RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	TY1A-PR2	P0CX60	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-DR5	P0CX65	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-ER2	P0CX66	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-GR3	P0CX67	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-LR1	P0CX68	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-MR2	P0CX69	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	MRP2	P10663	115 aa	Predicted RBP	5.77	□□□□□ -1.49
SKP1	YDR328C	RRT1	P38192	103 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-JR2	P47099	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	SWT21	P53873	357 aa	Predicted RBP	5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-DR1	Q03856	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-ML1	Q04706	440 aa	Known RBP	5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-BR	Q12217	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-NL2	Q12470	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-GR2	Q12485	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	POP5	P28005	173 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	POG1	P40473	351 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	PHS1	P40857	217 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	RTS2	P40962	232 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	ATG27	P46989	271 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	VPS55	P47111	140 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	DSK2	P48510	373 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	HST4	P53688	370 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	SNO1	Q03144	224 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	SDH7	Q04401	133 aa		5.76	□□□□□ -1.49
SKP1	YDR328C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
SKP1	YDR328C	YCR041W	P37265	110 aa		5.75	□□□□□ -1.49
SKP1	YDR328C	SFT2	P38166	215 aa		5.75	□□□□□ -1.49
SKP1	YDR328C	TRS20	P38334	175 aa		5.75	□□□□□ -1.49
SKP1	YDR328C	FYV6	P53913	173 aa		5.75	□□□□□ -1.49
SKP1	YDR328C	CYC3	P06182	269 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	YHR213W	P0CI67	198 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	YKL075C	P36083	450 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	MIC12	P38341	106 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	GLE2	P40066	365 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	IMP2	P46972	177 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	YJL027C	P47063	138 aa	Predicted RBP	5.74	□□□□□ -1.49
SKP1	YDR328C	BNS1	P50084	137 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	CPD1	P53314	239 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	DUG3	P53871	357 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	OCA2	P53949	197 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	HOR7	Q05827	59 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	TIM18	Q08749	192 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	AYT1	Q12226	474 aa		5.74	□□□□□ -1.49
SKP1	YDR328C	SEC59	P20048	519 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	RNA15	P25299	296 aa	Predicted RBP	5.73	□□□□□ -1.49
SKP1	YDR328C	AFR1	P33304	620 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	LSM2	P38203	95 aa	Known RBP	5.73	□□□□□ -1.49
SKP1	YDR328C	ICS2	P38284	255 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	YNL194C	P40169	301 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	CAB4	P53332	305 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	YNR071C	P53757	342 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	MSA1	Q08471	629 aa		5.73	□□□□□ -1.49
SKP1	YDR328C	HSP12	P22943	109 aa	Known RBP	5.72	□□□□□ -1.49
SKP1	YDR328C	RPS2	P25443	254 aa	Known RBP	5.72	□□□□□ -1.49
SKP1	YDR328C	YNK1	P36010	153 aa	Known RBP	5.72	□□□□□ -1.49
SKP1	YDR328C	IMD2	P38697	523 aa	Known RBP	5.72	□□□□□ -1.49
SKP1	YDR328C	TIM21	P53220	239 aa		5.72	□□□□□ -1.49
SKP1	YDR328C	LOA1	Q06508	300 aa		5.72	□□□□□ -1.49
SKP1	YDR328C	FIT2	Q08906	153 aa		5.72	□□□□□ -1.49
SKP1	YDR328C	YIL002W-A	Q3E7Z5	69 aa		5.72	□□□□□ -1.49
SKP1	YDR328C	RPS22A	P0C0W1	130 aa	Known RBP	5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.71	□□□□□ -1.5
SKP1	YDR328C	DDI2	P0CH63	225 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	DDI3	P0CH64	225 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-DR6	P0CX70	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-ER1	P0CX71	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-LR2	P0CX72	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-PL	P0CX73	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-JR1	P0CX74	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-LR3	P0CX75	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-ML2	P0CX76	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	COQ3	P27680	312 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	LAC1	P28496	418 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	POR2	P40478	281 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	FIP1	P45976	327 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	MRX11	Q03079	207 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	LDS2	Q08218	356 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-GR1	Q12085	440 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	MRPL23	Q12487	163 aa	Predicted RBP	5.71	□□□□□ -1.5
SKP1	YDR328C	YPR145C-A	Q2V2P0	78 aa		5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.71	□□□□□ -1.5
SKP1	YDR328C	TY1A-OL	Q92392	440 aa	Known RBP	5.71	□□□□□ -1.5
SKP1	YDR328C	ADH3	P07246	375 aa	Known RBP	5.7	□□□□□ -1.5
SKP1	YDR328C	HMX1	P32339	317 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	NTF2	P33331	125 aa	Known RBP	5.7	□□□□□ -1.5
SKP1	YDR328C	PRY2	P36110	329 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	YHR173C	P38864	112 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	SNU13	P39990	126 aa	Known RBP	5.7	□□□□□ -1.5
SKP1	YDR328C	CYB5	P40312	120 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	TOS8	P53147	276 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	HHO1	P53551	258 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	MOT3	P54785	490 aa	Known RBP	5.7	□□□□□ -1.5
SKP1	YDR328C	YMR181C	Q03231	154 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	DXO1	Q06349	442 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	YLR118C	Q12354	227 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	LAS17	Q12446	633 aa		5.7	□□□□□ -1.5
SKP1	YDR328C	ERS1	P17261	260 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	NNK1	P36003	928 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	MRPL4	P36517	319 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms