RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W YPL283W-BP0CX97 160 aa4.35□□□□□ -1.71
UBP9YER098W YPR204C-AP0CX98 160 aa4.35□□□□□ -1.71
UBP9YER098W TIR1P10863 254 aa4.35□□□□□ -1.71
UBP9YER098W YKL102CP34249 101 aa4.35□□□□□ -1.71
UBP9YER098W YMR166CQ03829 368 aa4.35□□□□□ -1.71
UBP9YER098W THI74Q04083 370 aa4.35□□□□□ -1.71
UBP9YER098W YMR090WQ04304 227 aaKnown RBP4.35□□□□□ -1.71
UBP9YER098W YLR012CQ07927 99 aa4.35□□□□□ -1.71
UBP9YER098W GAT3Q07928 141 aa4.35□□□□□ -1.71
UBP9YER098W CSR2Q12734 1121 aa4.35□□□□□ -1.71
UBP9YER098W DET1Q99288 334 aaKnown RBP4.35□□□□□ -1.71
UBP9YER098W AIM17P23180 465 aaKnown RBP4.35□□□□□ -1.71
UBP9YER098W SCO1P23833 295 aa4.35□□□□□ -1.71
UBP9YER098W HAC1P41546 238 aa4.35□□□□□ -1.71
UBP9YER098W COQ5P49017 307 aa4.35□□□□□ -1.71
UBP9YER098W ELC1Q03071 99 aa4.35□□□□□ -1.71
UBP9YER098W YPL162CQ12042 273 aa4.35□□□□□ -1.71
UBP9YER098W MCT1Q12283 360 aa4.35□□□□□ -1.71
UBP9YER098W SEC11P15367 167 aa4.34□□□□□ -1.71
UBP9YER098W STE18P18852 110 aa4.34□□□□□ -1.71
UBP9YER098W PAM17P36147 197 aa4.34□□□□□ -1.71
UBP9YER098W PRM5P40476 318 aa4.34□□□□□ -1.71
UBP9YER098W SCW4P53334 386 aaKnown RBP4.34□□□□□ -1.71
UBP9YER098W YMR254CQ04838 102 aa4.34□□□□□ -1.71
UBP9YER098W YPR114WQ06107 315 aa4.34□□□□□ -1.71
UBP9YER098W HRT1Q08273 121 aa4.34□□□□□ -1.71
UBP9YER098W ATO3Q12359 275 aa4.34□□□□□ -1.71
UBP9YER098W SPT15P13393 240 aaKnown RBP4.34□□□□□ -1.72
UBP9YER098W OCH1P31755 480 aa4.34□□□□□ -1.72
UBP9YER098W BAT1P38891 393 aaKnown RBP4.34□□□□□ -1.72
UBP9YER098W MSL1P40567 111 aaPredicted RBP4.34□□□□□ -1.72
UBP9YER098W YJR015WP47090 510 aa4.34□□□□□ -1.72
UBP9YER098W YGL230CP53074 147 aa4.34□□□□□ -1.72
UBP9YER098W PIR1Q03178 341 aa4.34□□□□□ -1.72
UBP9YER098W YPQ1Q12010 308 aa4.34□□□□□ -1.72
UBP9YER098W YDL211CQ12121 372 aa4.34□□□□□ -1.72
UBP9YER098W UTP23Q12339 254 aaKnown RBP4.34□□□□□ -1.72
UBP9YER098W YCR024C-BQ3E7Z8 88 aa4.34□□□□□ -1.72
UBP9YER098W INO4P13902 151 aa4.33□□□□□ -1.72
UBP9YER098W MDM10P18409 493 aa4.33□□□□□ -1.72
UBP9YER098W AHT1P29589 182 aa4.33□□□□□ -1.72
UBP9YER098W SPS18P32572 300 aa4.33□□□□□ -1.72
UBP9YER098W UGX2P32772 223 aa4.33□□□□□ -1.72
UBP9YER098W BOR1P53838 576 aa4.33□□□□□ -1.72
UBP9YER098W YPL039WQ03080 316 aa4.33□□□□□ -1.72
UBP9YER098W ARC18Q05933 178 aaKnown RBP4.33□□□□□ -1.72
UBP9YER098W FRE8Q12209 686 aa4.33□□□□□ -1.72
UBP9YER098W YLR363W-AQ3E747 85 aa4.33□□□□□ -1.72
UBP9YER098W MSB2P32334 1306 aa4.33□□□□□ -1.72
UBP9YER098W CDC39P25655 2108 aaKnown RBP4.33□□□□□ -1.72
UBP9YER098W YFL068WP0CX99 160 aa4.33□□□□□ -1.72
UBP9YER098W YLL066W-AP0CY00 160 aa4.33□□□□□ -1.72
UBP9YER098W YLL067W-AP0CY01 160 aa4.33□□□□□ -1.72
UBP9YER098W DAL82P21705 255 aa4.33□□□□□ -1.72
UBP9YER098W PPA2P28239 310 aa4.33□□□□□ -1.72
UBP9YER098W MRP49P32388 137 aa4.33□□□□□ -1.72
UBP9YER098W TIM12P32830 109 aa4.33□□□□□ -1.72
UBP9YER098W SWD2P36104 329 aaPredicted RBP4.33□□□□□ -1.72
UBP9YER098W TRM7P38238 310 aaKnown RBP4.33□□□□□ -1.72
UBP9YER098W YIL169CP40442 995 aa4.33□□□□□ -1.72
UBP9YER098W BRR6P53062 197 aa4.33□□□□□ -1.72
UBP9YER098W PBP4Q07362 185 aaKnown RBP4.33□□□□□ -1.72
UBP9YER098W STE7P06784 515 aa4.32□□□□□ -1.72
UBP9YER098W POX1P13711 748 aa4.32□□□□□ -1.72
UBP9YER098W YKR070WP36151 352 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W YHL026CP38740 315 aa4.32□□□□□ -1.72
UBP9YER098W YER085CP40058 173 aa4.32□□□□□ -1.72
UBP9YER098W YCH1P42937 148 aa4.32□□□□□ -1.72
UBP9YER098W KEG1P43614 200 aa4.32□□□□□ -1.72
UBP9YER098W EAF6P47128 113 aa4.32□□□□□ -1.72
UBP9YER098W YLR152CP54072 576 aa4.32□□□□□ -1.72
UBP9YER098W ISD11Q6Q560 94 aa4.32□□□□□ -1.72
UBP9YER098W RPL35AP0CX84 120 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W RPL35BP0CX85 120 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W HYP2P23301 157 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W TIR2P33890 251 aa4.32□□□□□ -1.72
UBP9YER098W ECM33P38248 429 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W GGC1P38988 300 aa4.32□□□□□ -1.72
UBP9YER098W CAB4P53332 305 aa4.32□□□□□ -1.72
UBP9YER098W MSO1P53604 210 aaKnown RBP4.32□□□□□ -1.72
UBP9YER098W YOR105WQ08504 108 aa4.32□□□□□ -1.72
UBP9YER098W CTA1P15202 515 aa4.31□□□□□ -1.72
UBP9YER098W YSR3P23501 404 aa4.31□□□□□ -1.72
UBP9YER098W XPT1P47165 209 aa4.31□□□□□ -1.72
UBP9YER098W YGL235WP53071 178 aa4.31□□□□□ -1.72
UBP9YER098W DYN2Q02647 92 aa4.31□□□□□ -1.72
UBP9YER098W SEC4P07560 215 aaKnown RBP4.3□□□□□ -1.72
UBP9YER098W ERG2P32352 222 aa4.3□□□□□ -1.72
UBP9YER098W GPX1P36014 167 aa4.3□□□□□ -1.72
UBP9YER098W YMR181CQ03231 154 aa4.3□□□□□ -1.72
UBP9YER098W PRP11Q07350 266 aaPredicted RBP4.3□□□□□ -1.72
UBP9YER098W CUP2P15315 225 aa4.3□□□□□ -1.72
UBP9YER098W GEP5Q12393 293 aa4.3□□□□□ -1.72
UBP9YER098W FOL3Q12676 427 aaPredicted RBP4.3□□□□□ -1.72
UBP9YER098W SOD1P00445 154 aaKnown RBP4.29□□□□□ -1.72
UBP9YER098W YHR130CP38834 111 aa4.29□□□□□ -1.72
UBP9YER098W YHR138CP38841 114 aaPredicted RBP4.29□□□□□ -1.72
UBP9YER098W YIL163CP40448 117 aa4.29□□□□□ -1.72
UBP9YER098W ERJ5P43613 295 aaPredicted RBP4.29□□□□□ -1.72
UBP9YER098W CRH1P53301 507 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms