2P36068 246 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
CAP1YKL007W SRP14P38985 146 aa1.53□□□□□ -2.16
CAP1YKL007W VMA7P39111 118 aa1.53□□□□□ -2.16
CAP1YKL007W YEL073CP39974 107 aa1.53□□□□□ -2.16
CAP1YKL007W LSM1P47017 172 aaKnown RBP1.53□□□□□ -2.16
CAP1YKL007W DIE2P50076 525 aa1.53□□□□□ -2.16
CAP1YKL007W UBC12P52491 188 aa1.53□□□□□ -2.16
CAP1YKL007W DOC1P53068 250 aa1.53□□□□□ -2.16
CAP1YKL007W EMC4P53073 190 aa1.53□□□□□ -2.16
CAP1YKL007W JAC1P53193 184 aa1.53□□□□□ -2.16
CAP1YKL007W YNR062CP53748 327 aa1.53□□□□□ -2.16
CAP1YKL007W SNO1Q03144 224 aa1.53□□□□□ -2.16
CAP1YKL007W HPT1Q04178 221 aaKnown RBP1.53□□□□□ -2.16
CAP1YKL007W YMR315WQ04869 349 aaKnown RBP1.53□□□□□ -2.16
CAP1YKL007W LDB18Q07887 179 aa1.53□□□□□ -2.16
CAP1YKL007W NSL1Q12143 216 aa1.53□□□□□ -2.16
CAP1YKL007W RTR2Q12378 196 aa1.53□□□□□ -2.16
CAP1YKL007W YPR014CQ6B0W2 109 aa1.53□□□□□ -2.16
CAP1YKL007W CPA1P07258 411 aaKnown RBP1.52□□□□□ -2.17
CAP1YKL007W RPL35AP0CX84 120 aaKnown RBP1.52□□□□□ -2.17
CAP1YKL007W RPL35BP0CX85 120 aaKnown RBP1.52□□□□□ -2.17
CAP1YKL007W PEX34P25584 144 aa1.52□□□□□ -2.17
CAP1YKL007W YCR101CP25607 182 aa1.52□□□□□ -2.17
CAP1YKL007W OCH1P31755 480 aa1.52□□□□□ -2.17
CAP1YKL007W CLG1P35190 452 aa1.52□□□□□ -2.17
CAP1YKL007W YKR045CP36138 183 aa1.52□□□□□ -2.17
CAP1YKL007W POP7P38291 140 aa1.52□□□□□ -2.17
CAP1YKL007W IPT1P38954 527 aa1.52□□□□□ -2.17
CAP1YKL007W RGI1P40043 161 aaPredicted RBP1.52□□□□□ -2.17
CAP1YKL007W TIR3P40552 269 aa1.52□□□□□ -2.17
CAP1YKL007W LSM8P47093 109 aaKnown RBP1.52□□□□□ -2.17
CAP1YKL007W ARP3P47117 449 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms