RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene KXD1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KXD1YGL079W SPT14P32363 452 aa2.38□□□□□ -2.03
KXD1YGL079W YEL073CP39974 107 aa2.38□□□□□ -2.03
KXD1YGL079W RIO2P40160 425 aaKnown RBP2.38□□□□□ -2.03
KXD1YGL079W YJL218WP40892 196 aaKnown RBP2.38□□□□□ -2.03
KXD1YGL079W YNL033WP53964 284 aa2.38□□□□□ -2.03
KXD1YGL079W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
KXD1YGL079W IRC23Q08416 157 aa2.38□□□□□ -2.03
KXD1YGL079W FCY1Q12178 158 aa2.38□□□□□ -2.03
KXD1YGL079W Q0144Q9ZZW2 109 aa2.38□□□□□ -2.03
KXD1YGL079W YLR236CA0A023PZG4 107 aa2.37□□□□□ -2.03
KXD1YGL079W PEX4P29340 183 aa2.37□□□□□ -2.03
KXD1YGL079W CLB6P32943 380 aa2.37□□□□□ -2.03
KXD1YGL079W YRA2P36036 203 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
KXD1YGL079W PHO88P38264 188 aaPredicted RBP2.37□□□□□ -2.03
KXD1YGL079W SVP26P38869 228 aa2.37□□□□□ -2.03
KXD1YGL079W YNL019CP53975 284 aa2.37□□□□□ -2.03
KXD1YGL079W DAD3P69850 94 aa2.37□□□□□ -2.03
KXD1YGL079W CUE4Q04201 117 aaPredicted RBP2.37□□□□□ -2.03
KXD1YGL079W RDS3Q06835 107 aaPredicted RBP2.37□□□□□ -2.03
KXD1YGL079W SPC3Q12133 184 aa2.37□□□□□ -2.03
KXD1YGL079W RPO41P13433 1351 aaKnown RBP2.36□□□□□ -2.03
KXD1YGL079W HSP12P22943 109 aaKnown RBP2.36□□□□□ -2.03
KXD1YGL079W MRP49P32388 137 aa2.36□□□□□ -2.03
KXD1YGL079W RPS1AP33442 255 aaKnown RBP2.36□□□□□ -2.03
KXD1YGL079W VMA7P39111 118 aa2.36□□□□□ -2.03
KXD1YGL079W YER137CP40083 148 aaKnown RBP2.36□□□□□ -2.03
KXD1YGL079W YGR017WP53210 297 aa2.36□□□□□ -2.03
KXD1YGL079W LIP1Q03579 150 aa2.36□□□□□ -2.03
KXD1YGL079W PRP11Q07350 266 aaPredicted RBP2.36□□□□□ -2.03
KXD1YGL079W VPS68Q12016 184 aa2.36□□□□□ -2.03
KXD1YGL079W EMC6Q12431 108 aa2.36□□□□□ -2.03
KXD1YGL079W YOR381W-AQ3E804 55 aa2.36□□□□□ -2.03
KXD1YGL079W TOP2P06786 1428 aaKnown RBP2.35□□□□□ -2.03
KXD1YGL079W FMP49A0A023PZB3 126 aa2.35□□□□□ -2.03
KXD1YGL079W KIN28P06242 306 aa2.35□□□□□ -2.03
KXD1YGL079W GPA2P10823 449 aa2.35□□□□□ -2.03
KXD1YGL079W AHT1P29589 182 aa2.35□□□□□ -2.03
KXD1YGL079W SUI1P32911 108 aaKnown RBP2.35□□□□□ -2.03
KXD1YGL079W YJL027CP47063 138 aaPredicted RBP2.35□□□□□ -2.03
KXD1YGL079W PAC10P48363 199 aa2.35□□□□□ -2.03
KXD1YGL079W YNR064CP53750 290 aa2.35□□□□□ -2.03
KXD1YGL079W EST3Q03096 181 aa2.35□□□□□ -2.03
KXD1YGL079W RRT7Q07829 113 aa2.35□□□□□ -2.03
KXD1YGL079W ATG10Q07879 167 aa2.35□□□□□ -2.03
KXD1YGL079W YOR015WQ12169 119 aa2.35□□□□□ -2.03
KXD1YGL079W YNL277W-AQ3E7Z0 62 aa2.35□□□□□ -2.03
KXD1YGL079W DDR48P18899 430 aaKnown RBP2.34□□□□□ -2.03
KXD1YGL079W YOR062CP36025 268 aa2.34□□□□□ -2.03
KXD1YGL079W YBR242WP38331 238 aa2.34□□□□□ -2.03
KXD1YGL079W YHR140WP38842 239 aa2.34□□□□□ -2.03
KXD1YGL079W RGI1P40043 161 aaPredicted RBP2.34□□□□□ -2.03
KXD1YGL079W ERG25P53045 309 aa2.34□□□□□ -2.03
KXD1YGL079W RAD28Q12021 506 aa2.34□□□□□ -2.03
KXD1YGL079W YPR013CQ12145 317 aa2.34□□□□□ -2.03
KXD1YGL079W SSN2P38931 1420 aa2.34□□□□□ -2.04
KXD1YGL079W TFC1P32367 649 aa2.33□□□□□ -2.04
KXD1YGL079W HYM1P32464 399 aa2.33□□□□□ -2.04
KXD1YGL079W YPT31P38555 223 aaKnown RBP2.33□□□□□ -2.04
KXD1YGL079W AYR1P40471 297 aa2.33□□□□□ -2.04
KXD1YGL079W RGM1Q00453 211 aa2.33□□□□□ -2.04
KXD1YGL079W CWC27Q02770 301 aa2.33□□□□□ -2.04
KXD1YGL079W DML1Q03652 475 aa2.33□□□□□ -2.04
KXD1YGL079W RIM9Q04734 239 aa2.33□□□□□ -2.04
KXD1YGL079W YPR114WQ06107 315 aa2.33□□□□□ -2.04
KXD1YGL079W ANT1Q06497 328 aa2.33□□□□□ -2.04
KXD1YGL079W FYV7Q12247 151 aa2.33□□□□□ -2.04
KXD1YGL079W SNT2P53127 1403 aa2.33□□□□□ -2.04
KXD1YGL079W YOL162WP0CF19 215 aa2.32□□□□□ -2.04
KXD1YGL079W NMT1P14743 455 aa2.32□□□□□ -2.04
KXD1YGL079W SEC11P15367 167 aa2.32□□□□□ -2.04
KXD1YGL079W RPS1BP23248 255 aaKnown RBP2.32□□□□□ -2.04
KXD1YGL079W MRS4P23500 304 aa2.32□□□□□ -2.04
KXD1YGL079W YHR022CP38763 256 aa2.32□□□□□ -2.04
KXD1YGL079W GAA1P39012 614 aa2.32□□□□□ -2.04
KXD1YGL079W GEP7P53171 287 aa2.32□□□□□ -2.04
KXD1YGL079W SAY1P53324 424 aa2.32□□□□□ -2.04
KXD1YGL079W POP3P53833 195 aaPredicted RBP2.32□□□□□ -2.04
KXD1YGL079W BUD25P85052 153 aa2.32□□□□□ -2.04
KXD1YGL079W APS2Q00381 147 aa2.32□□□□□ -2.04
KXD1YGL079W PIR1Q03178 341 aa2.32□□□□□ -2.04
KXD1YGL079W RNH202Q05635 350 aa2.32□□□□□ -2.04
KXD1YGL079W YPR174CQ06616 221 aaPredicted RBP2.32□□□□□ -2.04
KXD1YGL079W UIP4Q08926 304 aa2.32□□□□□ -2.04
KXD1YGL079W BOL1Q3E793 110 aa2.32□□□□□ -2.04
KXD1YGL079W YOR304C-AO14468 76 aa2.31□□□□□ -2.04
KXD1YGL079W GSP2P32836 220 aaKnown RBP2.31□□□□□ -2.04
KXD1YGL079W RPL14AP36105 138 aaKnown RBP2.31□□□□□ -2.04
KXD1YGL079W RPL14BP38754 138 aaKnown RBP2.31□□□□□ -2.04
KXD1YGL079W KNH1P50112 268 aa2.31□□□□□ -2.04
KXD1YGL079W EMC4P53073 190 aa2.31□□□□□ -2.04
KXD1YGL079W DAD4P69851 72 aa2.31□□□□□ -2.04
KXD1YGL079W CYT2Q00873 224 aa2.31□□□□□ -2.04
KXD1YGL079W ARL3Q02804 198 aa2.31□□□□□ -2.04
KXD1YGL079W UPS3Q04006 179 aa2.31□□□□□ -2.04
KXD1YGL079W YIR021W-AQ3E739 70 aa2.31□□□□□ -2.04
KXD1YGL079W YLR099W-AQ3E798 87 aa2.31□□□□□ -2.04
KXD1YGL079W MET5P47169 1442 aa2.31□□□□□ -2.04
KXD1YGL079W DDI2P0CH63 225 aa2.3□□□□□ -2.04
KXD1YGL079W DDI3P0CH64 225 aa2.3□□□□□ -2.04
KXD1YGL079W MDH2P22133 377 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms