RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	TIM13	P53299	105 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	SNO1	Q03144	224 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	HPT1	Q04178	221 aa	Known RBP	0.32	□□□□□ -2.36
SPO11	YHL022C	YPR127W	Q06494	345 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	YDL157C	Q12082	118 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	YOR214C	Q12282	236 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	TAF2	P23255	1407 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	RAD6	P06104	172 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	APA2	P22108	325 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	TRR1	P29509	319 aa	Known RBP	0.31	□□□□□ -2.36
SPO11	YHL022C	FYV4	P38783	130 aa	Predicted RBP	0.31	□□□□□ -2.36
SPO11	YHL022C	GLR1	P41921	483 aa	Known RBP	0.31	□□□□□ -2.36
SPO11	YHL022C	APS3	P47064	194 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	JAC1	P53193	184 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	YML079W	Q03629	201 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	AVO2	Q04749	426 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	PEX11	Q12462	236 aa		0.31	□□□□□ -2.36
SPO11	YHL022C	SPA2	P23201	1466 aa	Known RBP	0.3	□□□□□ -2.36
SPO11	YHL022C	NUF2	P33895	451 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	CLG1	P35190	452 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	YKR041W	P36134	250 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	YGR269W	P40326	108 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	PAC10	P48363	199 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	NQM1	P53228	333 aa	Predicted RBP	0.3	□□□□□ -2.36
SPO11	YHL022C	GIM3	P53900	129 aa		0.3	□□□□□ -2.36
SPO11	YHL022C	HSL1	P34244	1518 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	ATP7	P30902	174 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	PTC1	P35182	281 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	SEC72	P39742	193 aa	Known RBP	0.29	□□□□□ -2.36
SPO11	YHL022C	XPT1	P47165	209 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	TTI2	P47168	421 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	SOL1	P50278	321 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	GEP7	P53171	287 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	PLP1	Q04004	230 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	SYM1	Q06563	197 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	VAM10	Q08474	114 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	UIP4	Q08926	304 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	GRE1	Q08969	168 aa		0.29	□□□□□ -2.36
SPO11	YHL022C	LAA1	P39526	2014 aa		0.28	□□□□□ -2.36
SPO11	YHL022C	UBC6	P33296	250 aa	Predicted RBP	0.28	□□□□□ -2.36
SPO11	YHL022C	SRP14	P38985	146 aa		0.28	□□□□□ -2.36
SPO11	YHL022C	YEL073C	P39974	107 aa		0.28	□□□□□ -2.36
SPO11	YHL022C	YNL200C	P40165	246 aa	Known RBP	0.28	□□□□□ -2.36
SPO11	YHL022C	CIN5	P40917	295 aa		0.28	□□□□□ -2.36
SPO11	YHL022C	LIP1	Q03579	150 aa		0.28	□□□□□ -2.36
SPO11	YHL022C	CMD1	P06787	147 aa	Known RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	SPS2	P08459	502 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	RPS25B	P0C0T4	108 aa	Known RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	RAD51	P25454	400 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	CPR5	P35176	225 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	SRP102	P36057	244 aa	Predicted RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	ECM31	P38122	312 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	YEL028W	P39989	153 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	TMA20	P89886	181 aa	Predicted RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	YLR050C	Q12155	161 aa	Known RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	RPS25A	Q3E792	108 aa	Predicted RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	ADE6	P38972	1358 aa	Known RBP	0.27	□□□□□ -2.37
SPO11	YHL022C	GSC2	P40989	1895 aa		0.27	□□□□□ -2.37
SPO11	YHL022C	YNR064C	P53750	290 aa		0.26	□□□□□ -2.37
SPO11	YHL022C	YNL140C	P53910	189 aa		0.26	□□□□□ -2.37
SPO11	YHL022C	THI74	Q04083	370 aa		0.26	□□□□□ -2.37
SPO11	YHL022C	YOR072W	Q08486	104 aa		0.26	□□□□□ -2.37
SPO11	YHL022C	INO4	P13902	151 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	SPT14	P32363	452 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	CSH1	P38287	376 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	EGD2	P38879	174 aa	Known RBP	0.25	□□□□□ -2.37
SPO11	YHL022C	YEL014C	P39999	101 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	YIP3	P53633	176 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	YNL122C	P53921	115 aa	Predicted RBP	0.25	□□□□□ -2.37
SPO11	YHL022C	ATG10	Q07879	167 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	YLR046C	Q12253	270 aa		0.25	□□□□□ -2.37
SPO11	YHL022C	CHD1	P32657	1468 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	YGL041W-A	P0C5N3	154 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	HYP2	P23301	157 aa	Known RBP	0.24	□□□□□ -2.37
SPO11	YHL022C	HSK3	P69852	69 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	GRX3	Q03835	250 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	ATG38	Q05789	226 aa	Known RBP	0.24	□□□□□ -2.37
SPO11	YHL022C	YPR114W	Q06107	315 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	YDL241W	Q07738	123 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	YRF1-3	P0CX14	1859 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	YRF1-7	P0CX15	1859 aa		0.24	□□□□□ -2.37
SPO11	YHL022C	SAC3	P46674	1301 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	HAP2	P06774	265 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	ATP5	P09457	212 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	RPS22A	P0C0W1	130 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	RPL35A	P0CX84	120 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	RPL35B	P0CX85	120 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	VPS51	P36116	164 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	YBR027C	P38220	110 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	YPT31	P38555	223 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	GLC8	P41818	229 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	LSM3	P57743	89 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	MGR2	Q02889	113 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	YDR476C	Q03362	224 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	MAK3	Q03503	176 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	FMN1	Q03778	218 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	NMA1	Q06178	401 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	CMC4	Q3E7A9	73 aa		0.23	□□□□□ -2.37
SPO11	YHL022C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.23	□□□□□ -2.37
SPO11	YHL022C	BLM10	P43583	2143 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms