RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C Q0255P03881 472 aa1.36□□□□□ -2.19
MSH6YDR097C PUT1P09368 476 aa1.36□□□□□ -2.19
MSH6YDR097C RPB3P16370 318 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C SNF6P18888 332 aa1.36□□□□□ -2.19
MSH6YDR097C ATG8P38182 117 aaRIP-Chip data1.36□□□□□ -2.19not detected
MSH6YDR097C SEC72P39742 193 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C EDC2P40023 145 aaPredicted RBP1.36□□□□□ -2.19
MSH6YDR097C HMF1P40037 129 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C YER121WP40076 114 aa1.36□□□□□ -2.19
MSH6YDR097C CAT5P41735 233 aa1.36□□□□□ -2.19
MSH6YDR097C PFS2P42841 465 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C DAN1P47178 298 aa1.36□□□□□ -2.19
MSH6YDR097C PGA1P53896 198 aa1.36□□□□□ -2.19
MSH6YDR097C YML122CQ03207 126 aa1.36□□□□□ -2.19
MSH6YDR097C YMR244WQ04018 355 aa1.36□□□□□ -2.19
MSH6YDR097C NMA1Q06178 401 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C KEI1Q06346 221 aa1.36□□□□□ -2.19
MSH6YDR097C BRX1Q08235 291 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C YDL211CQ12121 372 aa1.36□□□□□ -2.19
MSH6YDR097C PST1Q12355 444 aa1.36□□□□□ -2.19
MSH6YDR097C AGA2P32781 87 aa1.36□□□□□ -2.19
MSH6YDR097C SOL2P37262 315 aa1.36□□□□□ -2.19
MSH6YDR097C IGD1P43598 195 aa1.36□□□□□ -2.19
MSH6YDR097C RSM27P53305 110 aa1.36□□□□□ -2.19
MSH6YDR097C RNH201P53942 307 aa1.36□□□□□ -2.19
MSH6YDR097C YDC1Q02896 317 aa1.36□□□□□ -2.19
MSH6YDR097C MRX11Q03079 207 aa1.36□□□□□ -2.19
MSH6YDR097C ELP6Q04868 273 aa1.36□□□□□ -2.19
MSH6YDR097C MRX8Q05473 314 aa1.36□□□□□ -2.19
MSH6YDR097C RNH202Q05635 350 aa1.36□□□□□ -2.19
MSH6YDR097C YPR147CQ06522 304 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C NIP7Q08962 181 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C YLR099W-AQ3E798 87 aa1.36□□□□□ -2.19
MSH6YDR097C YDL085C-AQ3E7B7 68 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C YPR096CO13587 100 aa1.36□□□□□ -2.19
MSH6YDR097C RPS28BP0C0X0 67 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C MAG1P22134 296 aaKnown RBP1.36□□□□□ -2.19
MSH6YDR097C SDH4P37298 181 aa1.36□□□□□ -2.19
MSH6YDR097C GPI18P38211 433 aa1.36□□□□□ -2.19
MSH6YDR097C GCV3P39726 170 aaPredicted RBP1.36□□□□□ -2.19
MSH6YDR097C ICE2P40499 491 aa1.36□□□□□ -2.19
MSH6YDR097C YGR201CP42936 225 aa1.36□□□□□ -2.19
MSH6YDR097C AIM25P47140 327 aa1.36□□□□□ -2.19
MSH6YDR097C SLX9P53251 210 aaPredicted RBP1.36□□□□□ -2.19
MSH6YDR097C YNL184CP53876 108 aa1.36□□□□□ -2.19
MSH6YDR097C YLR460CP54007 376 aa1.36□□□□□ -2.19
MSH6YDR097C YPL039WQ03080 316 aa1.36□□□□□ -2.19
MSH6YDR097C EST3Q03096 181 aa1.36□□□□□ -2.19
MSH6YDR097C YDR248CQ03786 193 aa1.36□□□□□ -2.19
MSH6YDR097C GEP5Q12393 293 aa1.36□□□□□ -2.19
MSH6YDR097C RDI1Q12434 202 aa1.36□□□□□ -2.19
MSH6YDR097C CMC2Q3E7A4 109 aa1.36□□□□□ -2.19
MSH6YDR097C RPS28AQ3E7X9 67 aaPredicted RBP1.36□□□□□ -2.19
MSH6YDR097C YHR214C-EQ8TGK0 99 aa1.36□□□□□ -2.19
MSH6YDR097C YCR101CP25607 182 aa1.35□□□□□ -2.19
MSH6YDR097C SFK1P35735 353 aa1.35□□□□□ -2.19
MSH6YDR097C YHR127WP38833 243 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C YEL073CP39974 107 aa1.35□□□□□ -2.19
MSH6YDR097C RRT13P40042 185 aa1.35□□□□□ -2.19
MSH6YDR097C PGD1P40356 397 aa1.35□□□□□ -2.19
MSH6YDR097C COQ5P49017 307 aa1.35□□□□□ -2.19
MSH6YDR097C YGL235WP53071 178 aa1.35□□□□□ -2.19
MSH6YDR097C GRX8Q05926 109 aa1.35□□□□□ -2.19
MSH6YDR097C MCH1Q07376 486 aa1.35□□□□□ -2.19
MSH6YDR097C MCP1Q12106 302 aa1.35□□□□□ -2.19
MSH6YDR097C ATO3Q12359 275 aa1.35□□□□□ -2.19
MSH6YDR097C ISD11Q6Q560 94 aa1.35□□□□□ -2.19
MSH6YDR097C FMP27Q06179 2628 aa1.35□□□□□ -2.19
MSH6YDR097C CDC39P25655 2108 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C CPT1P17898 393 aa1.35□□□□□ -2.19
MSH6YDR097C OCH1P31755 480 aa1.35□□□□□ -2.19
MSH6YDR097C CLB6P32943 380 aa1.35□□□□□ -2.19
MSH6YDR097C SSS1P35179 80 aa1.35□□□□□ -2.19
MSH6YDR097C PAU24P38155 120 aa1.35□□□□□ -2.19
MSH6YDR097C COS8P38723 381 aa1.35□□□□□ -2.19
MSH6YDR097C AGE2P40529 298 aa1.35□□□□□ -2.19
MSH6YDR097C VMA21P41806 77 aa1.35□□□□□ -2.19
MSH6YDR097C ARP3P47117 449 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C YIP3P53633 176 aa1.35□□□□□ -2.19
MSH6YDR097C HSK3P69852 69 aa1.35□□□□□ -2.19
MSH6YDR097C BUD25P85052 153 aa1.35□□□□□ -2.19
MSH6YDR097C YMR253CQ04835 414 aa1.35□□□□□ -2.19
MSH6YDR097C SCW10Q04951 389 aa1.35□□□□□ -2.19
MSH6YDR097C SPC3Q12133 184 aa1.35□□□□□ -2.19
MSH6YDR097C YLR050CQ12155 161 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C YCL001W-BQ96VH2 84 aa1.35□□□□□ -2.19
MSH6YDR097C SCL1P21243 252 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C RSA4P25382 515 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C ERG24P32462 438 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C APS1P35181 156 aa1.35□□□□□ -2.19
MSH6YDR097C YPT52P36018 234 aaKnown RBP1.35□□□□□ -2.19
MSH6YDR097C SRP102P36057 244 aaPredicted RBP1.35□□□□□ -2.19
MSH6YDR097C YBR063CP38083 404 aa1.35□□□□□ -2.19
MSH6YDR097C RMD6P39975 231 aa1.35□□□□□ -2.19
MSH6YDR097C SOL1P50278 321 aa1.35□□□□□ -2.19
MSH6YDR097C YGL260WP53056 76 aa1.35□□□□□ -2.19
MSH6YDR097C YGL088WP53151 121 aa1.35□□□□□ -2.19
MSH6YDR097C SAY1P53324 424 aa1.35□□□□□ -2.19
MSH6YDR097C YNR062CP53748 327 aa1.35□□□□□ -2.19
MSH6YDR097C NOC4Q06512 552 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms