RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SEC59P20048 519 aa6.26□□□□□ -1.41
PUP3YER094C RPS0AP32905 252 aaKnown RBP6.26□□□□□ -1.41
PUP3YER094C PRS4P38063 326 aaPredicted RBP6.26□□□□□ -1.41
PUP3YER094C IMD2P38697 523 aaKnown RBP6.26□□□□□ -1.41
PUP3YER094C PET100P38958 111 aa6.26□□□□□ -1.41
PUP3YER094C LOC1P43586 204 aaPredicted RBP6.26□□□□□ -1.41
PUP3YER094C TY1A-JR2P47099 440 aa6.26□□□□□ -1.41
PUP3YER094C DSK2P48510 373 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-DR1Q03856 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-ML1Q04706 440 aaKnown RBP6.26□□□□□ -1.41
PUP3YER094C YOR352WQ08816 343 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-BRQ12217 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-NL2Q12470 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-GR2Q12485 440 aa6.26□□□□□ -1.41
PUP3YER094C PET494P07390 489 aaPredicted RBP6.25□□□□□ -1.41
PUP3YER094C HMX1P32339 317 aa6.25□□□□□ -1.41
PUP3YER094C TRS20P38334 175 aa6.25□□□□□ -1.41
PUP3YER094C YNR071CP53757 342 aa6.25□□□□□ -1.41
PUP3YER094C YML108WQ03759 105 aa6.25□□□□□ -1.41
PUP3YER094C LOA1Q06508 300 aa6.25□□□□□ -1.41
PUP3YER094C HSP12P22943 109 aaKnown RBP6.24□□□□□ -1.41
PUP3YER094C MRPL4P36517 319 aa6.24□□□□□ -1.41
PUP3YER094C SFT2P38166 215 aa6.24□□□□□ -1.41
PUP3YER094C CPD1P53314 239 aa6.24□□□□□ -1.41
PUP3YER094C SWT21P53873 357 aaPredicted RBP6.24□□□□□ -1.41
PUP3YER094C LRS4Q04087 347 aaKnown RBP6.24□□□□□ -1.41
PUP3YER094C YOR097CQ12274 175 aaPredicted RBP6.24□□□□□ -1.41
PUP3YER094C RPS22AP0C0W1 130 aaKnown RBP6.23□□□□□ -1.41
PUP3YER094C LAC1P28496 418 aa6.23□□□□□ -1.41
PUP3YER094C PGD1P40356 397 aa6.23□□□□□ -1.41
PUP3YER094C PHS1P40857 217 aa6.23□□□□□ -1.41
PUP3YER094C HST4P53688 370 aa6.23□□□□□ -1.41
PUP3YER094C SPG4Q04438 115 aa6.23□□□□□ -1.41
PUP3YER094C ERV2Q12284 196 aa6.23□□□□□ -1.41
PUP3YER094C ADH3P07246 375 aaKnown RBP6.22□□□□□ -1.41
PUP3YER094C INO2P26798 304 aa6.22□□□□□ -1.41
PUP3YER094C POP5P28005 173 aa6.22□□□□□ -1.41
PUP3YER094C YCR041WP37265 110 aa6.22□□□□□ -1.41
PUP3YER094C SNU13P39990 126 aaKnown RBP6.22□□□□□ -1.41
PUP3YER094C TOS8P53147 276 aa6.22□□□□□ -1.41
PUP3YER094C TIM21P53220 239 aa6.22□□□□□ -1.41
PUP3YER094C HOR7Q05827 59 aa6.22□□□□□ -1.41
PUP3YER094C ZEO1Q08245 113 aa6.22□□□□□ -1.41
PUP3YER094C RNA15P25299 296 aaPredicted RBP6.21□□□□□ -1.42
PUP3YER094C AFR1P33304 620 aa6.21□□□□□ -1.42
PUP3YER094C NTF2P33331 125 aaKnown RBP6.21□□□□□ -1.42
PUP3YER094C MRPS9P38120 278 aa6.21□□□□□ -1.42
PUP3YER094C ATG8P38182 117 aaRIP-Chip data6.21□□□□□ -1.42not detected
PUP3YER094C LSM2P38203 95 aaKnown RBP6.21□□□□□ -1.42
PUP3YER094C VMA21P41806 77 aa6.21□□□□□ -1.42
PUP3YER094C VPS55P47111 140 aa6.21□□□□□ -1.42
PUP3YER094C MOG1P47123 218 aa6.21□□□□□ -1.42
PUP3YER094C BNS1P50084 137 aa6.21□□□□□ -1.42
PUP3YER094C CAB4P53332 305 aa6.21□□□□□ -1.42
PUP3YER094C DUG3P53871 357 aa6.21□□□□□ -1.42
PUP3YER094C YMR181CQ03231 154 aa6.21□□□□□ -1.42
PUP3YER094C LDS2Q08218 356 aa6.21□□□□□ -1.42
PUP3YER094C AYT1Q12226 474 aa6.21□□□□□ -1.42
PUP3YER094C YPR145C-AQ2V2P0 78 aa6.21□□□□□ -1.42
PUP3YER094C PHD1P36093 366 aa6.2□□□□□ -1.42
PUP3YER094C CYB5P40312 120 aa6.2□□□□□ -1.42
PUP3YER094C HIT1P46973 164 aa6.2□□□□□ -1.42
PUP3YER094C YGR219WP53307 113 aa6.2□□□□□ -1.42
PUP3YER094C TIM18Q08749 192 aa6.2□□□□□ -1.42
PUP3YER094C FIT2Q08906 153 aa6.2□□□□□ -1.42
PUP3YER094C CYC3P06182 269 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-LR4P0C2I8 440 aaKnown RBP6.19□□□□□ -1.42
PUP3YER094C YHR213WP0CI67 198 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-DR6P0CX70 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-ER1P0CX71 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-LR2P0CX72 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-PLP0CX73 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-JR1P0CX74 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-LR3P0CX75 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-ML2P0CX76 440 aa6.19□□□□□ -1.42
PUP3YER094C RPB3P16370 318 aaKnown RBP6.19□□□□□ -1.42
PUP3YER094C COQ3P27680 312 aa6.19□□□□□ -1.42
PUP3YER094C NNK1P36003 928 aa6.19□□□□□ -1.42
PUP3YER094C YIL163CP40448 117 aa6.19□□□□□ -1.42
PUP3YER094C POR2P40478 281 aa6.19□□□□□ -1.42
PUP3YER094C YJL027CP47063 138 aaPredicted RBP6.19□□□□□ -1.42
PUP3YER094C HHO1P53551 258 aa6.19□□□□□ -1.42
PUP3YER094C OCA2P53949 197 aa6.19□□□□□ -1.42
PUP3YER094C DAD3P69850 94 aa6.19□□□□□ -1.42
PUP3YER094C MRX11Q03079 207 aa6.19□□□□□ -1.42
PUP3YER094C YML122CQ03207 126 aa6.19□□□□□ -1.42
PUP3YER094C NAT3Q06504 195 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-GR1Q12085 440 aa6.19□□□□□ -1.42
PUP3YER094C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.19□□□□□ -1.42
PUP3YER094C TY1A-OLQ92392 440 aaKnown RBP6.19□□□□□ -1.42
PUP3YER094C YLR302CO13544 120 aa6.18□□□□□ -1.42
PUP3YER094C TIR2P33890 251 aa6.18□□□□□ -1.42
PUP3YER094C MIC12P38341 106 aa6.18□□□□□ -1.42
PUP3YER094C YHR173CP38864 112 aa6.18□□□□□ -1.42
PUP3YER094C YIL077CP40508 320 aa6.18□□□□□ -1.42
PUP3YER094C IMP2P46972 177 aa6.18□□□□□ -1.42
PUP3YER094C YDL186WP48568 277 aa6.18□□□□□ -1.42
PUP3YER094C RAV2Q03956 351 aa6.18□□□□□ -1.42
PUP3YER094C COX2P00410 251 aa6.17□□□□□ -1.42
PUP3YER094C ICS2P38284 255 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms