RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YML079WQ03629 201 aa0.85□□□□□ -2.27
CUP1-2YHR055C GLR1P41921 483 aaKnown RBP0.84□□□□□ -2.27
CUP1-2YHR055C TMA23Q03525 211 aa0.84□□□□□ -2.27
CUP1-2YHR055C AVO2Q04749 426 aa0.84□□□□□ -2.27
CUP1-2YHR055C TRM3Q07527 1436 aa0.83□□□□□ -2.28
CUP1-2YHR055C YEL073CP39974 107 aa0.83□□□□□ -2.28
CUP1-2YHR055C XPT1P47165 209 aa0.83□□□□□ -2.28
CUP1-2YHR055C PAC10P48363 199 aa0.83□□□□□ -2.28
CUP1-2YHR055C FCY1Q12178 158 aa0.83□□□□□ -2.28
CUP1-2YHR055C ATP7P30902 174 aa0.82□□□□□ -2.28
CUP1-2YHR055C CLG1P35190 452 aa0.82□□□□□ -2.28
CUP1-2YHR055C YGR269WP40326 108 aa0.82□□□□□ -2.28
CUP1-2YHR055C POG1P40473 351 aa0.82□□□□□ -2.28
CUP1-2YHR055C PEX11Q12462 236 aa0.82□□□□□ -2.28
CUP1-2YHR055C NUF2P33895 451 aa0.81□□□□□ -2.28
CUP1-2YHR055C NQM1P53228 333 aaPredicted RBP0.81□□□□□ -2.28
CUP1-2YHR055C PRP8P33334 2413 aaKnown RBP0.81□□□□□ -2.28
CUP1-2YHR055C YCR001WP25347 104 aa0.8□□□□□ -2.28
CUP1-2YHR055C TRR1P29509 319 aaKnown RBP0.8□□□□□ -2.28
CUP1-2YHR055C SOL1P50278 321 aa0.8□□□□□ -2.28
CUP1-2YHR055C PLP1Q04004 230 aa0.8□□□□□ -2.28
CUP1-2YHR055C RPS25BP0C0T4 108 aaKnown RBP0.79□□□□□ -2.28
CUP1-2YHR055C RPS25AQ3E792 108 aaPredicted RBP0.79□□□□□ -2.28
CUP1-2YHR055C KIN28P06242 306 aa0.78□□□□□ -2.28
CUP1-2YHR055C CIN5P40917 295 aa0.78□□□□□ -2.28
CUP1-2YHR055C APS3P47064 194 aa0.78□□□□□ -2.28
CUP1-2YHR055C GEP7P53171 287 aa0.78□□□□□ -2.28
CUP1-2YHR055C GIM3P53900 129 aa0.78□□□□□ -2.28
CUP1-2YHR055C SYM1Q06563 197 aa0.78□□□□□ -2.28
CUP1-2YHR055C SPS2P08459 502 aa0.77□□□□□ -2.29
CUP1-2YHR055C YOL013W-AP0C272 63 aaPredicted RBP0.77□□□□□ -2.29
CUP1-2YHR055C SEC72P39742 193 aaKnown RBP0.77□□□□□ -2.29
CUP1-2YHR055C YEL028WP39989 153 aa0.77□□□□□ -2.29
CUP1-2YHR055C LIP1Q03579 150 aa0.77□□□□□ -2.29
CUP1-2YHR055C UIP4Q08926 304 aa0.77□□□□□ -2.29
CUP1-2YHR055C TAF2P23255 1407 aa0.76□□□□□ -2.29
CUP1-2YHR055C VAM10Q08474 114 aa0.76□□□□□ -2.29
CUP1-2YHR055C YHR213W-BQ8TGK1 99 aa0.75□□□□□ -2.29
CUP1-2YHR055C YLR050CQ12155 161 aaKnown RBP0.73□□□□□ -2.29
CUP1-2YHR055C UBC6P33296 250 aaPredicted RBP0.72□□□□□ -2.29
CUP1-2YHR055C PTC1P35182 281 aa0.72□□□□□ -2.29
CUP1-2YHR055C CSH1P38287 376 aa0.72□□□□□ -2.29
CUP1-2YHR055C GRX3Q03835 250 aa0.72□□□□□ -2.29
CUP1-2YHR055C GRE1Q08969 168 aa0.72□□□□□ -2.29
CUP1-2YHR055C SRP14P38985 146 aa0.71□□□□□ -2.3
CUP1-2YHR055C SED1Q01589 338 aa0.71□□□□□ -2.3
CUP1-2YHR055C THI74Q04083 370 aa0.71□□□□□ -2.3
CUP1-2YHR055C ATG10Q07879 167 aa0.71□□□□□ -2.3
CUP1-2YHR055C CMD1P06787 147 aaKnown RBP0.7□□□□□ -2.3
CUP1-2YHR055C INO4P13902 151 aa0.7□□□□□ -2.3
CUP1-2YHR055C RAD51P25454 400 aa0.7□□□□□ -2.3
CUP1-2YHR055C SPT14P32363 452 aa0.7□□□□□ -2.3
CUP1-2YHR055C SRP102P36057 244 aaPredicted RBP0.7□□□□□ -2.3
CUP1-2YHR055C YBR027CP38220 110 aa0.7□□□□□ -2.3
CUP1-2YHR055C HHY1P39982 102 aa0.7□□□□□ -2.3
CUP1-2YHR055C YIP3P53633 176 aa0.69□□□□□ -2.3
CUP1-2YHR055C YEL014CP39999 101 aa0.68□□□□□ -2.3
CUP1-2YHR055C YNL122CP53921 115 aaPredicted RBP0.68□□□□□ -2.3
CUP1-2YHR055C TMA20P89886 181 aaPredicted RBP0.68□□□□□ -2.3
CUP1-2YHR055C YDL241WQ07738 123 aa0.68□□□□□ -2.3
CUP1-2YHR055C YOR072WQ08486 104 aa0.68□□□□□ -2.3
CUP1-2YHR055C ECM31P38122 312 aa0.67□□□□□ -2.3
CUP1-2YHR055C YPT31P38555 223 aaKnown RBP0.67□□□□□ -2.3
CUP1-2YHR055C EGD2P38879 174 aaKnown RBP0.67□□□□□ -2.3
CUP1-2YHR055C GLC8P41818 229 aa0.67□□□□□ -2.3
CUP1-2YHR055C YNL140CP53910 189 aa0.67□□□□□ -2.3
CUP1-2YHR055C YPR114WQ06107 315 aa0.67□□□□□ -2.3
CUP1-2YHR055C PRM3Q08931 133 aa0.67□□□□□ -2.3
CUP1-2YHR055C YNR064CP53750 290 aa0.66□□□□□ -2.3
CUP1-2YHR055C ADE6P38972 1358 aaKnown RBP0.66□□□□□ -2.3
CUP1-2YHR055C CCC1P47818 322 aa0.65□□□□□ -2.31
CUP1-2YHR055C HSK3P69852 69 aa0.64□□□□□ -2.31
CUP1-2YHR055C MGR2Q02889 113 aa0.64□□□□□ -2.31
CUP1-2YHR055C CMC4Q3E7A9 73 aa0.64□□□□□ -2.31
CUP1-2YHR055C ROM2P51862 1356 aaKnown RBP0.64□□□□□ -2.31
CUP1-2YHR055C SPA2P23201 1466 aaKnown RBP0.63□□□□□ -2.31
CUP1-2YHR055C HAP2P06774 265 aa0.63□□□□□ -2.31
CUP1-2YHR055C RPS22AP0C0W1 130 aaKnown RBP0.63□□□□□ -2.31
CUP1-2YHR055C HYP2P23301 157 aaKnown RBP0.63□□□□□ -2.31
CUP1-2YHR055C HSP150P32478 413 aa0.63□□□□□ -2.31
CUP1-2YHR055C YLR046CQ12253 270 aa0.63□□□□□ -2.31
CUP1-2YHR055C RPS22BQ3E7Y3 130 aaKnown RBP0.63□□□□□ -2.31
CUP1-2YHR055C YDR102CQ03864 110 aa0.62□□□□□ -2.31
CUP1-2YHR055C ATP5P09457 212 aa0.61□□□□□ -2.31
CUP1-2YHR055C ATG38Q05789 226 aaKnown RBP0.61□□□□□ -2.31
CUP1-2YHR055C NMA1Q06178 401 aaKnown RBP0.61□□□□□ -2.31
CUP1-2YHR055C CDC39P25655 2108 aaKnown RBP0.61□□□□□ -2.31
CUP1-2YHR055C YGL041W-AP0C5N3 154 aa0.6□□□□□ -2.31
CUP1-2YHR055C HTD2P38790 280 aaKnown RBP0.6□□□□□ -2.31
CUP1-2YHR055C YGL101WP53144 215 aa0.6□□□□□ -2.31
CUP1-2YHR055C ATG8P38182 117 aaRIP-Chip data0.58□□□□□ -2.32not detected
CUP1-2YHR055C FMN1Q03778 218 aa0.58□□□□□ -2.32
CUP1-2YHR055C RPL35AP0CX84 120 aaKnown RBP0.57□□□□□ -2.32
CUP1-2YHR055C RPL35BP0CX85 120 aaKnown RBP0.57□□□□□ -2.32
CUP1-2YHR055C IPT1P38954 527 aa0.57□□□□□ -2.32
CUP1-2YHR055C YMR141CP40211 102 aa0.57□□□□□ -2.32
CUP1-2YHR055C RCF2P53721 224 aa0.56□□□□□ -2.32
CUP1-2YHR055C LSM3P57743 89 aaKnown RBP0.56□□□□□ -2.32
CUP1-2YHR055C YDR476CQ03362 224 aa0.56□□□□□ -2.32
CUP1-2YHR055C HSL1P34244 1518 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms